Aliases for ABHD15-AS1 Gene

Subcategory (RNA class) for ABHD15-AS1 Gene

lncRNA

Quality Score for this RNA gene is

11

Aliases for ABHD15-AS1 Gene

  • ABHD15 Antisense RNA 1 2 3 5
  • Linc-TP53I13 3
  • Lnc-TP53I13 3
  • ABHD15-AS1 2

External Ids for ABHD15-AS1 Gene

Previous GeneCards Identifiers for ABHD15-AS1 Gene

  • GC00U934984

Summaries for ABHD15-AS1 Gene

GeneCards Summary for ABHD15-AS1 Gene

ABHD15-AS1 (ABHD15 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ABHD15-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ABHD15-AS1 Gene

Genomics for ABHD15-AS1 Gene

GeneHancer (GH) Regulatory Elements for ABHD15-AS1 Gene

Promoters and enhancers for ABHD15-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J029560 Promoter/Enhancer 0.9 Ensembl ENCODE 750.6 +0.0 38 0.7 MLLT1 IKZF1 IKZF2 EED HDGF ZSCAN29 POLR2A NBN EBF1 TARDBP ABHD15-AS1 lnc-TAOK1-3 ABHD15 TP53I13
GH17J029561 Promoter/Enhancer 0.8 Ensembl ENCODE 750.6 +1.6 1560 1 MAFK SP1 ZNF316 RUNX3 ABHD15-AS1 TP53I13 ABHD15
GH17J029565 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +7.1 7099 5.1 CTCF RBPJ POLR2A MYC L3MBTL2 ZNF121 NKRF ZFX SP1 MLLT1 TP53I13 ABHD15 ENSG00000264290 lnc-ABHD15-2 lnc-TAOK1-8 CORO6 ANKRD13B ABHD15-AS1
GH17J029586 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 +30.1 30055 8.4 SIN3A ZBTB40 CTCF SIX5 ZBTB6 SMARCE1 POLR2A USF2 CREB1 HCFC1 ANKRD13B GIT1 ENSG00000264647 SUPT6H NUFIP2 ENSG00000264577 GOSR1 PHF12 TP53I13 ENSG00000265908
GH17J029557 Enhancer 1 Ensembl ENCODE 0.6 -3.1 -3146 2 SMARCE1 DACH1 ZNF121 TEAD4 SP1 BACH1 CBFA2T2 MLLT1 SMARCA4 TRIM24 lnc-TAOK1-3 GOSR1 ENSG00000264577 ENSG00000265205 TP53I13 ABHD15-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ABHD15-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ABHD15-AS1 Gene

Genomic Locations for ABHD15-AS1 Gene
chr17:29,560,547-29,707,090
(GRCh38/hg38)
Size:
146,544 bases
Orientation:
Plus strand

Genomic View for ABHD15-AS1 Gene

Genes around ABHD15-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ABHD15-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABHD15-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ABHD15-AS1 Gene

Proteins for ABHD15-AS1 Gene

Post-translational modifications for ABHD15-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ABHD15-AS1 Gene

Domains & Families for ABHD15-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ABHD15-AS1 Gene

Function for ABHD15-AS1 Gene

Phenotypes From GWAS Catalog for ABHD15-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ABHD15-AS1 Gene

Localization for ABHD15-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ABHD15-AS1 Gene

Pathways & Interactions for ABHD15-AS1 Gene

PathCards logo

SuperPathways for ABHD15-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ABHD15-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ABHD15-AS1 Gene

Drugs & Compounds for ABHD15-AS1 Gene

No Compound Related Data Available

Transcripts for ABHD15-AS1 Gene

mRNA/cDNA for ABHD15-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ABHD15-AS1 Gene

No ASD Table

Relevant External Links for ABHD15-AS1 Gene

GeneLoc Exon Structure for
ABHD15-AS1
ECgene alternative splicing isoforms for
ABHD15-AS1

Expression for ABHD15-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ABHD15-AS1 Gene

genes like me logo Genes that share expression patterns with ABHD15-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ABHD15-AS1 Gene

Orthologs for ABHD15-AS1 Gene

Evolution for ABHD15-AS1 Gene

ENSEMBL:
Gene Tree for ABHD15-AS1 (if available)
TreeFam:
Gene Tree for ABHD15-AS1 (if available)

No data available for Orthologs for ABHD15-AS1 Gene

Paralogs for ABHD15-AS1 Gene

No data available for Paralogs for ABHD15-AS1 Gene

Variants for ABHD15-AS1 Gene

Additional Variant Information for ABHD15-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ABHD15-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ABHD15-AS1 Gene

Disorders for ABHD15-AS1 Gene

No disorders were found for ABHD15-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ABHD15-AS1 Gene

Publications for ABHD15-AS1 Gene

  1. Tissue-specific RNA-Seq in human evoked inflammation identifies blood and adipose LincRNA signatures of cardiometabolic diseases. (PMID: 24504737) Liu Y … Reilly MP (Arteriosclerosis, thrombosis, and vascular biology 2014) 2 3 56
  2. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3 56
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 56

Products for ABHD15-AS1 Gene

Sources for ABHD15-AS1 Gene