Aliases for AC011230 Gene

Subcategory (RNA class) for AC011230 Gene

scRNA

Number of RNA Genes sources:

1 / 17

Aliases for AC011230 Gene

No Aliases found

No data available for External Ids for AC011230 Gene

Summaries for AC011230 Gene

GeneCards Summary for AC011230 Gene

AC011230 is an RNA Gene, and is affiliated with the scRNA class.

Rfam classification for AC011230 Gene

Additional gene information for AC011230 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for AC011230 Gene

Genomics for AC011230 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AC011230 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J007105 Promoter 0.8 Ensembl 600.7 -0.6 -620 0.2 MTA2 PRDM1 CTCF BRD9 TRIM22 DPF2 ZNF444 YY1 NFIC RFX5 AC011230 ENSG00000201218 ENSG00000287860 C1GALT1 lnc-COL28A1-6 LOC105375138 LOC112267992
GH07J007104 Enhancer 0.7 ENCODE 600.7 -0.9 -864 0.2 CTCF MTA2 REST RAD21 BRD9 TRIM22 DPF2 ZNF444 YY1 SMC3 AC011230 ENSG00000201218 ENSG00000287860 C1GALT1 lnc-COL28A1-6 LOC105375138 LOC112267992
GH07J007098 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.7 +2.6 2588 2.2 GATAD2A TEAD4 RFX1 LEF1 IKZF1 JUND FOXA1 DDX20 PRDM1 MTA2 ENSG00000239696 C1GALT1 ENSG00000272732 AC011230 ENSG00000201218 ENSG00000287860 LOC100131257 lnc-COL28A1-6 LOC105375138 LOC112267992
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AC011230 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AC011230 Gene

Genomic Locations for AC011230 Gene
chr7:7,102,576-7,102,681
(GRCh38/hg38)
Size:
106 bases
Orientation:
Minus strand

Genomic View for AC011230 Gene

Genes around AC011230 on UCSC Golden Path with GeneCards custom track
AC011230 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AC011230 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AC011230 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AC011230 Gene

Proteins for AC011230 Gene

Post-translational modifications for AC011230 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AC011230 Gene

Domains & Families for AC011230 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AC011230 Gene

Function for AC011230 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AC011230 Gene

Localization for AC011230 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AC011230 Gene

Pathways & Interactions for AC011230 Gene

PathCards logo

SuperPathways for AC011230 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AC011230 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AC011230 Gene

Drugs & Compounds for AC011230 Gene

No Compound Related Data Available

Transcripts for AC011230 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AC011230 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000007CA8F_9606 scRNA 106 1

ENA: AC011230.3:23408..23513:ncRNA,

AC011230 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AC011230 Gene

No ASD Table

Relevant External Links for AC011230 Gene

GeneLoc Exon Structure for
AC011230

No data available for mRNA/cDNA for AC011230 Gene

Expression for AC011230 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AC011230 Gene

Orthologs for AC011230 Gene

No data available for Orthologs and Evolution for AC011230 Gene

Paralogs for AC011230 Gene

No data available for Paralogs for AC011230 Gene

Variants for AC011230 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AC011230 Gene

Disorders for AC011230 Gene

No disorders were found for AC011230 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AC011230 Gene

Publications for AC011230 Gene

No publications were found for AC011230 Gene.

No data available for Mastermind for AC011230 Gene

Products for AC011230 Gene

Sources for AC011230 Gene