Aliases for AC004878-009 Gene

Subcategory (RNA class) for AC004878-009 Gene

scRNA

Number of RNA Genes sources:

1 / 17

Aliases for AC004878-009 Gene

No Aliases found

No data available for External Ids for AC004878-009 Gene

Summaries for AC004878-009 Gene

GeneCards Summary for AC004878-009 Gene

AC004878-009 is an RNA Gene, and is affiliated with the scRNA class.

Rfam classification for AC004878-009 Gene

Additional gene information for AC004878-009 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for AC004878-009 Gene

Genomics for AC004878-009 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AC004878-009 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J077014 Enhancer 0.2 Ensembl 600.7 +0.6 618 0.4 piR-45129-010 AC004878-009 piR-51403-009 piR-61530-008 piR-42028-009 ENSG00000201885 PMS2P11 SPDYE18 ENSG00000283398 DTX2P1-UPK3BP1-PMS2P11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AC004878-009 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AC004878-009 Gene

Genomic Locations for AC004878-009 Gene
chr7:77,013,583-77,013,678
(GRCh38/hg38)
Size:
96 bases
Orientation:
Plus strand

Genomic View for AC004878-009 Gene

Genes around AC004878-009 on UCSC Golden Path with GeneCards custom track
AC004878-009 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AC004878-009 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AC004878-009 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AC004878-009 Gene

Proteins for AC004878-009 Gene

Post-translational modifications for AC004878-009 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AC004878-009 Gene

Domains & Families for AC004878-009 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AC004878-009 Gene

Function for AC004878-009 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AC004878-009 Gene

Localization for AC004878-009 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AC004878-009 Gene

Pathways & Interactions for AC004878-009 Gene

PathCards logo

SuperPathways for AC004878-009 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AC004878-009 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AC004878-009 Gene

Drugs & Compounds for AC004878-009 Gene

No Compound Related Data Available

Transcripts for AC004878-009 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AC004878-009 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000029DE41_9606 scRNA 96 1

ENA: AC004878.3:36220..36315:ncRNA, AC004878.3:8195..8290:ncRNA, AC007000.2:18245..18340:ncRNA, AC114737.3:87408..87503:ncRNA,

AC004878-009 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AC004878-009 Gene

No ASD Table

Relevant External Links for AC004878-009 Gene

GeneLoc Exon Structure for
AC004878-009

No data available for mRNA/cDNA for AC004878-009 Gene

Expression for AC004878-009 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AC004878-009 Gene

Orthologs for AC004878-009 Gene

No data available for Orthologs and Evolution for AC004878-009 Gene

Paralogs for AC004878-009 Gene

No data available for Paralogs for AC004878-009 Gene

Variants for AC004878-009 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AC004878-009 Gene

Disorders for AC004878-009 Gene

No disorders were found for AC004878-009 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AC004878-009 Gene

Publications for AC004878-009 Gene

No publications were found for AC004878-009 Gene.

No data available for Mastermind for AC004878-009 Gene

Products for AC004878-009 Gene

Sources for AC004878-009 Gene