Aliases for ACBD3-AS1 Gene

Subcategory (RNA class) for ACBD3-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for ACBD3-AS1 Gene

  • ACBD3 Antisense RNA 1 2 3 5
  • RP11-275I14.4 3
  • NONHSAG004471 94
  • HSALNG0011058 169
  • Lnc-H3F3A-2 170
  • ACBD3-AS1 2

External Ids for ACBD3-AS1 Gene

Previous GeneCards Identifiers for ACBD3-AS1 Gene

  • GC01U905666

Summaries for ACBD3-AS1 Gene

GeneCards Summary for ACBD3-AS1 Gene

ACBD3-AS1 (ACBD3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ACBD3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ACBD3-AS1 Gene

Genomics for ACBD3-AS1 Gene

GeneHancer (GH) Regulatory Elements for ACBD3-AS1 Gene

Promoters and enhancers for ACBD3-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ACBD3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ACBD3-AS1 Gene

Genomic Locations for ACBD3-AS1 Gene
chr1:226,133,384-226,155,072
(GRCh38/hg38)
Size:
21,689 bases
Orientation:
Plus strand
chr1:226,335,704-226,342,772
(GRCh37/hg19)
Size:
7,069 bases
Orientation:
Plus strand

Genomic View for ACBD3-AS1 Gene

Genes around ACBD3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACBD3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACBD3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACBD3-AS1 Gene

Proteins for ACBD3-AS1 Gene

Post-translational modifications for ACBD3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACBD3-AS1 Gene

Domains & Families for ACBD3-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ACBD3-AS1 Gene

Function for ACBD3-AS1 Gene

Phenotypes From GWAS Catalog for ACBD3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACBD3-AS1 Gene

Localization for ACBD3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACBD3-AS1 Gene

Pathways & Interactions for ACBD3-AS1 Gene

PathCards logo

SuperPathways for ACBD3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ACBD3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACBD3-AS1 Gene

Drugs & Compounds for ACBD3-AS1 Gene

No Compound Related Data Available

Transcripts for ACBD3-AS1 Gene

mRNA/cDNA for ACBD3-AS1 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(5) RNACentral transcripts :
(1) LNCipedia transcripts :
(2) NONCODE transcripts :
(2) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ACBD3-AS1 Gene

No ASD Table

Relevant External Links for ACBD3-AS1 Gene

GeneLoc Exon Structure for
ACBD3-AS1
ECgene alternative splicing isoforms for
ACBD3-AS1

Expression for ACBD3-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACBD3-AS1 Gene

Orthologs for ACBD3-AS1 Gene

Evolution for ACBD3-AS1 Gene

ENSEMBL:
Gene Tree for ACBD3-AS1 (if available)
TreeFam:
Gene Tree for ACBD3-AS1 (if available)

No data available for Orthologs for ACBD3-AS1 Gene

Paralogs for ACBD3-AS1 Gene

No data available for Paralogs for ACBD3-AS1 Gene

Variants for ACBD3-AS1 Gene

Sequence variations from dbSNP and Humsavar for ACBD3-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000828870 -- 226,154,476(+) T/C intron_variant
rs1000833370 -- 226,152,002(+) G/A intron_variant
rs1002315050 -- 226,148,954(+) T/C intron_variant
rs1002442787 -- 226,151,496(+) T/G intron_variant
rs1002449383 -- 226,148,625(+) T/C intron_variant

Additional Variant Information for ACBD3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACBD3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACBD3-AS1 Gene

Disorders for ACBD3-AS1 Gene

Additional Disease Information for ACBD3-AS1

No disorders were found for ACBD3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ACBD3-AS1 Gene

Publications for ACBD3-AS1 Gene

  1. Identification of long non-coding RNAs biomarkers associated with progression of endometrial carcinoma and patient outcomes. (PMID: 28881755) Sun Y … Mao Y (Oncotarget 2017) 2 3 56

Products for ACBD3-AS1 Gene

Sources for ACBD3-AS1 Gene