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Aliases for ABHD11-AS1 Gene

Subcategory (RNA class) for ABHD11-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ABHD11-AS1 Gene

  • ABHD11 Antisense RNA 1 (Tail To Tail) 2 3 5
  • Williams Beuren Syndrome Chromosome Region 26 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 35 2 3
  • Williams Beuren Syndrome Chromosome Region 26 2
  • ABHD11 Antisense RNA 1 (Non-Protein Coding) 3
  • Non-Protein Coding RNA 35 2
  • NCRNA00035 3
  • LINC00035 3
  • WBSCR26 3

External Ids for ABHD11-AS1 Gene

Previous HGNC Symbols for ABHD11-AS1 Gene

  • WBSCR26
  • LINC00035

Previous GeneCards Identifiers for ABHD11-AS1 Gene

  • GC07P073151

Summaries for ABHD11-AS1 Gene

GeneCards Summary for ABHD11-AS1 Gene

ABHD11-AS1 (ABHD11 Antisense RNA 1 (Tail To Tail)) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with ABHD11-AS1 include Bladder Cancer and Gastric Cancer.

Additional gene information for ABHD11-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ABHD11-AS1 Gene

Genomics for ABHD11-AS1 Gene

GeneHancer (GH) Regulatory Elements for ABHD11-AS1 Gene

Promoters and enhancers for ABHD11-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J073734 Enhancer 1.2 Ensembl ENCODE 650.7 +0.2 216 1.9 HDGF PKNOX1 ARNT ARID4B SIN3A ZNF2 POLR2B E2F8 ZNF143 DEK ABHD11-AS1 ABHD11 METTL27 PIR39049
GH07J073736 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 27.7 +5.7 5687 7.8 CLOCK ZFP64 DMAP1 YY1 SLC30A9 E2F8 ZNF143 SP3 ZNF610 GLIS1 ABHD11 GC07P073741 GC07P073742 METTL27 STAG3L3 POM121B ABHD11-AS1 POM121 NSUN5P2 MIR590
GH07J073766 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 26.5 +34.3 34292 4.9 PKNOX1 CLOCK SIN3A ZBTB7B ZNF121 GLIS2 KLF7 FOS SP3 RXRA CLDN3 GC07M073769 GC07M073770 METTL27 ABHD11-AS1 GC07P073744
GH07J073773 Enhancer 0.9 ENCODE dbSUPER 38.2 +38.9 38858 1.7 HDAC1 FOXA2 RXRA NFIB JUN MAX REST RAD21 YY1 SP1 METTL27 ABHD11-AS1 CLDN3 CLDN4
GH07J073745 Enhancer 0.8 ENCODE dbSUPER 27.6 +11.3 11337 1 SMARCE1 MEIS2 ZNF687 PKNOX1 FOXA2 DPF2 ZNF592 FOXA1 GATA3 JUND ABHD11-AS1 METTL27 ABHD11 GC07P073744 GC07M073769 GC07M073770
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ABHD11-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ABHD11-AS1 Gene

Genomic Locations for ABHD11-AS1 Gene
chr7:73,735,038-73,736,158
(GRCh38/hg38)
Size:
1,121 bases
Orientation:
Plus strand
chr7:73,149,368-73,150,384
(GRCh37/hg19)
Size:
1,017 bases
Orientation:
Plus strand

Genomic View for ABHD11-AS1 Gene

Genes around ABHD11-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ABHD11-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABHD11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ABHD11-AS1 Gene

Proteins for ABHD11-AS1 Gene

Post-translational modifications for ABHD11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ABHD11-AS1 Gene

Domains & Families for ABHD11-AS1 Gene

Gene Families for ABHD11-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ABHD11-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ABHD11-AS1 Gene

Function for ABHD11-AS1 Gene

Phenotypes From GWAS Catalog for ABHD11-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ABHD11-AS1 Gene

Localization for ABHD11-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ABHD11-AS1 Gene

Pathways & Interactions for ABHD11-AS1 Gene

SuperPathways for ABHD11-AS1 Gene

No Data Available

Interacting Proteins for ABHD11-AS1 Gene

Gene Ontology (GO) - Biological Process for ABHD11-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ABHD11-AS1 Gene

Drugs & Compounds for ABHD11-AS1 Gene

No Compound Related Data Available

Transcripts for ABHD11-AS1 Gene

mRNA/cDNA for ABHD11-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ABHD11-AS1 Gene

No ASD Table

Relevant External Links for ABHD11-AS1 Gene

GeneLoc Exon Structure for
ABHD11-AS1
ECgene alternative splicing isoforms for
ABHD11-AS1

Expression for ABHD11-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ABHD11-AS1 Gene

genes like me logo Genes that share expression patterns with ABHD11-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ABHD11-AS1 Gene

Orthologs for ABHD11-AS1 Gene

Evolution for ABHD11-AS1 Gene

ENSEMBL:
Gene Tree for ABHD11-AS1 (if available)
TreeFam:
Gene Tree for ABHD11-AS1 (if available)

No data available for Orthologs for ABHD11-AS1 Gene

Paralogs for ABHD11-AS1 Gene

No data available for Paralogs for ABHD11-AS1 Gene

Variants for ABHD11-AS1 Gene

Sequence variations from dbSNP and Humsavar for ABHD11-AS1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000904320 -- 73,733,343(+) C/A upstream_transcript_variant
rs1001117218 -- 73,733,664(+) C/G/T upstream_transcript_variant
rs1001188510 -- 73,734,037(+) G/A/C upstream_transcript_variant
rs1001251575 -- 73,733,106(+) T/C upstream_transcript_variant
rs1001640022 -- 73,734,194(+) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ABHD11-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2761337 CNV loss 21179565
nsv469841 CNV loss 16826518
nsv831028 CNV loss 17160897

Additional Variant Information for ABHD11-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ABHD11-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ABHD11-AS1 Gene

Disorders for ABHD11-AS1 Gene

MalaCards: The human disease database

(3) MalaCards diseases for ABHD11-AS1 Gene - From: LncRNADisease, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
bladder cancer
  • bladder cancer, somatic
gastric cancer
  • gastric cancer, somatic
williams-beuren syndrome
  • wbs
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for ABHD11-AS1

genes like me logo Genes that share disorders with ABHD11-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ABHD11-AS1 Gene

Publications for ABHD11-AS1 Gene

  1. Increased lncRNA ABHD11-AS1 represses the malignant phenotypes of bladder cancer. (PMID: 28157695) Chen M … Cai Z (Oncotarget 2017) 2 3 58
  2. Striatal long noncoding RNA Abhd11os is neuroprotective against an N-terminal fragment of mutant huntingtin in vivo. (PMID: 25619660) Francelle L … Brouillet E (Neurobiology of aging 2015) 2 3 58
  3. Increased expression of long noncoding RNA ABHD11-AS1 in gastric cancer and its clinical significance. (PMID: 24984296) Lin X … Guo J (Medical oncology (Northwood, London, England) 2014) 2 3 58
  4. Using gastric juice lncRNA-ABHD11-AS1 as a novel type of biomarker in the screening of gastric cancer. (PMID: 26280398) Yang Y … Guo J (Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine 2016) 3 58
  5. Williams-Beuren syndrome TRIM50 encodes an E3 ubiquitin ligase. (PMID: 18398435) Micale L … Reymond A (European journal of human genetics : EJHG 2008) 3 58

Products for ABHD11-AS1 Gene

Sources for ABHD11-AS1 Gene

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