Aliases for AC002454 Gene

Subcategory (RNA class) for AC002454 Gene

misc_RNA

Number of RNA Genes sources:

1 / 17

Aliases for AC002454 Gene

No Aliases found

No data available for External Ids for AC002454 Gene

Summaries for AC002454 Gene

GeneCards Summary for AC002454 Gene

AC002454 is an RNA Gene, and is affiliated with the misc_RNA class.

Rfam classification for AC002454 Gene

  • Metazoan signal recognition particle RNA

Additional gene information for AC002454 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for AC002454 Gene

Genomics for AC002454 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AC002454 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J092902 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.2 +66.9 66860 2.9 RNF2 SP1 LEF1 BACH1 JUND RELA PKNOX1 ZNF24 IKZF2 TRIM22 FAM133B PEX1 SAMD9 piR-48369-193 AC002454 CDK6 CDK6-AS1
GH07J092926 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.3 +44.6 44595 1.8 CEBPG GATAD2A ZIC2 CEBPA SCRT2 SOX13 EGR1 FOXA2 ZFHX2 ZSCAN16 AC002454 piR-48369-193 CDK6 CDK6-AS1 SAMD9
GH07J092916 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.2 +54.3 54295 2 TEAD4 FOXA1 RFX1 POLR2A ZXDB CTBP1 EZH2 CEBPB RCOR1 ZBTB17 piR-48369-193 AC002454 CDK6 CDK6-AS1 SAMD9
GH07J092933 Enhancer 0.8 Ensembl ENCODE 0.3 +37.1 37095 1.2 CREB1 TARDBP ZHX2 FOXA1 ATF7 BMI1 CTBP1 PKNOX1 ZNF217 GATAD2B AC002454 piR-48369-193 CDK6 CDK6-AS1 SAMD9
GH07J092962 Enhancer 0.4 FANTOM5 0.4 +8.4 8365 0.3 ZNF316 MAFK FAM133B AC002454 piR-48369-193 CDK6 SAMD9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AC002454 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AC002454 Gene

Genomic Locations for AC002454 Gene
chr7:92,971,003-92,971,296
(GRCh38/hg38)
Size:
294 bases
Orientation:
Minus strand

Genomic View for AC002454 Gene

Genes around AC002454 on UCSC Golden Path with GeneCards custom track
AC002454 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AC002454 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AC002454 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AC002454 Gene

Proteins for AC002454 Gene

Post-translational modifications for AC002454 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AC002454 Gene

Domains & Families for AC002454 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AC002454 Gene

Function for AC002454 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AC002454 Gene

Localization for AC002454 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AC002454 Gene

Pathways & Interactions for AC002454 Gene

PathCards logo

SuperPathways for AC002454 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AC002454 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AC002454 Gene

Drugs & Compounds for AC002454 Gene

No Compound Related Data Available

Transcripts for AC002454 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AC002454 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000017B33E_9606 misc_RNA 294 1

ENA: AC002454.1:132194..132487:misc_RNA,

AC002454 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AC002454 Gene

No ASD Table

Relevant External Links for AC002454 Gene

GeneLoc Exon Structure for
AC002454

No data available for mRNA/cDNA for AC002454 Gene

Expression for AC002454 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AC002454 Gene

Orthologs for AC002454 Gene

No data available for Orthologs and Evolution for AC002454 Gene

Paralogs for AC002454 Gene

No data available for Paralogs for AC002454 Gene

Variants for AC002454 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AC002454 Gene

Disorders for AC002454 Gene

No disorders were found for AC002454 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AC002454 Gene

Publications for AC002454 Gene

No publications were found for AC002454 Gene.

No data available for Mastermind for AC002454 Gene

Products for AC002454 Gene

Sources for AC002454 Gene