Aliases for ABT1P1 Gene

Aliases for ABT1P1 Gene

  • Activator Of Basal Transcription 1 Pseudogene 1 2 3 5
  • ABT1P1 5

External Ids for ABT1P1 Gene

Previous GeneCards Identifiers for ABT1P1 Gene

  • GC04M099945

Summaries for ABT1P1 Gene

GeneCards Summary for ABT1P1 Gene

ABT1P1 (Activator Of Basal Transcription 1 Pseudogene 1) is a Pseudogene.

Additional gene information for ABT1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ABT1P1 Gene

Genomics for ABT1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ABT1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J099022 Promoter/Enhancer 1.1 Ensembl ENCODE 600.7 -1.3 -1301 3.3 IKZF1 MTA2 MTA1 NR2C1 DPF2 HDAC1 SOX6 GATAD2B TCF12 EP300 ABT1P1 lnc-ADH5-2 ENSG00000272777 ENSG00000246090 EIF4E ADH5 METAP1
GH04J099027 Enhancer 0.6 ENCODE 0.7 -4.4 -4430 0.2 SOX13 TCF7 HMBOX1 FOXP1 HOMEZ RARA ETV4 TEAD3 NR2F6 SOX5 ABT1P1 METAP1 ENSG00000272777 ADH5
GH04J099056 Enhancer 1 Ensembl ENCODE 0.3 -33.1 -33146 1.4 GATAD2A CTCF PRDM10 JUND RXRB REST RAD21 IRF2 ZNF24 TRIM22 ENSG00000272777 ABT1P1 ADH5 METAP1
GH04J099057 Enhancer 0.8 Ensembl ENCODE 0.3 -37.4 -37352 5.2 PRDM1 ZNF600 SP1 ZNF639 JUND ESR1 MAX FOSL2 ZNF335 TCF7L2 ENSG00000272777 ENSG00000246090 ADH5 ABT1P1 METAP1
GH04J099042 Enhancer 0.4 Ensembl ENCODE 0.4 -20.3 -20346 2.2 CEBPB ENSG00000272777 RNU7-149P ENSG00000246090 ADH1A ABT1P1 METAP1 ADH5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ABT1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ABT1P1 Gene

Genomic Locations for ABT1P1 Gene
chr4:99,022,122-99,023,155
(GRCh38/hg38)
Size:
1,034 bases
Orientation:
Minus strand
chr4:99,943,462-99,944,282
(GRCh37/hg19)
Size:
821 bases
Orientation:
Minus strand

Genomic View for ABT1P1 Gene

Genes around ABT1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ABT1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABT1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ABT1P1 Gene

Proteins for ABT1P1 Gene

Post-translational modifications for ABT1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ABT1P1 Gene

Domains & Families for ABT1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ABT1P1 Gene

Function for ABT1P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ABT1P1 Gene

Localization for ABT1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ABT1P1 Gene

Pathways & Interactions for ABT1P1 Gene

PathCards logo

SuperPathways for ABT1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ABT1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ABT1P1 Gene

Drugs & Compounds for ABT1P1 Gene

No Compound Related Data Available

Transcripts for ABT1P1 Gene

mRNA/cDNA for ABT1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ABT1P1 Gene

No ASD Table

Relevant External Links for ABT1P1 Gene

GeneLoc Exon Structure for
ABT1P1

Expression for ABT1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ABT1P1 Gene

mRNA differential expression in normal tissues according to GTEx for ABT1P1 Gene

This gene is overexpressed in Testis (x38.6).
genes like me logo Genes that share expression patterns with ABT1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ABT1P1 Gene

Orthologs for ABT1P1 Gene

Evolution for ABT1P1 Gene

ENSEMBL:
Gene Tree for ABT1P1 (if available)
TreeFam:
Gene Tree for ABT1P1 (if available)

No data available for Orthologs for ABT1P1 Gene

Paralogs for ABT1P1 Gene

No data available for Paralogs for ABT1P1 Gene

Variants for ABT1P1 Gene

Additional Variant Information for ABT1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ABT1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ABT1P1 Gene

Disorders for ABT1P1 Gene

No disorders were found for ABT1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ABT1P1 Gene

Publications for ABT1P1 Gene

No publications were found for ABT1P1 Gene.

No data available for Mastermind for ABT1P1 Gene

Products for ABT1P1 Gene

Sources for ABT1P1 Gene