ABCC1 Gene (Protein Coding)

ATP Binding Cassette Subfamily C Member 1

GC16P015949
GIFtS:
49
The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra-and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This full transporter is a member of the MRP subfamily which is involved in multi-drug ... See more...

Aliases for ABCC1 Gene

Aliases for ABCC1 Gene

  • ATP Binding Cassette Subfamily C Member 1 2 3 5
  • ATP-Binding Cassette, Sub-Family C (CFTR/MRP), Member 1 2 3
  • Glutathione-S-Conjugate-Translocating ATPase ABCC1 3 4
  • Multidrug Resistance-Associated Protein 1 3 4
  • Leukotriene C(4) Transporter 3 4
  • LTC4 Transporter 3 4
  • MRP1 3 4
  • MRP 3 4
  • ATP-Binding Cassette Transporter Variant ABCC1delta-Ex13&14 3
  • ATP-Binding Cassette Transporter Variant ABCC1delta-Ex25&26 3
  • ATP-Binding Cassette Transporter Variant ABCC1delta-Ex13 3
  • ATP-Binding Cassette Transporter Variant ABCC1delta-Ex25 3
  • ATP-Binding Cassette Sub-Family C Member 1 4
  • Multidrug Resistance Associated Protein 1 2
  • EC 3.6.3.44 54
  • EC 7.6.2.2 4
  • EC 7.6.2.3 4
  • EC 3.6.3 54
  • ABC29 3
  • ABCC 3
  • GS-X 3

External Ids for ABCC1 Gene

Previous HGNC Symbols for ABCC1 Gene

  • MRP
  • MRP1

Previous GeneCards Identifiers for ABCC1 Gene

  • GC16P015870
  • GC16P015325
  • GC16P016009
  • GC16P015950
  • GC16P016043
  • GC16P015437

Summaries for ABCC1 Gene

Entrez Gene Summary for ABCC1 Gene

  • The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra-and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This full transporter is a member of the MRP subfamily which is involved in multi-drug resistance. This protein functions as a multispecific organic anion transporter, with oxidized glutatione, cysteinyl leukotrienes, and activated aflatoxin B1 as substrates. This protein also transports glucuronides and sulfate conjugates of steroid hormones and bile salts. Alternatively spliced variants of this gene have been described but their full-length nature is unknown. [provided by RefSeq, Apr 2012]

GeneCards Summary for ABCC1 Gene

ABCC1 (ATP Binding Cassette Subfamily C Member 1) is a Protein Coding gene. Diseases associated with ABCC1 include Dubin-Johnson Syndrome and Pseudoxanthoma Elasticum. Among its related pathways are S1P3 pathway and Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds. Gene Ontology (GO) annotations related to this gene include transporter activity and ATPase activity, coupled to transmembrane movement of substances. An important paralog of this gene is ABCC3.

UniProtKB/Swiss-Prot Summary for ABCC1 Gene

  • Mediates export of organic anions and drugs from the cytoplasm (PubMed:7961706, PubMed:16230346, PubMed:9281595, PubMed:10064732, PubMed:11114332). Mediates ATP-dependent transport of glutathione and glutathione conjugates, leukotriene C4, estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics (PubMed:7961706, PubMed:16230346, PubMed:9281595, PubMed:10064732, PubMed:11114332). Confers resistance to anticancer drugs by decreasing accumulation of drug in cells, and by mediating ATP- and GSH-dependent drug export (PubMed:9281595). Hydrolyzes ATP with low efficiency (PubMed:16230346). Catalyzes the export of sphingosine 1-phosphate from mast cells independently of their degranulation (PubMed:17050692). Participates in inflammatory response by allowing export of leukotriene C4 from leukotriene C4-synthezing cells (By similarity).

Tocris Summary for ABCC1 Gene

  • ATP-binding cassette (ABC) transporters form one of the largest groups of paralogous protein families that have a wide diversity of functions and substrates. Specificity has been shown for small and large molecules, highly charged molecules and highly hydrophobic systems.

Gene Wiki entry for ABCC1 Gene

Additional gene information for ABCC1 Gene

No data available for CIViC Summary , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ABCC1 Gene

Genomics for ABCC1 Gene

GeneHancer (GH) Regulatory Elements for ABCC1 Gene

Promoters and enhancers for ABCC1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ABCC1 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the ABCC1 gene promoter:
  • AP-1
  • c-Fos

Genomic Locations for ABCC1 Gene

Genomic Locations for ABCC1 Gene
chr16:15,949,577-16,143,074
(GRCh38/hg38)
Size:
193,498 bases
Orientation:
Plus strand
chr16:16,043,434-16,236,931
(GRCh37/hg19)
Size:
193,498 bases
Orientation:
Plus strand

Genomic View for ABCC1 Gene

Genes around ABCC1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ABCC1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABCC1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ABCC1 Gene

Proteins for ABCC1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for ABCC1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P33527-MRP1_HUMAN
    Recommended name:
    Multidrug resistance-associated protein 1
    Protein Accession:
    P33527
    Secondary Accessions:
    • A3RJX2
    • C9JPJ4
    • O14819
    • O43333
    • P78419
    • Q59GI9
    • Q9UQ97
    • Q9UQ99
    • Q9UQA0

    Protein attributes for ABCC1 Gene

    Size:
    1531 amino acids
    Molecular mass:
    171591 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for ABCC1 Gene

    Alternative splice isoforms for ABCC1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ABCC1 Gene

Protein Expression for ABCC1 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Selected DME Specific Peptides for ABCC1 Gene

P33527:
  • LSGGQKQRV
  • SVGQRQL

Post-translational modifications for ABCC1 Gene

  • Glycosylation at Asn19, Asn23, and Asn1006
  • Ubiquitination at Lys303, Lys307, Lys315, Lys488, Lys503, Lys513, Lys636, Lys773, Lys814, Lys891, Lys908, Lys1322, Lys1333, Lys1360, Lys1369, and Lys1502
  • Modification sites at PhosphoSitePlus

Other Protein References for ABCC1 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

  • Abcam antibodies for ABCC1

Domains & Families for ABCC1 Gene

Gene Families for ABCC1 Gene

HGNC:
IUPHAR :
Human Protein Atlas (HPA):
  • Cancer-related genes
  • FDA approved drug targets
  • Plasma proteins
  • Predicted membrane proteins
  • Transporters

Protein Domains for ABCC1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ABCC1 Gene

GenScript: Design optimal peptide antigens:
  • Leukotriene C(4) transporter (MRP1_HUMAN)
  • Multidrug resistance protein (Q9UQ98_HUMAN)

Graphical View of Domain Structure for InterPro Entry

P33527

UniProtKB/Swiss-Prot:

MRP1_HUMAN :
  • Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
Family:
  • Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
genes like me logo Genes that share domains with ABCC1: view

Function for ABCC1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Molecular function for ABCC1 Gene

UniProtKB/Swiss-Prot Function:
Mediates export of organic anions and drugs from the cytoplasm (PubMed:7961706, PubMed:16230346, PubMed:9281595, PubMed:10064732, PubMed:11114332). Mediates ATP-dependent transport of glutathione and glutathione conjugates, leukotriene C4, estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics (PubMed:7961706, PubMed:16230346, PubMed:9281595, PubMed:10064732, PubMed:11114332). Confers resistance to anticancer drugs by decreasing accumulation of drug in cells, and by mediating ATP- and GSH-dependent drug export (PubMed:9281595). Hydrolyzes ATP with low efficiency (PubMed:16230346). Catalyzes the export of sphingosine 1-phosphate from mast cells independently of their degranulation (PubMed:17050692). Participates in inflammatory response by allowing export of leukotriene C4 from leukotriene C4-synthezing cells (By similarity).
UniProtKB/Swiss-Prot CatalyticActivity:
Reaction=ATP + H(2)O + xenobiotic(Side 1) = ADP + phosphate + xenobiotic(Side 2).; EC=7.6.2.2; Evidence=. ;.
UniProtKB/Swiss-Prot CatalyticActivity:
Reaction=an S-substituted glutathione(in) + ATP + H2O = ADP + an S-substituted glutathione(out) + H(+) + phosphate; Xref=Rhea:RHEA:19121, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:90779, ChEBI:CHEBI:456216; EC=7.6.2.3; Evidence=. ;.
UniProtKB/Swiss-Prot CatalyticActivity:
Reaction=ATP + H2O + sphing-4-enine 1-phosphate(in) = ADP + H(+) + phosphate + sphing-4-enine 1-phosphate(out); Xref=Rhea:RHEA:38951, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:60119, ChEBI:CHEBI:456216; Evidence=. ; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:38952; Evidence=. ;.
UniProtKB/Swiss-Prot CatalyticActivity:
Reaction=ATP + H2O + leukotriene C4(in) = ADP + H(+) + leukotriene C4(out) + phosphate; Xref=Rhea:RHEA:38963, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:57973, ChEBI:CHEBI:456216; Evidence={ECO:0000269 PubMed:7961706, ECO:0000269 PubMed:9281595}; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:38964; Evidence=. ;.
UniProtKB/Swiss-Prot CatalyticActivity:
Reaction=17beta-estradiol 17-O-(beta-D-glucuronate)(in) + ATP + H2O = 17beta-estradiol 17-O-(beta-D-glucuronate)(out) + ADP + H(+) + phosphate; Xref=Rhea:RHEA:60128, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:82961, ChEBI:CHEBI:456216; Evidence=. ; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:60129; Evidence=. ;.
UniProtKB/Swiss-Prot CatalyticActivity:
Reaction=ATP + daunorubicin(in) + H2O = ADP + daunorubicin(out) + H(+) + phosphate; Xref=Rhea:RHEA:33147, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:64677, ChEBI:CHEBI:456216; Evidence=. ; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:33148; Evidence=. ;.
UniProtKB/Swiss-Prot CatalyticActivity:
Reaction=ATP + H2O + vincristine(in) = ADP + H(+) + phosphate + vincristine(out); Xref=Rhea:RHEA:60160, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:143658, ChEBI:CHEBI:456216; Evidence=. ; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:60161; Evidence=. ;.
UniProtKB/Swiss-Prot EnzymeRegulation:
MK 571 inhibits sphingosine 1-phosphate and leukotriene C4 export.
UniProtKB/Swiss-Prot BiophysicochemicalProperties:
Kinetic parameters: KM=97 nM for leukotriene C4 {ECO:0000269 PubMed:7961706}; KM=19 uM for ATP {ECO:0000269 PubMed:7961706}; KM=98 nM for leukotriene C4 {ECO:0000269 PubMed:9281595}; KM=4.8 uM for 17beta-estradiol 17-glucosiduronic acid {ECO:0000269 PubMed:9281595}; Vmax=100 pmol/min/mg enzyme for leukotriene C4 transport {ECO:0000269 PubMed:7961706}; Vmax=920 pmol/min/mg enzyme for leukotriene C4 transport {ECO:0000269 PubMed:9281595}; Vmax=1.4 nmol/min/mg enzyme for 17beta-estradiol 17- glucosiduronic acid transport {ECO:0000269 PubMed:9281595};
GENATLAS Biochemistry:
ATP binding cassettte superfamily,subfamily C (CFTR/MRP),member 1,ubiquitously expressed,with several alternatively spliced forms,also containing a CGG repeat in 5'utr

Enzyme Numbers (IUBMB) for ABCC1 Gene

Phenotypes From GWAS Catalog for ABCC1 Gene

Gene Ontology (GO) - Molecular Function for ABCC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005524 ATP binding IEA --
GO:0008559 xenobiotic transmembrane transporting ATPase activity IBA 21873635
GO:0015420 cobalamin-transporting ATPase activity TAS --
GO:0015431 glutathione S-conjugate-exporting ATPase activity IEA --
GO:0016787 hydrolase activity IEA --
genes like me logo Genes that share ontologies with ABCC1: view
genes like me logo Genes that share phenotypes with ABCC1: view

Animal Models for ABCC1 Gene

MGI Knock Outs for ABCC1:

Animal Model Products

  • Taconic Biosciences Mouse Models for ABCC1

CRISPR Products

Clone Products

  • Addgene plasmids for ABCC1

No data available for Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for ABCC1 Gene

Localization for ABCC1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ABCC1 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ABCC1 gene
Compartment Confidence
plasma membrane 5
extracellular 1
cytoskeleton 1
mitochondrion 1
nucleus 1
cytosol 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Plasma membrane (3)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ABCC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005774 vacuolar membrane IBA 21873635
GO:0005886 plasma membrane TAS,IDA --
GO:0005887 integral component of plasma membrane IEA --
GO:0016020 membrane IBA,IEA 21873635
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with ABCC1: view

Pathways & Interactions for ABCC1 Gene

genes like me logo Genes that share pathways with ABCC1: view

SIGNOR curated interactions for ABCC1 Gene

Is activated by:

Gene Ontology (GO) - Biological Process for ABCC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006691 leukotriene metabolic process TAS --
GO:0006855 drug transmembrane transport IBA 21873635
GO:0009235 cobalamin metabolic process TAS --
GO:0015889 cobalamin transport IEA --
GO:0034775 glutathione transmembrane transport IBA 21873635
genes like me logo Genes that share ontologies with ABCC1: view

Drugs & Compounds for ABCC1 Gene

Products:

  1. Drug

(134) Drugs for ABCC1 Gene - From: DrugBank, PharmGKB, ApexBio, DGIdb, HMDB, Tocris, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Doxorubicin Approved, Investigational Pharma Transporter, substrate, inhibitor Topo II inhibitor,immunosuppresive antineoplastic antibiotic 2016
Irinotecan Approved, Investigational Pharma Transporter, substrate Topoisomerase I inhibitor, TOPO I inhibitor, Topoisomerase 1 Inhibitors 1326
Methotrexate Approved Pharma Transporter, substrate, inhibitor Folate antagonist,inhibits DFHR 1757
Ritonavir Approved, Investigational Pharma Transporter, inhibitor, inducer HIV protease inhibitor 941
Sulfinpyrazone Approved Pharma Target, Transporter, inhibitor, modulator 0

(47) Additional Compounds for ABCC1 Gene - From: HMDB and Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
4'-Hydroxydiclofenac
  • (O-(2,6-dichloro-4-hydroxyanilino)Phenyl)acetic acid
  • 4'-Hydroxy diclofenac
  • 4'-OH DCF
  • (O-(2,6-dichloro-4-hydroxyanilino)Phenyl)acetate
  • {2-[(2,6-dichloro-4-hydroxyphenyl)amino]phenyl}acetic acid
 64118-84-9
O-Desmethylverapamil (D-702)

(3) Tocris Compounds for ABCC1 Gene

Compound Action Cas Number
Fumitremorgin C Inhibitor of BCRP-mediated multidrug resistance 118974-02-0
Ko 143 Potent and selective BCRP inhibitor 461054-93-3
Pyrimethamine Potent inhibitor of multidrug and toxin extrusion (MATE) transporters; also DHFR and STAT3 inhibitor 58-14-0

(9) ApexBio Compounds for ABCC1 Gene

Compound Action Cas Number
CP 100356 hydrochloride 142715-48-8
Dofequidar 129716-58-1
Dofequidar fumarate MDR reversal agent 153653-30-6
Fumitremorgin C 118974-02-0
KS 176 1253452-78-6
Reversan 313397-13-6
Tariquidar methanesulfonate, hydrate P-glycoprotein inhibitor, potent and selective 625375-83-9
Vinblastine sulfate Anti-mitotic agent 143-67-9
Zosuquidar MDR modulator 167354-41-8
genes like me logo Genes that share compounds with ABCC1: view

Drug Products

Transcripts for ABCC1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ABCC1 Gene

(7) REFSEQ mRNAs :
(12) Additional mRNA sequences :
(200) Selected AceView cDNA sequences:
(8) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Clone Products

  • Addgene plasmids for ABCC1

Alternative Splicing Database (ASD) splice patterns (SP) for ABCC1 Gene

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15a · 15b ^ 16 ^ 17 ^ 18 ^ 19 ^ 20a · 20b ^ 21 ^ 22 ^
SP1: - - -
SP2: - -
SP3:
SP4:

ExUns: 23 ^ 24a · 24b ^ 25 ^ 26 ^ 27 ^ 28 ^ 29 ^ 30 ^ 31 ^ 32a · 32b
SP1:
SP2:
SP3:
SP4:

Relevant External Links for ABCC1 Gene

GeneLoc Exon Structure for
ABCC1
ECgene alternative splicing isoforms for
ABCC1

Expression for ABCC1 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ABCC1 Gene

mRNA expression in normal human tissues for ABCC1 Gene
mRNA expression by GTEx for ABCC1 GenemRNA expression by BioGPS for ABCC1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for ABCC1 Gene

This gene is overexpressed in Breast (29.1) and Nasal epithelium (28.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for ABCC1 Gene



Protein tissue co-expression partners for ABCC1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ABCC1 Gene:

ABCC1

SOURCE GeneReport for Unigene cluster for ABCC1 Gene:

Hs.391464

mRNA Expression by UniProt/SwissProt for ABCC1 Gene:

P33527-MRP1_HUMAN
Tissue specificity: Lung, testis and peripheral blood mononuclear cells.

Evidence on tissue expression from TISSUES for ABCC1 Gene

  • Liver(4.5)
  • Nervous system(4.5)
  • Blood(2.6)
  • Lung(2.6)
  • Intestine(2.4)
  • Kidney(2.1)
genes like me logo Genes that share expression patterns with ABCC1: view

No data available for mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for ABCC1 Gene

Orthologs for ABCC1 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for ABCC1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia ABCC1 33 32
  • 98.91 (n)
 OneToOne
dog
(Canis familiaris)
 Mammalia MRP1 33
  • 91 (a)
 OneToOne
ABCC1 32
  • 88.63 (n)
cow
(Bos Taurus)
 Mammalia ABCC1 33 32
  • 88.78 (n)
 OneToOne
oppossum
(Monodelphis domestica)
 Mammalia ABCC1 33
  • 85 (a)
 OneToOne
platypus
(Ornithorhynchus anatinus)
 Mammalia ABCC1 33
  • 84 (a)
 OneToOne
mouse
(Mus musculus)
 Mammalia Abcc1 17 33 32
  • 83.84 (n)
rat
(Rattus norvegicus)
 Mammalia Abcc1 32
  • 83.03 (n)
chicken
(Gallus gallus)
 Aves ABCC1 33 32
  • 71.44 (n)
 OneToOne
lizard
(Anolis carolinensis)
 Reptilia ABCC1 33
  • 72 (a)
 OneToOne
tropical clawed frog
(Silurana tropicalis)
 Amphibia Str.3748 32
zebrafish
(Danio rerio)
 Actinopterygii ABCC1 33
  • 70 (a)
 OneToOne
abcc1 32
  • 67.5 (n)
fruit fly
(Drosophila melanogaster)
 Insecta CG6214 34
  • 47 (a)
Sur 34
  • 47 (a)
worm
(Caenorhabditis elegans)
 Secernentea mrp-2 34 32
  • 51.46 (n)
mrp-7 34
  • 40 (a)
mrp-8 33 34
  • 37 (a)
 ManyToMany
C18C4.2 34
  • 24 (a)
baker's yeast
(Saccharomyces cerevisiae)
 Saccharomycetes YCF1 33
  • 40 (a)
 OneToMany
thale cress
(Arabidopsis thaliana)
 eudicotyledons MRP5 32
  • 44.74 (n)
Alicante grape
(Vitis vinifera)
 eudicotyledons Vvi.3011 32
rice
(Oryza sativa)
 Liliopsida Os03g0142800 32
  • 47.21 (n)
Os.5631 32
wheat
(Triticum aestivum)
 Liliopsida Ta.28932 32
barley
(Hordeum vulgare)
 Liliopsida Hv.4445 32
sea squirt
(Ciona savignyi)
 Ascidiacea -- 33
  • 53 (a)
 ManyToMany
Cin.6283 32
sea squirt
(Ciona intestinalis)
 Ascidiacea Cin.6283 32
Species where no ortholog for ABCC1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)

Evolution for ABCC1 Gene

ENSEMBL:
Gene Tree for ABCC1 (if available)
TreeFam:
Gene Tree for ABCC1 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for ABCC1: view image

Paralogs for ABCC1 Gene

Paralogs for ABCC1 Gene

(22) SIMAP similar genes for ABCC1 Gene using alignment to 7 proteins:

  • MRP1_HUMAN
  • G0ZCM3_HUMAN
  • G0ZCM4_HUMAN
  • G0ZCM5_HUMAN
  • G0ZCM6_HUMAN
  • I3L2H9_HUMAN
  • I3L4X2_HUMAN
genes like me logo Genes that share paralogs with ABCC1: view

Variants for ABCC1 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Sequence variations from dbSNP and Humsavar for ABCC1 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs11075295 uncertain-significance, Familial cancer of breast 16,083,830(+) G/A intron_variant
rs11866794 uncertain-significance, Familial cancer of breast 16,075,717(+) G/A/C intron_variant
rs35623 uncertain-significance, Familial cancer of breast 16,075,608(+) G/T intron_variant
rs35625 uncertain-significance, Familial cancer of breast 16,075,709(+) C/T intron_variant
rs35626 uncertain-significance, Familial cancer of breast 16,076,758(+) G/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ABCC1 Gene

Variant ID Type Subtype PubMed ID
dgv4924n54 CNV gain 21841781
esv1033070 CNV insertion 17803354
esv2399145 CNV deletion 18987734
esv2661498 CNV deletion 23128226
esv2667672 CNV deletion 23128226
esv2674034 CNV deletion 23128226
esv2714015 CNV deletion 23290073
esv2714022 CNV deletion 23290073
esv2714023 CNV deletion 23290073
esv2714024 CNV deletion 23290073
esv2714025 CNV deletion 23290073
esv2714026 CNV deletion 23290073
esv2714027 CNV deletion 23290073
esv2758633 CNV gain+loss 17122850
esv2763133 CNV loss 21179565
esv28545 CNV loss 19812545
esv34006 CNV loss 18971310
esv3553169 CNV deletion 23714750
esv3553170 CNV deletion 23714750
esv3638041 CNV gain 21293372
esv3638047 CNV gain 21293372
esv3638048 CNV gain 21293372
esv3638049 CNV loss 21293372
esv3638050 CNV gain 21293372
esv3638051 CNV gain 21293372
esv3638052 CNV gain 21293372
nsv1047898 CNV loss 25217958
nsv1049647 CNV gain+loss 25217958
nsv1053451 CNV gain 25217958
nsv1070754 CNV deletion 25765185
nsv1121517 CNV deletion 24896259
nsv1125134 CNV deletion 24896259
nsv1134504 CNV deletion 24896259
nsv1745 CNV insertion 18451855
nsv435664 CNV deletion 17901297
nsv442392 CNV loss 18776908
nsv457428 CNV gain 19166990
nsv457436 CNV gain 19166990
nsv457437 CNV gain 19166990
nsv469785 CNV gain+loss 16826518
nsv472914 CNV novel sequence insertion 20440878
nsv571546 CNV loss 21841781
nsv571547 CNV gain 21841781
nsv833149 CNV loss 17160897

Variation tolerance for ABCC1 Gene

Residual Variation Intolerance Score: 2.89% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.96; 59.78% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ABCC1 Gene

Human Gene Mutation Database (HGMD)
ABCC1
SNPedia medical, phenotypic, and genealogical associations of SNPs for
ABCC1

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ABCC1 Gene

Disorders for ABCC1 Gene

MalaCards: The human disease database

(20) MalaCards diseases for ABCC1 Gene - From: HGMD, DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
dubin-johnson syndrome
  • djs
pseudoxanthoma elasticum
  • pxe
uterine sarcoma
  • uterine corpus sarcoma
colchicine resistance
  • colchicine sensitivity; clcs
microsporidiosis
  • infection by microspora
- elite association - COSMIC cancer census association via MalaCards
Search ABCC1 in MalaCards View complete list of genes associated with diseases

Additional Disease Information for ABCC1

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
genes like me logo Genes that share disorders with ABCC1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ABCC1 Gene

Publications for ABCC1 Gene

  1. 5-lipoxygenase pharmacogenetics in asthma: overlap with Cys-leukotriene receptor antagonist loci. (PMID: 19214143) Tantisira KG … Weiss ST (Pharmacogenetics and genomics 2009) 3 23 43 56
  2. Methotrexate (MTX) pathway gene polymorphisms and their effects on MTX toxicity in Caucasian and African American patients with rheumatoid arthritis. (PMID: 18381794) Ranganathan P … McLeod HL (The Journal of rheumatology 2008) 3 23 43 56
  3. Pharmacogenetic assessment of toxicity and outcome after platinum plus taxane chemotherapy in ovarian cancer: the Scottish Randomised Trial in Ovarian Cancer. (PMID: 17925548) Marsh S … Brown R (Journal of clinical oncology : official journal of the American Society of Clinical Oncology 2007) 3 23 43 56
  4. Role of ABCC1 in export of sphingosine-1-phosphate from mast cells. (PMID: 17050692) Mitra P … Spiegel S (Proceedings of the National Academy of Sciences of the United States of America 2006) 3 4 23 56
  5. Influence of ABCB1, ABCC1, ABCC2, and ABCG2 haplotypes on the cellular exposure of nelfinavir in vivo. (PMID: 16041239) Colombo S … Swiss HIV Cohort Study (Pharmacogenetics and genomics 2005) 3 23 43 56

ExternalLinks

View latest publications for ABCC1 gene in Mastermind

Products for ABCC1 Gene

  • Addgene plasmids for ABCC1