AC004878-010 Gene (RNA Gene)

 

GC07P077065
GIFtS:
2
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Aliases for AC004878-010 Gene

Subcategory (RNA class) for AC004878-010 Gene

scRNA

Number of RNA Genes sources:

1 / 17

Aliases for AC004878-010 Gene

No Aliases found

Previous GeneCards Identifiers for AC004878-010 Gene

  • GC07P077042

No data available for External Ids for AC004878-010 Gene

Summaries for AC004878-010 Gene

GeneCards Summary for AC004878-010 Gene

AC004878-010 is an RNA Gene, and is affiliated with the scRNA class.

Rfam classification for AC004878-010 Gene

Additional gene information for AC004878-010 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for AC004878-010 Gene

Genomics for AC004878-010 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for AC004878-010 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH07J077040 Promoter 0.3 EPDnew 600.7 -1.6 -1575 0.1 AC004878-010 ENSG00000259628 PMS2P9 piR-42028-010 ENSG00000201959 CCDC146 SPDYE18 SPDYE17 DTX2P1-UPK3BP1-PMS2P11 POMZP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AC004878-010 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AC004878-010 Gene

Genomic Locations for AC004878-010 Gene
chr7:77,041,647-77,041,742
(GRCh38/hg38)
Size:
96 bases
Orientation:
Plus strand

Genomic View for AC004878-010 Gene

Genes around AC004878-010 on UCSC Golden Path with GeneCards custom track
AC004878-010 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AC004878-010 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AC004878-010 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AC004878-010 Gene

Proteins for AC004878-010 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for AC004878-010 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AC004878-010 Gene

Domains & Families for AC004878-010 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AC004878-010 Gene

Function for AC004878-010 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AC004878-010 Gene

Localization for AC004878-010 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AC004878-010 Gene

Pathways & Interactions for AC004878-010 Gene

PathCards logo

SuperPathways for AC004878-010 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AC004878-010 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AC004878-010 Gene

Drugs & Compounds for AC004878-010 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for AC004878-010 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AC004878-010 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000029DE41_9606 scRNA 96 1

ENA: AC004878.3:36220..36315:ncRNA, AC004878.3:8195..8290:ncRNA, AC007000.2:18245..18340:ncRNA, AC114737.3:87408..87503:ncRNA,

AC004878-010 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AC004878-010 Gene

No ASD Table

Relevant External Links for AC004878-010 Gene

GeneLoc Exon Structure for
AC004878-010

No data available for mRNA/cDNA for AC004878-010 Gene

Expression for AC004878-010 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AC004878-010 Gene

Orthologs for AC004878-010 Gene

No data available for Orthologs and Evolution for AC004878-010 Gene

Paralogs for AC004878-010 Gene

No data available for Paralogs for AC004878-010 Gene

Variants for AC004878-010 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AC004878-010 Gene

Disorders for AC004878-010 Gene

No disorders were found for AC004878-010 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AC004878-010 Gene

Publications for AC004878-010 Gene

No publications were found for AC004878-010 Gene.

No data available for Mastermind for AC004878-010 Gene

Products for AC004878-010 Gene

Sources for AC004878-010 Gene