Aliases for AC003080 Gene

Subcategory (RNA class) for AC003080 Gene

rRNA

Number of RNA Genes sources:

1 / 14

Aliases for AC003080 Gene

No Aliases found

No data available for External Ids for AC003080 Gene

Summaries for AC003080 Gene

GeneCards Summary for AC003080 Gene

AC003080 is an RNA Gene, and is affiliated with the rRNA class.

Rfam classification for AC003080 Gene

Additional gene information for AC003080 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for AC003080 Gene

Genomics for AC003080 Gene

GeneHancer (GH) Regulatory Elements for AC003080 Gene

Promoters and enhancers for AC003080 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J111952 Enhancer 1.1 FANTOM5 Ensembl ENCODE 500.7 -0.9 -936 3.8 CTCF NR2F2 GABPA RAD21 GTF2A2 NFE2 JUND EHMT2 ELF1 ZNF654 AC003080 RNA5SP237 piR-57394-207 DOCK4
GH07J111953 Enhancer 0.3 Ensembl 500.7 +1.4 1364 0.4 ZIC2 AC003080 RNA5SP237 RF00017-6565 DOCK4
GH07J111930 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +22.2 22164 2.4 FOXK2 POLR2G JUND TCF7 TGIF2 SKI TEAD1 TBX3 ZKSCAN8 FOXA2 RF00017-6565 AC003080 RNA5SP237 DOCK4
GH07J111958 Enhancer 0.7 Ensembl 0.4 -5.2 -5236 2 ZIC2 MXI1 OSR2 WT1 FOXA2 ZFHX2 FOXA1 IKZF3 SCRT1 ZNF843 piR-57394-207 AC003080 RNA5SP237 DOCK4
GH07J111918 Enhancer 0.9 Ensembl dbSUPER 0.3 +33.9 33892 1.1 TCF7 SKI TEAD1 ZKSCAN8 FOXA2 SAP130 EZH2 CREM FOXP1 SMAD4 RF00017-6565 AC003080 RNA5SP237 DOCK4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AC003080 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AC003080 Gene

Genomic Locations for AC003080 Gene
chr7:111,953,681-111,953,765
(GRCh38/hg38)
Size:
85 bases
Orientation:
Minus strand

Genomic View for AC003080 Gene

Genes around AC003080 on UCSC Golden Path with GeneCards custom track

AC003080 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AC003080 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AC003080 Gene

Proteins for AC003080 Gene

Post-translational modifications for AC003080 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AC003080 Gene

Domains & Families for AC003080 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AC003080 Gene

Function for AC003080 Gene

miRNA for AC003080 Gene

miRTarBase miRNAs that target AC003080

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for AC003080 Gene

Localization for AC003080 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AC003080 Gene

Pathways & Interactions for AC003080 Gene

PathCards logo

SuperPathways for AC003080 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for AC003080 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AC003080 Gene

Drugs & Compounds for AC003080 Gene

No Compound Related Data Available

Transcripts for AC003080 Gene

mRNA/cDNA for AC003080 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for AC003080 Gene

No ASD Table

Relevant External Links for AC003080 Gene

GeneLoc Exon Structure for
AC003080

Expression for AC003080 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AC003080 Gene

Orthologs for AC003080 Gene

No data available for Orthologs and Evolution for AC003080 Gene

Paralogs for AC003080 Gene

No data available for Paralogs for AC003080 Gene

Variants for AC003080 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AC003080 Gene

Disorders for AC003080 Gene

No disorders were found for AC003080 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AC003080 Gene

Publications for AC003080 Gene

No publications were found for AC003080 Gene.

No data available for Mastermind for AC003080 Gene

Products for AC003080 Gene

Sources for AC003080 Gene