Aliases for ABCF3 Gene
Aliases for ABCF3 Gene
External Ids for ABCF3 Gene
- HGNC: 72
- Entrez Gene: 55324
- Ensembl: ENSG00000161204
- UniProtKB: Q9NUQ8
Previous GeneCards Identifiers for ABCF3 Gene
- GC03U990120
- GC03P185305
- GC03P185224
- GC03P185386
- GC03P183903
- GC03P181310
Summaries for ABCF3 Gene
-
This gene encodes a member of the ATP-binding cassette (ABC) transporter superfamily. ATP-binding cassette proteins transport various molecules across extra- and intracellular membranes. The protein encoded by this gene displays antiviral effect against flaviviruses. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2017]
GeneCards Summary for ABCF3 Gene
ABCF3 (ATP Binding Cassette Subfamily F Member 3) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include ATPase activity. An important paralog of this gene is ABCF1.
UniProtKB/Swiss-Prot for ABCF3 Gene
-
Displays an antiviral effect against flaviviruses such as west Nile virus (WNV) in the presence of OAS1B.
No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ABCF3 Gene
Genomics for ABCF3 Gene
GeneHancer (GH) Regulatory Elements for ABCF3 Gene
Promoters and enhancers for ABCF3 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around ABCF3 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for ABCF3 Gene
Genomic Locations for ABCF3 Gene
- chr3:184,186,023-184,194,452
- (GRCh38/hg38)
- Size:
- 8,430 bases
- Orientation:
- Plus strand
- chr3:183,903,811-183,911,800
- (GRCh37/hg19)
Genomic View for ABCF3 Gene
Genes around ABCF3 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 3q27.1 by Entrez Gene
- 3q27.1 by HGNC
- 3q27.1 by Ensembl
ABCF3 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ABCF3 Gene
Proteins for ABCF3 Gene
-
Protein details for ABCF3 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q9NUQ8-ABCF3_HUMAN
- Recommended name:
- ATP-binding cassette sub-family F member 3
- Protein Accession:
- Q9NUQ8
- A8K241
- Q86UA2
- Q8NAN1
- Q96GS8
- Q9H7A8
Protein attributes for ABCF3 Gene
- Size:
- 709 amino acids
- Molecular mass:
- 79745 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=BAB14989.1; Type=Erroneous initiation; Evidence={ECO:0000305};
Protein Expression for ABCF3 Gene
Post-translational modifications for ABCF3 Gene
Other Protein References for ABCF3 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Novus Biologicals Antibodies for ABCF3
- Invitrogen Antibodies for ABCF3
- GeneTex ABCF3 Antibody for ABCF3
Protein Products
-
OriGene Purified Proteins for ABCF3
- Search Origene for MassSpec and Protein Over-expression Lysates for ABCF3
- Origene Custom Protein Services for ABCF3
- Search GeneTex for Proteins for ABCF3
Assay Products
No data available for DME Specific Peptides for ABCF3 Gene
Domains & Families for ABCF3 Gene
Gene Families for ABCF3 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Protein Domains for ABCF3 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for ABCF3 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
Q9NUQ8UniProtKB/Swiss-Prot:
ABCF3_HUMAN :- Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily.
- Family:
-
- Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily.
Function for ABCF3 Gene
Molecular function for ABCF3 Gene
- UniProtKB/Swiss-Prot Function:
- Displays an antiviral effect against flaviviruses such as west Nile virus (WNV) in the presence of OAS1B.
- GENATLAS Biochemistry:
- ATP-binding cassette superfamily,subfamily F (GCN20),member 3
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005515 | protein binding | IPI | 21516116 |
| GO:0005524 | ATP binding | IEA | -- |
| GO:0016887 | ATPase activity | IEA | -- |
| GO:0045296 | cadherin binding | IDA | 25468996 |
Phenotypes for ABCF3 Gene
Animal Model Products
-
Taconic Biosciences Mouse Models for ABCF3
- Cyagen custom Knockout/knockin (KOKI) mouse models for ABCF3
-
CRISPR Products
-
OriGene CRISPR knockouts for ABCF3
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ABCF3
- genomics-online: gRNA clones - Search results for available ABCF3 gene related products
- Applied Biological Materials CRISPR for ABCF3
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for ABCF3
- GenScript: Design CRISPR guide RNA sequences for ABCF3
miRNA for ABCF3 Gene
- miRTarBase miRNAs that target ABCF3
-
- hsa-mir-4252 (MIRT091309)
- hsa-mir-155-3p (MIRT607597)
- hsa-mir-3941 (MIRT607598)
- hsa-mir-6845-3p (MIRT607599)
- hsa-mir-603 (MIRT607600)
- hsa-mir-362-3p (MIRT607601)
- hsa-mir-329-3p (MIRT607602)
- hsa-mir-8485 (MIRT607603)
- hsa-mir-6818-3p (MIRT608645)
- hsa-mir-548s (MIRT608646)
- hsa-mir-6864-3p (MIRT608647)
- hsa-mir-3672 (MIRT608648)
- hsa-mir-6888-3p (MIRT608649)
- hsa-mir-4684-5p (MIRT608650)
- hsa-mir-593-3p (MIRT608651)
- hsa-mir-6895-3p (MIRT608652)
- hsa-mir-3926 (MIRT608653)
- hsa-mir-769-5p (MIRT608654)
- hsa-mir-4786-5p (MIRT608655)
- hsa-mir-4738-3p (MIRT608656)
- hsa-mir-3120-5p (MIRT608657)
- hsa-mir-3190-5p (MIRT608658)
- hsa-mir-6849-3p (MIRT608659)
- hsa-mir-3664-5p (MIRT608660)
- hsa-mir-6510-3p (MIRT643618)
- hsa-mir-6873-3p (MIRT643619)
- hsa-mir-4522 (MIRT643620)
- hsa-mir-6817-3p (MIRT643621)
- hsa-mir-7110-3p (MIRT643622)
- hsa-mir-7703 (MIRT670080)
- hsa-mir-6720-5p (MIRT670081)
- hsa-mir-6512-3p (MIRT670082)
- hsa-mir-196a-3p (MIRT670083)
- hsa-mir-661 (MIRT670084)
- hsa-mir-6860 (MIRT670085)
- hsa-mir-612 (MIRT670086)
- hsa-mir-5189-5p (MIRT670087)
- hsa-mir-3187-5p (MIRT670088)
- hsa-mir-1285-3p (MIRT670089)
- hsa-mir-4793-3p (MIRT670090)
- hsa-mir-766-3p (MIRT670091)
- hsa-mir-1292-3p (MIRT670092)
- hsa-mir-939-3p (MIRT670093)
- hsa-mir-1273g-3p (MIRT670094)
- hsa-mir-3065-5p (MIRT670095)
- hsa-mir-508-5p (MIRT670096)
- hsa-mir-6827-3p (MIRT674177)
- hsa-mir-340-3p (MIRT674178)
- hsa-mir-1229-3p (MIRT761447)
- hsa-mir-1273e (MIRT761817)
- hsa-mir-1285-5p (MIRT762233)
- hsa-mir-3689d (MIRT767048)
- hsa-mir-377-5p (MIRT767348)
- hsa-mir-4537 (MIRT770115)
- hsa-mir-455-3p (MIRT770254)
- hsa-mir-4695-3p (MIRT771138)
- hsa-mir-6086 (MIRT775479)
- hsa-mir-6134 (MIRT775922)
- hsa-mir-6499-3p (MIRT776183)
- hsa-mir-6511a-3p (MIRT776751)
- hsa-mir-6511b-3p (MIRT776869)
- hsa-mir-6516-5p (MIRT777049)
- hsa-mir-665 (MIRT777520)
- hsa-mir-6784-3p (MIRT779084)
- hsa-mir-6840-3p (MIRT780101)
- hsa-mir-6851-5p (MIRT780386)
- hsa-mir-6862-3p (MIRT780594)
- hsa-mir-6880-5p (MIRT780811)
- hsa-mir-7847-3p (MIRT782129)
miRNA Products
Inhibitory RNA Products
- Origene sirna, shrna, and RNAi products in human, mouse, rat for ABCF3
- Browse OriGene Inhibitory RNA Products For ABCF3
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ABCF3
- genomics-online: shRNA clones - Search results for available ABCF3 gene related products
Clone Products
- Sino Biological Human cDNA Clone for ABCF3
- VectorBuilder custom plasmid, inducible vectors for ABCF3
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ABCF3
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ABCF3
- genomics-online: cdna clones - Search results for available ABCF3 gene related products
- orf clones - Search results for available ABCF3 gene related products
- Applied Biological Materials Clones for ABCF3
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for ABCF3
No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ABCF3 Gene
Localization for ABCF3 Gene
| Compartment | Confidence |
|---|---|
| cytosol | 4 |
| nucleus | 3 |
- Cytosol (2)
- Nucleoli (2)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0016020 | membrane | HDA | 19946888 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot for ABCF3 Gene
Pathways & Interactions for ABCF3 Gene
No Data Available
Interacting Proteins for ABCF3 Gene
Selected Interacting proteins:
Q9NUQ8-ABCF3_HUMAN
ENSP00000411471
for ABCF3 Gene via
IID
UniProtKB
MINT
STRING
GPS-Prot Interaction Network for ABCF3
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0051607 | defense response to virus | IEA | -- |
No data available for Pathways by source and SIGNOR curated interactions for ABCF3 Gene
Transcripts for ABCF3 Gene
mRNA/cDNA for ABCF3 Gene
- (296) Selected AceView cDNA sequences:
- (14) Additional mRNA sequences :
- (6) REFSEQ mRNAs :
- (18) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000292808 2453 bps (uc003fna.3)
- ENST00000421340 690 bps (uc062qsi.1)
- ENST00000429586 2624 bps (uc003fmz.3)
- ENST00000463685 661 bps (uc062qsk.1)
- ENST00000466416 554 bps (uc062qsp.1)
Unigene Clusters for ABCF3 Gene
CRISPR Products
-
OriGene CRISPR knockouts for ABCF3
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ABCF3
- genomics-online: gRNA clones - Search results for available ABCF3 gene related products
- Applied Biological Materials CRISPR for ABCF3
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for ABCF3
- GenScript: Design CRISPR guide RNA sequences for ABCF3
miRNA Products
Inhibitory RNA Products
- Origene sirna, shrna, and RNAi products in human, mouse, rat for ABCF3
- Browse OriGene Inhibitory RNA Products For ABCF3
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ABCF3
- genomics-online: shRNA clones - Search results for available ABCF3 gene related products
Clone Products
- Sino Biological Human cDNA Clone for ABCF3
- VectorBuilder custom plasmid, inducible vectors for ABCF3
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ABCF3
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ABCF3
- genomics-online: cdna clones - Search results for available ABCF3 gene related products
- orf clones - Search results for available ABCF3 gene related products
- Applied Biological Materials Clones for ABCF3
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | ^ | 2a | · | 2b | · | 2c | ^ | 3a | · | 3b | ^ | 4a | · | 4b | · | 4c | · | 4d | ^ | 5 | ^ | 6a | · | 6b | · | 6c | · | 6d | ^ | 7a | · | 7b | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| SP3: | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||||
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| SP6: | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||
| SP7: | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||||
| SP8: | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||||
| SP9: | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||||||
| SP10: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP11: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP12: | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||||||
| SP13: | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||||
| SP14: | - | |||||||||||||||||||||||||||||||||||||||||||||||||||
| SP15: | - | - | - | |||||||||||||||||||||||||||||||||||||||||||||||||
| SP16: | - | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||
| SP17: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP18: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP19: | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SP20: |
| ExUns: | 14a | · | 14b | · | 14c | · | 14d | ^ | 15a | · | 15b | · | 15c | ^ | 16 | ^ | 17 | ^ | 18 | ^ | 19 | ^ | 20a | · | 20b | ^ | 21 | ^ | 22a | · | 22b |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | - | |||||||||||||||||||||||||||||
| SP2: | - | - | |||||||||||||||||||||||||||||
| SP3: | - | - | |||||||||||||||||||||||||||||
| SP4: | - | - | |||||||||||||||||||||||||||||
| SP5: | |||||||||||||||||||||||||||||||
| SP6: | |||||||||||||||||||||||||||||||
| SP7: | |||||||||||||||||||||||||||||||
| SP8: | |||||||||||||||||||||||||||||||
| SP9: | |||||||||||||||||||||||||||||||
| SP10: | |||||||||||||||||||||||||||||||
| SP11: | |||||||||||||||||||||||||||||||
| SP12: | |||||||||||||||||||||||||||||||
| SP13: | |||||||||||||||||||||||||||||||
| SP14: | |||||||||||||||||||||||||||||||
| SP15: | |||||||||||||||||||||||||||||||
| SP16: | |||||||||||||||||||||||||||||||
| SP17: | |||||||||||||||||||||||||||||||
| SP18: | |||||||||||||||||||||||||||||||
| SP19: | |||||||||||||||||||||||||||||||
| SP20: | - |
Expression for ABCF3 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
- Head Mesenchyme (Muscoskeletal System)
- Gut Tube (Gastrointestinal Tract)
-
Adrenal Gland (Endocrine System)
-
Limb (Muscoskeletal System)
This gene is overexpressed in Peripheral blood mononuclear cells (15.5).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for ABCF3 Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of ABCF3 Gene:
ABCF3SOURCE GeneReport for Unigene cluster for ABCF3 Gene:
Hs.361323Evidence on tissue expression from TISSUES for ABCF3 Gene
- Nervous system(4.9)
- Muscle(4.3)
- Skin(4.3)
Primer Products
-
OriGene qPCR primer pairs and template standards for ABCF3
-
OriGene qPCR primer pairs for ABCF3
- genomics-online: primer clones - Search results for available ABCF3 gene related products
Gene Expression Assay Products
No data available for mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ABCF3 Gene
Orthologs for ABCF3 Gene
This gene was present in the common ancestor of eukaryotes.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | ABCF3 34 33 |
|
OneToOne | |
| oppossum (Monodelphis domestica) |
Mammalia | ABCF3 34 |
|
OneToOne | |
| dog (Canis familiaris) |
Mammalia | ABCF3 34 33 |
|
OneToOne | |
| cow (Bos Taurus) |
Mammalia | ABCF3 34 33 |
|
OneToOne | |
| rat (Rattus norvegicus) |
Mammalia | Abcf3 33 |
|
||
| mouse (Mus musculus) |
Mammalia | Abcf3 16 34 33 |
|
||
| platypus (Ornithorhynchus anatinus) |
Mammalia | ABCF3 34 |
|
OneToOne | |
| chicken (Gallus gallus) |
Aves | ABCF3 34 33 |
|
OneToOne | |
| lizard (Anolis carolinensis) |
Reptilia | ABCF3 34 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | LOC100145696 33 |
|
||
| African clawed frog (Xenopus laevis) |
Amphibia | LOC398565 33 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | ABCF3 34 |
|
OneToOne | |
| LOC100331227 33 |
|
||||
| African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP012005 33 |
|
||
| fruit fly (Drosophila melanogaster) |
Insecta | CG9330 34 33 |
|
OneToOne | |
| worm (Caenorhabditis elegans) |
Secernentea | abcf-3 34 33 |
|
OneToOne | |
| A. gosspyii yeast (Ashbya gossypii) |
Saccharomycetes | AGOS_AEL032W 33 |
|
||
| baker's yeast (Saccharomyces cerevisiae) |
Saccharomycetes | GCN20 36 34 33 |
|
||
| K. lactis yeast (Kluyveromyces lactis) |
Saccharomycetes | KLLA0A10857g 33 |
|
||
| thale cress (Arabidopsis thaliana) |
eudicotyledons | GCN3 33 |
|
||
| soybean (Glycine max) |
eudicotyledons | Gma.4290 33 |
|
||
| rice (Oryza sativa) |
Liliopsida | Os.10758 33 |
|
||
| corn (Zea mays) |
Liliopsida | Zm.4768 33 |
|
||
| sea squirt (Ciona savignyi) |
Ascidiacea | CSA.1523 34 |
|
OneToOne | |
| Cin.11475 33 |
|
||||
| bread mold (Neurospora crassa) |
Ascomycetes | NCU04051 33 |
|
||
| fission yeast (Schizosaccharomyces pombe) |
Schizosaccharomycetes | SPBC29A3.09c 33 |
|
||
| sea squirt (Ciona intestinalis) |
Ascidiacea | Cin.11475 33 |
|
- Species where no ortholog for ABCF3 was found in the sources mined by GeneCards:
-
- Actinobacteria (Mycobacterium tuberculosis)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
Evolution for ABCF3 Gene
- ENSEMBL:
- Gene Tree for ABCF3 (if available)
- TreeFam:
- Gene Tree for ABCF3 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for ABCF3: view image
Paralogs for ABCF3 Gene
Variants for ABCF3 Gene
| SNP ID | Clin | Chr 03 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs143852274 | uncertain-significance, Malignant tumor of prostate | 184,189,867(+) | C/T | coding_sequence_variant, missense_variant | |
| rs1000284977 | -- | 184,184,665(+) | C/T | upstream_transcript_variant | |
| rs1000401479 | -- | 184,184,938(+) | A/G | upstream_transcript_variant | |
| rs1000628076 | -- | 184,190,250(+) | T/G | intron_variant | |
| rs1000855803 | -- | 184,192,210(+) | A/G | intron_variant |
Residual Variation Intolerance Score:
26.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
3.80;
58.27% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for ABCF3 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ABCF3
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ABCF3 Gene
Disorders for ABCF3 Gene
Additional Disease Information for ABCF3
No disorders were found for ABCF3 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ABCF3 Gene
Publications for ABCF3 Gene
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
- Characterization of the human ABC superfamily: isolation and mapping of 21 new genes using the expressed sequence tags database. (PMID: 8894702) Allikmets R … Dean M (Human molecular genetics 1996) 2 3 58
- Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing. (PMID: 26871637) Yang X … Vidal M (Cell 2016) 3 58
- Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes. (PMID: 25609649) Li X … Chen J (Molecular systems biology 2015) 3 58
Products for ABCF3 Gene
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- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- OriGene Purified Proteins for ABCF3
- Search Origene for MassSpec and Protein Over-expression Lysates for ABCF3
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- OriGene qPCR primer pairs and template standards for ABCF3
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- OriGene ORF clones in human for ABCF3
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ABCF3
- GenScript: Next-day shipping of latest version cDNA ORF clones for ABCF3 in any vector
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- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
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- Novus Biologicals Antibodies for ABCF3
- Novus Biologicals proteins and lysates for ABCF3
- Novus Biologicals
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- Taconic Biosciences Mouse Models for ABCF3
- Find your next knockout model in the Taconic Knockout Repository
- Genetically Engineered Models Available Immediately
- Humanized Mice
- VectorBuilder custom plasmid, inducible vectors for ABCF3
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- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- antibodies-online: Search results for available ABCF3 related products ranked by validation data
- antibodies-online: Search results for available ABCF3 related products ranked by validation data
- antibodies-online: Search results for available ABCF3 related products ranked by validation data
- GeneTex ABCF3 Antibody for ABCF3
- Search GeneTex for Proteins for ABCF3
- Horizon Cell Lines for ABCF3
- genomics-online: cdna clones - Search results for available ABCF3 gene related products
- orf clones - Search results for available ABCF3 gene related products
- genomics-online: gRNA clones - Search results for available ABCF3 gene related products
- genomics-online: primer clones - Search results for available ABCF3 gene related products
- genomics-online: shRNA clones - Search results for available ABCF3 gene related products
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ABCF3
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- GeneCopoeia miRNA 3'UTR Target clone products for ABCF3
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Sources for ABCF3 Gene
- (1) GeneCards
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- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
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- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
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- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
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- (96) Addgene
- (97) antibodies-online
- (98) CYP
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- (100) SwitchGear Genomics
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- (103) GeneReviews
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- (105) Taconic Biosciences
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- (150) Human Protein Atlas
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- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
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