Aliases for ACSL3-AS1 Gene

Subcategory (RNA class) for ACSL3-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ACSL3-AS1 Gene

  • ACSL3 Antisense RNA 1 2 3
  • HSALNG0022557 167
  • NONHSAG030643 92
  • Lnc-FARSB-2 168
  • ACSL3-AS1 2

External Ids for ACSL3-AS1 Gene

Summaries for ACSL3-AS1 Gene

GeneCards Summary for ACSL3-AS1 Gene

ACSL3-AS1 (ACSL3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ACSL3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ACSL3-AS1 Gene

Genomics for ACSL3-AS1 Gene

GeneHancer (GH) Regulatory Elements for ACSL3-AS1 Gene

Promoters and enhancers for ACSL3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J222919 Enhancer 1 Ensembl ENCODE 500.7 +1.4 1449 2.4 POLR2G JUND FOS REST TRIM28 TOE1 MYC JUN OSR2 NCOR1 ACSL3-AS1 ENSG00000234193 ACSL3
GH02J222917 Enhancer 0.6 Ensembl 0.7 +3.8 3771 0.2 TEAD1 FOXA2 ZFHX2 FOXP1 BCL6 NFIL3 IKZF5 HLF NR2F6 SOX5 ENSG00000234193 ACSL3 ACSL3-AS1 ATG12P2
GH02J222939 Enhancer 0.7 ENCODE 0.4 -18.1 -18116 0.2 CTCF REST TGIF2 RAD21 TRIM22 SMC3 YY1 RBM22 SMAD4 ZGPAT lnc-KCNE4-7 ACSL3-AS1 ACSL3
GH02J222940 Enhancer 0.6 Ensembl 0.4 -18.4 -18428 0.2 CTCF TGIF2 TRIM22 SMC3 RBM22 ZGPAT ZNF654 GATAD1 REST MIER2 lnc-KCNE4-7 ACSL3-AS1 ACSL3
GH02J222927 Enhancer 0.4 Ensembl 0.4 -6.5 -6529 0.4 SRF RBM22 JUNB NFIC RUNX3 ACSL3-AS1 lnc-KCNE4-7 ACSL3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ACSL3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ACSL3-AS1 Gene

Genomic Locations for ACSL3-AS1 Gene
chr2:222,917,339-222,921,272
(GRCh38/hg38)
Size:
3,934 bases
Orientation:
Minus strand

Genomic View for ACSL3-AS1 Gene

Genes around ACSL3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACSL3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACSL3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACSL3-AS1 Gene

Proteins for ACSL3-AS1 Gene

Post-translational modifications for ACSL3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACSL3-AS1 Gene

Domains & Families for ACSL3-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ACSL3-AS1 Gene

Function for ACSL3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACSL3-AS1 Gene

Localization for ACSL3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACSL3-AS1 Gene

Pathways & Interactions for ACSL3-AS1 Gene

PathCards logo

SuperPathways for ACSL3-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ACSL3-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ACSL3-AS1 Gene

Drugs & Compounds for ACSL3-AS1 Gene

No Compound Related Data Available

Transcripts for ACSL3-AS1 Gene

mRNA/cDNA for ACSL3-AS1 Gene

2 RNACentral transcripts :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ACSL3-AS1 Gene

No ASD Table

Relevant External Links for ACSL3-AS1 Gene

GeneLoc Exon Structure for
ACSL3-AS1

Expression for ACSL3-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACSL3-AS1 Gene

Orthologs for ACSL3-AS1 Gene

No data available for Orthologs and Evolution for ACSL3-AS1 Gene

Paralogs for ACSL3-AS1 Gene

No data available for Paralogs for ACSL3-AS1 Gene

Variants for ACSL3-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ACSL3-AS1 Gene

SNP ID Clinical significance and condition Chr 02 pos Variation AA Info Type
724724 Likely Benign: not provided 222,919,191(-) A/G MISSENSE_VARIANT

Additional dbSNP identifiers (rs#s) for ACSL3-AS1 Gene

Additional Variant Information for ACSL3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACSL3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACSL3-AS1 Gene

Disorders for ACSL3-AS1 Gene

No disorders were found for ACSL3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ACSL3-AS1 Gene

Publications for ACSL3-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54

No data available for Mastermind for ACSL3-AS1 Gene

Products for ACSL3-AS1 Gene

Sources for ACSL3-AS1 Gene