Aliases for ABHD15 Gene

Aliases for ABHD15 Gene

  • Abhydrolase Domain Containing 15 2 3 5
  • Alpha/Beta Hydrolase Domain-Containing Protein 15 3 4
  • Abhydrolase Domain-Containing Protein 15 3 4
  • Protein ABHD15 3 4
  • EC 3.1.1.- 4

External Ids for ABHD15 Gene

Previous GeneCards Identifiers for ABHD15 Gene

  • GC17M024912
  • GC17M027887
  • GC17M024097

Summaries for ABHD15 Gene

GeneCards Summary for ABHD15 Gene

ABHD15 (Abhydrolase Domain Containing 15) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include hydrolase activity. An important paralog of this gene is ABHD1.

Additional gene information for ABHD15 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ABHD15 Gene

Genomics for ABHD15 Gene

GeneHancer (GH) Regulatory Elements for ABHD15 Gene

Promoters and enhancers for ABHD15 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J029565 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 755.9 -0.6 -609 5.1 CTCF RBPJ POLR2A MYC L3MBTL2 ZNF121 NKRF ZFX SP1 MLLT1 TP53I13 ABHD15 ENSG00000264290 lnc-ABHD15-2 lnc-TAOK1-8 CORO6 ANKRD13B ABHD15-AS1
GH17J029586 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11 -23.6 -23565 8.4 SIN3A ZBTB40 CTCF SIX5 ZBTB6 SMARCE1 POLR2A USF2 CREB1 HCFC1 ANKRD13B GIT1 ENSG00000264647 SUPT6H NUFIP2 ENSG00000264577 GOSR1 PHF12 TP53I13 ENSG00000265908
GH17J029175 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.7 +388.4 388420 5.7 SIN3A ZNF24 ZBTB40 CTCF SREBF1 ZBTB6 MLX RBPJ SMARCE1 POLR2A MYO18A ENSG00000264577 ENSG00000265205 ENSG00000264290 ENSG00000265908 NUFIP2 ENSG00000264044 RPL23A SDF2 LOC101927018
GH17J028737 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.7 +822.8 822817 13.9 ZNF785 SIN3A ZNF24 SP1 ZBTB40 CTCF SREBF1 FOXA1 ZBTB6 MLX TRAF4 ENSG00000265073 piR-43105-269 ENSG00000264577 NUFIP2 ENSG00000265205 SUPT6H ENSG00000264290 RPL23A ENSG00000265908
GH17J028709 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 10.7 +855.6 855571 3.7 ZNF785 SP1 ZBTB6 MLX SMARCE1 POLR2A ZNF362 RUNX1 ZNF133 NFYC PROCA1 RF00017-2326 lnc-RAB34-1 ENSG00000264577 NUFIP2 ENSG00000265908 ENSG00000265205 ENSG00000264290 SUPT6H PHF12
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ABHD15 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the ABHD15 gene promoter:
  • c-Ets-1
  • MRF-2
  • Nkx6-1
  • NRSF form 1
  • NRSF form 2
  • p53
  • Roaz

Genomic Locations for ABHD15 Gene

Genomic Locations for ABHD15 Gene
chr17:29,560,547-29,567,037
(GRCh38/hg38)
Size:
6,491 bases
Orientation:
Minus strand
chr17:27,887,565-27,894,155
(GRCh37/hg19)
Size:
6,591 bases
Orientation:
Minus strand

Genomic View for ABHD15 Gene

Genes around ABHD15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ABHD15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABHD15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ABHD15 Gene

Proteins for ABHD15 Gene

  • Protein details for ABHD15 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UXT9-ABH15_HUMAN
    Recommended name:
    Protein ABHD15
    Protein Accession:
    Q6UXT9
    Secondary Accessions:
    • Q96EC5

    Protein attributes for ABHD15 Gene

    Size:
    468 amino acids
    Molecular mass:
    51771 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ABHD15 Gene

Post-translational modifications for ABHD15 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ABHD15 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ABHD15 Gene

Domains & Families for ABHD15 Gene

Gene Families for ABHD15 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted secreted proteins

Protein Domains for ABHD15 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ABHD15 Gene

GenScript: Design optimal peptide antigens:
  • Abhydrolase domain-containing protein 15 (ABH15_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q6UXT9

UniProtKB/Swiss-Prot:

ABH15_HUMAN :
  • Belongs to the AB hydrolase superfamily. AB hydrolase 4 family.
Family:
  • Belongs to the AB hydrolase superfamily. AB hydrolase 4 family.
genes like me logo Genes that share domains with ABHD15: view

Function for ABHD15 Gene

Enzyme Numbers (IUBMB) for ABHD15 Gene

Phenotypes From GWAS Catalog for ABHD15 Gene

Gene Ontology (GO) - Molecular Function for ABHD15 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016787 hydrolase activity IEA --
genes like me logo Genes that share ontologies with ABHD15: view
genes like me logo Genes that share phenotypes with ABHD15: view

Animal Models for ABHD15 Gene

MGI Knock Outs for ABHD15:
  • Abhd15 Abhd15<tm1b(KOMP)Wtsi>

Animal Model Products

CRISPR Products

miRNA for ABHD15 Gene

miRTarBase miRNAs that target ABHD15

Clone Products

No data available for Molecular function , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for ABHD15 Gene

Localization for ABHD15 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ABHD15 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ABHD15 gene
Compartment Confidence
extracellular 3
plasma membrane 1
nucleus 1
cytosol 1
golgi apparatus 0

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (2)
  • Nucleoplasm (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ABHD15 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
GO:0016020 membrane HDA 19946888
genes like me logo Genes that share ontologies with ABHD15: view

Pathways & Interactions for ABHD15 Gene

PathCards logo

SuperPathways for ABHD15 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ABHD15 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0044255 cellular lipid metabolic process IBA 21873635
genes like me logo Genes that share ontologies with ABHD15: view

No data available for Pathways by source and SIGNOR curated interactions for ABHD15 Gene

Drugs & Compounds for ABHD15 Gene

No Compound Related Data Available

Transcripts for ABHD15 Gene

mRNA/cDNA for ABHD15 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(62) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ABHD15 Gene

No ASD Table

Relevant External Links for ABHD15 Gene

GeneLoc Exon Structure for
ABHD15
ECgene alternative splicing isoforms for
ABHD15

Expression for ABHD15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ABHD15 Gene

Protein differential expression in normal tissues from HIPED for ABHD15 Gene

This gene is overexpressed in Kidney (23.4), Spleen (23.3), and Heart (6.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for ABHD15 Gene



NURSA nuclear receptor signaling pathways regulating expression of ABHD15 Gene:

ABHD15

SOURCE GeneReport for Unigene cluster for ABHD15 Gene:

Hs.106510
genes like me logo Genes that share expression patterns with ABHD15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ABHD15 Gene

Orthologs for ABHD15 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ABHD15 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ABHD15 33 32
  • 99 (n)
OneToOne
cow
(Bos Taurus)
Mammalia ABHD15 33 32
  • 88.68 (n)
OneToOne
dog
(Canis familiaris)
Mammalia ABHD15 33 32
  • 88.2 (n)
OneToOne
mouse
(Mus musculus)
Mammalia Abhd15 17 33 32
  • 85.01 (n)
rat
(Rattus norvegicus)
Mammalia Abhd15 32
  • 84.09 (n)
oppossum
(Monodelphis domestica)
Mammalia ABHD15 33
  • 76 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia abhd15 32
  • 57.96 (n)
African clawed frog
(Xenopus laevis)
Amphibia Xl.8045 32
zebrafish
(Danio rerio)
Actinopterygii ABHD15 33
  • 46 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes EHT1 33
  • 16 (a)
ManyToMany
EEB1 33
  • 14 (a)
ManyToMany
-- 33
  • 14 (a)
ManyToMany
Species where no ortholog for ABHD15 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ABHD15 Gene

ENSEMBL:
Gene Tree for ABHD15 (if available)
TreeFam:
Gene Tree for ABHD15 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for ABHD15: view image

Paralogs for ABHD15 Gene

Paralogs for ABHD15 Gene

Pseudogenes.org Pseudogenes for ABHD15 Gene

genes like me logo Genes that share paralogs with ABHD15: view

Variants for ABHD15 Gene

Sequence variations from dbSNP and Humsavar for ABHD15 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000885200 -- 29,565,266(-) ATA/A intron_variant
rs1001188507 -- 29,560,980(-) G/C 3_prime_UTR_variant
rs1001480834 -- 29,563,415(-) A/G intron_variant
rs1001595270 -- 29,565,508(-) T/C/G intron_variant
rs1001938803 -- 29,564,547(-) C/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ABHD15 Gene

Variant ID Type Subtype PubMed ID
esv22811 CNV loss 19812545
nsv521557 CNV loss 19592680
nsv833409 CNV gain 17160897

Variation tolerance for ABHD15 Gene

Residual Variation Intolerance Score: 75.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.45; 54.83% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ABHD15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ABHD15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ABHD15 Gene

Disorders for ABHD15 Gene

Additional Disease Information for ABHD15

No disorders were found for ABHD15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ABHD15 Gene

Publications for ABHD15 Gene

  1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark HF … Gray A (Genome research 2003) 2 3 4 56
  2. VIRMA mediates preferential m6A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. (PMID: 29507755) Yue Y … Liu J (Cell discovery 2018) 3 56
  3. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 56
  4. Toward a comprehensive characterization of a human cancer cell phosphoproteome. (PMID: 23186163) Zhou H … Mohammed S (Journal of proteome research 2013) 4 56
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3 56

Products for ABHD15 Gene

Sources for ABHD15 Gene