Aliases for ABHD11-AS1 Gene

Subcategory (RNA class) for ABHD11-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ABHD11-AS1 Gene

  • ABHD11 Antisense RNA 1 (Tail To Tail) 2 3 5
  • Williams Beuren Syndrome Chromosome Region 26 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 35 2 3
  • NCRNA00035 2 3
  • ABHD11-AS1 2 5
  • Williams Beuren Syndrome Chromosome Region 26 2
  • ABHD11 Antisense RNA 1 (Non-Protein Coding) 3
  • Non-Protein Coding RNA 35 2
  • NONHSAG047941.2 91
  • HSALNG0058863 164
  • Lnc-BUD23-1 165
  • LINC00035 3
  • WBSCR26 3

External Ids for ABHD11-AS1 Gene

Previous HGNC Symbols for ABHD11-AS1 Gene

  • WBSCR26
  • LINC00035

Previous GeneCards Identifiers for ABHD11-AS1 Gene

  • GC07P073151

Summaries for ABHD11-AS1 Gene

GeneCards Summary for ABHD11-AS1 Gene

ABHD11-AS1 (ABHD11 Antisense RNA 1 (Tail To Tail)) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ABHD11-AS1 include Bladder Cancer and Gastric Cancer.

Additional gene information for ABHD11-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ABHD11-AS1 Gene

Genomics for ABHD11-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ABHD11-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ABHD11-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ABHD11-AS1 Gene

Genomic Locations for ABHD11-AS1 Gene
chr7:73,735,038-73,736,158
(GRCh38/hg38)
Size:
1,121 bases
Orientation:
Plus strand
chr7:73,149,368-73,150,384
(GRCh37/hg19)
Size:
1,017 bases
Orientation:
Plus strand

Genomic View for ABHD11-AS1 Gene

Genes around ABHD11-AS1 on UCSC Golden Path with GeneCards custom track
ABHD11-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ABHD11-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABHD11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ABHD11-AS1 Gene

Proteins for ABHD11-AS1 Gene

Post-translational modifications for ABHD11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ABHD11-AS1 Gene

Domains & Families for ABHD11-AS1 Gene

Gene Families for ABHD11-AS1 Gene

genes like me logo Genes that share domains with ABHD11-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ABHD11-AS1 Gene

Function for ABHD11-AS1 Gene

Phenotypes From GWAS Catalog for ABHD11-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ABHD11-AS1 Gene

Localization for ABHD11-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ABHD11-AS1 gene
Compartment Confidence
extracellular 1
cytoskeleton 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ABHD11-AS1 Gene

Pathways & Interactions for ABHD11-AS1 Gene

PathCards logo

SuperPathways for ABHD11-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ABHD11-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ABHD11-AS1 Gene

Drugs & Compounds for ABHD11-AS1 Gene

No Compound Related Data Available

Transcripts for ABHD11-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ABHD11-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075D729_9606 lncRNA 473 3

HGNC: 18289,

RefSeq: NR_026690,

LNCipedia: lnc-BUD23-1:2,

URS000023AD70_9606 lncRNA 558 2

LNCipedia: lnc-BUD23-1:1,

NONCODE: NONHSAT121419.2,

URS00009BF188_9606 lncRNA 616 1

NONCODE: NONHSAT212237.1,

URS00009C2A0D_9606 lncRNA 613 1

NONCODE: NONHSAT212236.1,

URS0000D5DFA4_9606 lncRNA 513 1

LNCipedia: lnc-BUD23-1:3,

ABHD11-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ABHD11-AS1 Gene

1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ABHD11-AS1 Gene

No ASD Table

Relevant External Links for ABHD11-AS1 Gene

GeneLoc Exon Structure for
ABHD11-AS1

Expression for ABHD11-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ABHD11-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ABHD11-AS1

genes like me logo Genes that share expression patterns with ABHD11-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ABHD11-AS1 Gene

Orthologs for ABHD11-AS1 Gene

Evolution for ABHD11-AS1 Gene

ENSEMBL:
Gene Tree for ABHD11-AS1 (if available)
TreeFam:
Gene Tree for ABHD11-AS1 (if available)

No data available for Orthologs for ABHD11-AS1 Gene

Paralogs for ABHD11-AS1 Gene

No data available for Paralogs for ABHD11-AS1 Gene

Variants for ABHD11-AS1 Gene

Additional dbSNP identifiers (rs#s) for ABHD11-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for ABHD11-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2761337 CNV loss 21179565
nsv469841 CNV loss 16826518
nsv831028 CNV loss 17160897

Additional Variant Information for ABHD11-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ABHD11-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for ABHD11-AS1 Gene

Disorders for ABHD11-AS1 Gene

MalaCards: The human disease database

(3) MalaCards diseases for ABHD11-AS1 Gene - From: LncRNADisease, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
bladder cancer
  • bladder cancer, somatic
gastric cancer
  • gastric cancer, somatic
williams-beuren syndrome
  • wbs
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for ABHD11-AS1

genes like me logo Genes that share disorders with ABHD11-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ABHD11-AS1 Gene

Publications for ABHD11-AS1 Gene

  1. Increased lncRNA ABHD11-AS1 represses the malignant phenotypes of bladder cancer. (PMID: 28157695) Chen M … Cai Z (Oncotarget 2017) 2 3
  2. Striatal long noncoding RNA Abhd11os is neuroprotective against an N-terminal fragment of mutant huntingtin in vivo. (PMID: 25619660) Francelle L … Brouillet E (Neurobiology of aging 2015) 2 3
  3. Increased expression of long noncoding RNA ABHD11-AS1 in gastric cancer and its clinical significance. (PMID: 24984296) Lin X … Guo J (Medical oncology (Northwood, London, England) 2014) 2 3
  4. STAT3-induced upregulation of lncRNA ABHD11-AS1 promotes tumour progression in papillary thyroid carcinoma by regulating miR-1301-3p/STAT3 axis and PI3K/AKT signalling pathway. (PMID: 30657221) Wen J … Zhu Q (Cell proliferation 2019) 3
  5. Long noncoding RNA ABHD11-AS1 predicts the prognosis of pancreatic cancer patients and serves as a promoter by activating the PI3K-AKT pathway. (PMID: 30575903) Qiao X … Miao L (European review for medical and pharmacological sciences 2018) 3

Products for ABHD11-AS1 Gene

Sources for ABHD11-AS1 Gene