Aliases for AC006023.2 Gene

Subcategory (RNA class) for AC006023.2 Gene

snoRNA

Number of RNA Genes sources:

2 / 17

Aliases for AC006023.2 Gene

  • AC006023.2 170
  • SNODB1396 177

No data available for External Ids for AC006023.2 Gene

Summaries for AC006023.2 Gene

GeneCards Summary for AC006023.2 Gene

AC006023.2 is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for AC006023.2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AC006023.2 Gene

Genomics for AC006023.2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AC006023.2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J040095 Enhancer 0.9 Ensembl ENCODE 0.4 -9.7 -9674 0.2 GATAD2A RCOR2 RXRB SP1 CEBPA SOX13 TCF7 ATF3 YY1 ZBTB33 lnc-SUGCT-5 AC006023.2 MPLKIP RF00017-6130 CDK13
GH07J040077 Enhancer 0.5 Ensembl 0.4 +7.8 7826 2 CEBPB GABPA MYC EP400 TRIM24 CEBPG ATF4 ATF3 BACH1 AC006023.2 piR-41405-067 MPLKIP RF00017-6130 CDK13
GH07J040052 Enhancer 0.7 Ensembl ENCODE 0.3 +33.3 33276 0.9 CTCF IKZF1 REST RAD21 SMC3 ZNF654 MAZ THRAP3 ZNF143 TRIM22 CDK13 piR-41405-067 AC006023.2 MPLKIP RF00017-6130
GH07J040089 Enhancer 0.3 FANTOM5 0.7 -4.4 -4413 0.7 ZSCAN4 AC006023.2 lnc-SUGCT-5 MPLKIP RF00017-6130 CDK13
GH07J040058 Enhancer 0.6 Ensembl 0.3 +26.7 26726 1 IKZF1 REST GATAD2B NFE2 ZNF316 MAFF ZBTB17 EP400 MAFG MAFK LINC00265 CDK13 piR-41405-067 AC006023.2 MPLKIP RF00017-6130
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AC006023.2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AC006023.2 Gene

Genomic Locations for AC006023.2 Gene
chr7:40,085,766-40,085,827
(GRCh38/hg38)
Size:
62 bases
Orientation:
Minus strand

Genomic View for AC006023.2 Gene

Genes around AC006023.2 on UCSC Golden Path with GeneCards custom track
AC006023.2 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AC006023.2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AC006023.2 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AC006023.2 Gene

Proteins for AC006023.2 Gene

Post-translational modifications for AC006023.2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AC006023.2 Gene

Domains & Families for AC006023.2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AC006023.2 Gene

Function for AC006023.2 Gene

Phenotypes From GWAS Catalog for AC006023.2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AC006023.2 Gene

Localization for AC006023.2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AC006023.2 Gene

Pathways & Interactions for AC006023.2 Gene

PathCards logo

SuperPathways for AC006023.2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AC006023.2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AC006023.2 Gene

Drugs & Compounds for AC006023.2 Gene

No Compound Related Data Available

Transcripts for AC006023.2 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AC006023.2 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000081F349_9606 snoRNA 62 2

snoDB: SNODB1396,

snOPY: Homo_sapiens300072,

AC006023.2 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AC006023.2 Gene

No ASD Table

Relevant External Links for AC006023.2 Gene

GeneLoc Exon Structure for
AC006023.2

No data available for mRNA/cDNA for AC006023.2 Gene

Expression for AC006023.2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AC006023.2 Gene

Orthologs for AC006023.2 Gene

No data available for Orthologs and Evolution for AC006023.2 Gene

Paralogs for AC006023.2 Gene

No data available for Paralogs for AC006023.2 Gene

Variants for AC006023.2 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AC006023.2 Gene

Disorders for AC006023.2 Gene

No disorders were found for AC006023.2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AC006023.2 Gene

Publications for AC006023.2 Gene

No publications were found for AC006023.2 Gene.

No data available for Mastermind for AC006023.2 Gene

Products for AC006023.2 Gene

Sources for AC006023.2 Gene