Aliases for ABCF1-DT Gene

Subcategory (RNA class) for ABCF1-DT Gene

lncRNA

Aliases for ABCF1-DT Gene

  • ABCF1 Divergent Transcript 2 3

External Ids for ABCF1-DT Gene

Previous GeneCards Identifiers for ABCF1-DT Gene

  • GC06U903645

Summaries for ABCF1-DT Gene

GeneCards Summary for ABCF1-DT Gene

ABCF1-DT (ABCF1 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ABCF1-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ABCF1-DT Gene

Genomics for ABCF1-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ABCF1-DT Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J030570 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -1.2 -1168 4.9 RNF2 SP1 HNRNPL CREB1 GATAD2A PRDM10 ZNF629 TFE3 ZNF512 LEF1 ABCF1 ABCF1-DT HSALNG0049163 NONHSAG043414.2 GNL1 DDX39B PPP1R10 MDC1 HCG18 GTF2H4
GH06J030565 Enhancer 0.6 Ensembl 0.4 +5.1 5101 0.4 SP1 POLR2A FOXA2 ATF3 YY1 GABPA ZBTB33 NFIB HNF4A RXRA MICD LINC02569 C6orf136 ABCF1 ABCF1-DT GNL1 piR-45035-157
GH06J030566 Enhancer 0.5 Ensembl 0.4 +5.6 5600 0.2 POLR2A GTF2F1 ATF3 YY1 ZBTB33 NFIB RXRA MAX MEIS2 LINC02569 C6orf136 ABCF1 ABCF1-DT GNL1 piR-45035-157
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ABCF1-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ABCF1-DT Gene

Genomic Locations for ABCF1-DT Gene
chr6:30,563,613-30,571,301
(GRCh38/hg38)
Size:
7,689 bases
Orientation:
Minus strand

Genomic View for ABCF1-DT Gene

Genes around ABCF1-DT on UCSC Golden Path with GeneCards custom track
ABCF1-DT in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ABCF1-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABCF1-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for ABCF1-DT Gene

Post-translational modifications for ABCF1-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for ABCF1-DT Gene

Domains & Families for ABCF1-DT Gene

Gene Families for ABCF1-DT Gene

genes like me logo Genes that share domains with ABCF1-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ABCF1-DT Gene

Function for ABCF1-DT Gene

Phenotypes From GWAS Catalog for ABCF1-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ABCF1-DT Gene

Localization for ABCF1-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ABCF1-DT Gene

Pathways & Interactions for ABCF1-DT Gene

PathCards logo

SuperPathways for ABCF1-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for ABCF1-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ABCF1-DT Gene

Drugs & Compounds for ABCF1-DT Gene

No Compound Related Data Available

Transcripts for ABCF1-DT Gene

ABCF1-DT in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ABCF1-DT Gene

No ASD Table

Relevant External Links for ABCF1-DT Gene

GeneLoc Exon Structure for
ABCF1-DT

No data available for mRNA/cDNA for ABCF1-DT Gene

Expression for ABCF1-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ABCF1-DT Gene

Orthologs for ABCF1-DT Gene

No data available for Orthologs and Evolution for ABCF1-DT Gene

Paralogs for ABCF1-DT Gene

No data available for Paralogs for ABCF1-DT Gene

Variants for ABCF1-DT Gene

Additional dbSNP identifiers (rs#s) for ABCF1-DT Gene

Additional Variant Information for ABCF1-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ABCF1-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ABCF1-DT Gene

Disorders for ABCF1-DT Gene

No disorders were found for ABCF1-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ABCF1-DT Gene

Publications for ABCF1-DT Gene

No publications were found for ABCF1-DT Gene.

No data available for Mastermind for ABCF1-DT Gene

Products for ABCF1-DT Gene

Sources for ABCF1-DT Gene