Aliases for AC004884 Gene

Subcategory (RNA class) for AC004884 Gene

rRNA

Number of RNA Genes sources:

1 / 14

Aliases for AC004884 Gene

No Aliases found

No data available for External Ids for AC004884 Gene

Summaries for AC004884 Gene

GeneCards Summary for AC004884 Gene

AC004884 is an RNA Gene, and is affiliated with the rRNA class.

Additional gene information for AC004884 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AC004884 Gene

Genomics for AC004884 Gene

GeneHancer (GH) Regulatory Elements for AC004884 Gene

Promoters and enhancers for AC004884 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J105325 Enhancer 0.5 ENCODE dbSUPER 500.7 -0.4 -442 0.2 ZNF384 BHLHE40 AC004884 ENSG00000242154 SRPK2 lnc-SRPK2-5
GH07J105327 Enhancer 0.4 dbSUPER 500.7 +1.9 1903 1.5 ZBTB17 ZNF18 ZNF770 AC004884 SRPK2 RNU6-1322P RF00026-1029 lnc-SRPK2-5
GH07J105303 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -18.3 -18279 8.1 SP1 FOS TRIM28 CUX1 MEF2C ATF2 ZKSCAN8 OSR2 ZNF316 FOXA2 KMT2E RNU6-1322P ATXN7L1 LINC01004 SRPK2 ENSG00000237513 ENSG00000242154 AC004884 lnc-SRPK2-5
GH07J105319 Enhancer 0.8 FANTOM5 ENCODE 0.4 -6.1 -6088 0.3 ZBTB40 ZNF384 NBN ELF1 POLR2A TBP SPI1 ZNF687 MTA2 GABPA SRPK2 KMT2E AC004884 ENSG00000242154 lnc-SRPK2-5
GH07J105330 Enhancer 0.7 Ensembl dbSUPER 0.4 +5.1 5149 0.8 GLIS1 KLF1 BHLHE40 EGR2 ZNF362 RAD51 ZNF770 RNU6-1322P RF00026-1029 SRPK2 AC004884 lnc-SRPK2-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AC004884 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AC004884 Gene

Genomic Locations for AC004884 Gene
chr7:105,325,851-105,326,053
(GRCh38/hg38)
Size:
203 bases
Orientation:
Plus strand

Genomic View for AC004884 Gene

Genes around AC004884 on UCSC Golden Path with GeneCards custom track

AC004884 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AC004884 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AC004884 Gene

Proteins for AC004884 Gene

Post-translational modifications for AC004884 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AC004884 Gene

Domains & Families for AC004884 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AC004884 Gene

Function for AC004884 Gene

miRNA for AC004884 Gene

miRTarBase miRNAs that target AC004884

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for AC004884 Gene

Localization for AC004884 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AC004884 Gene

Pathways & Interactions for AC004884 Gene

PathCards logo

SuperPathways for AC004884 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for AC004884 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AC004884 Gene

Drugs & Compounds for AC004884 Gene

No Compound Related Data Available

Transcripts for AC004884 Gene

mRNA/cDNA for AC004884 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for AC004884 Gene

No ASD Table

Relevant External Links for AC004884 Gene

GeneLoc Exon Structure for
AC004884

Expression for AC004884 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AC004884 Gene

Orthologs for AC004884 Gene

No data available for Orthologs and Evolution for AC004884 Gene

Paralogs for AC004884 Gene

No data available for Paralogs for AC004884 Gene

Variants for AC004884 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AC004884 Gene

Disorders for AC004884 Gene

No disorders were found for AC004884 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AC004884 Gene

Publications for AC004884 Gene

No publications were found for AC004884 Gene.

No data available for Mastermind for AC004884 Gene

Products for AC004884 Gene

Sources for AC004884 Gene