Aliases for AC005088-003 Gene

Subcategory (RNA class) for AC005088-003 Gene

rRNA

Number of RNA Genes sources:

1 / 17

Aliases for AC005088-003 Gene

No Aliases found

No data available for External Ids for AC005088-003 Gene

Summaries for AC005088-003 Gene

GeneCards Summary for AC005088-003 Gene

AC005088-003 is an RNA Gene, and is affiliated with the rRNA class.

Additional gene information for AC005088-003 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AC005088-003 Gene

Genomics for AC005088-003 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AC005088-003 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J102328 Enhancer 0.5 Ensembl 0.7 -3.1 -3106 1.4 RNF2 ZNF512 CEBPA CEBPB NFIC CEBPG NFIA SMARCA4 GABPB1 LOC107986717 NONHSAG048420.2 ENSG00000170409 SH2B2 ENSG00000252824 AC005088-003 RF00017-6525 SPDYE6 RF00017-6523
GH07J102327 Enhancer 0.4 FANTOM5 0.7 -2.1 -2060 0.4 RNF2 ZNF512 SMARCA4 SH2B2 ORAI2 ENSG00000252824 PRKRIP1 AC005088-003 LOC107986717 NONHSAG048420.2 ENSG00000170409 RF00017-6525 SPDYE6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AC005088-003 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AC005088-003 Gene

Genomic Locations for AC005088-003 Gene
chr7:102,325,070-102,325,195
(GRCh38/hg38)
Size:
126 bases
Orientation:
Minus strand

Genomic View for AC005088-003 Gene

Genes around AC005088-003 on UCSC Golden Path with GeneCards custom track
AC005088-003 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AC005088-003 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AC005088-003 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AC005088-003 Gene

Proteins for AC005088-003 Gene

Post-translational modifications for AC005088-003 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AC005088-003 Gene

Domains & Families for AC005088-003 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AC005088-003 Gene

Function for AC005088-003 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AC005088-003 Gene

Localization for AC005088-003 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AC005088-003 Gene

Pathways & Interactions for AC005088-003 Gene

PathCards logo

SuperPathways for AC005088-003 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AC005088-003 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AC005088-003 Gene

Drugs & Compounds for AC005088-003 Gene

No Compound Related Data Available

Transcripts for AC005088-003 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AC005088-003 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001EA3B5_9606 rRNA 126 1

ENA: AC005088.3:117152..117277:rRNA,

AC005088-003 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AC005088-003 Gene

No ASD Table

Relevant External Links for AC005088-003 Gene

GeneLoc Exon Structure for
AC005088-003

No data available for mRNA/cDNA for AC005088-003 Gene

Expression for AC005088-003 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AC005088-003 Gene

Orthologs for AC005088-003 Gene

No data available for Orthologs and Evolution for AC005088-003 Gene

Paralogs for AC005088-003 Gene

No data available for Paralogs for AC005088-003 Gene

Variants for AC005088-003 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AC005088-003 Gene

Disorders for AC005088-003 Gene

No disorders were found for AC005088-003 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AC005088-003 Gene

Publications for AC005088-003 Gene

No publications were found for AC005088-003 Gene.

No data available for Mastermind for AC005088-003 Gene

Products for AC005088-003 Gene

Sources for AC005088-003 Gene