Aliases for ABCF2P1 Gene

Aliases for ABCF2P1 Gene

  • ATP Binding Cassette Subfamily F Member 2 Pseudogene 1 2 3 5
  • ATP-Binding Cassette, Sub-Family F (GCN20), Member 2 Pseudogene 1 2 3
  • ABCF2P1 5

External Ids for ABCF2P1 Gene

Previous GeneCards Identifiers for ABCF2P1 Gene

  • GC03P088369

Summaries for ABCF2P1 Gene

GeneCards Summary for ABCF2P1 Gene

ABCF2P1 (ATP Binding Cassette Subfamily F Member 2 Pseudogene 1) is a Pseudogene.

Additional gene information for ABCF2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ABCF2P1 Gene

Genomics for ABCF2P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ABCF2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J088309 Enhancer 0.3 Ensembl 0.4 -8.0 -7990 1.8 FOXA1 CGGBP1 ABCF2P1 piR-49423-163 CSNKA2IP LOC105377202 C3orf38
GH03J088307 Enhancer 0.2 Ensembl 0.4 -9.5 -9490 0.8 piR-49423-163 ABCF2P1 LOC105377202 CSNKA2IP C3orf38
GH03J088306 Enhancer 0.2 Ensembl 0.4 -10.2 -10190 0.2 piR-49423-163 ABCF2P1 LOC105377202 CSNKA2IP C3orf38
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ABCF2P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ABCF2P1 Gene

Genomic Locations for ABCF2P1 Gene
chr3:88,317,091-88,319,022
(GRCh38/hg38)
Size:
1,932 bases
Orientation:
Plus strand
chr3:88,366,241-88,368,172
(GRCh37/hg19)
Size:
1,932 bases
Orientation:
Plus strand

Genomic View for ABCF2P1 Gene

Genes around ABCF2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ABCF2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABCF2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ABCF2P1 Gene

Proteins for ABCF2P1 Gene

Post-translational modifications for ABCF2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ABCF2P1 Gene

Domains & Families for ABCF2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ABCF2P1 Gene

Function for ABCF2P1 Gene

Phenotypes From GWAS Catalog for ABCF2P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ABCF2P1 Gene

Localization for ABCF2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ABCF2P1 Gene

Pathways & Interactions for ABCF2P1 Gene

PathCards logo

SuperPathways for ABCF2P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ABCF2P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ABCF2P1 Gene

Drugs & Compounds for ABCF2P1 Gene

No Compound Related Data Available

Transcripts for ABCF2P1 Gene

mRNA/cDNA for ABCF2P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ABCF2P1 Gene

No ASD Table

Relevant External Links for ABCF2P1 Gene

GeneLoc Exon Structure for
ABCF2P1

Expression for ABCF2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ABCF2P1 Gene

mRNA differential expression in normal tissues according to GTEx for ABCF2P1 Gene

This gene is overexpressed in Testis (x5.9), Brain - Cortex (x4.6), and Brain - Cerebellum (x4.4).
genes like me logo Genes that share expression patterns with ABCF2P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ABCF2P1 Gene

Orthologs for ABCF2P1 Gene

Evolution for ABCF2P1 Gene

ENSEMBL:
Gene Tree for ABCF2P1 (if available)
TreeFam:
Gene Tree for ABCF2P1 (if available)

No data available for Orthologs for ABCF2P1 Gene

Paralogs for ABCF2P1 Gene

No data available for Paralogs for ABCF2P1 Gene

Variants for ABCF2P1 Gene

Additional Variant Information for ABCF2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ABCF2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ABCF2P1 Gene

Disorders for ABCF2P1 Gene

No disorders were found for ABCF2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ABCF2P1 Gene

Publications for ABCF2P1 Gene

No publications were found for ABCF2P1 Gene.

Products for ABCF2P1 Gene

Sources for ABCF2P1 Gene