Aliases for AB372790 Gene

Subcategory (RNA class) for AB372790 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372790 Gene

No Aliases found

No data available for External Ids for AB372790 Gene

Summaries for AB372790 Gene

GeneCards Summary for AB372790 Gene

AB372790 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372790 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372790 Gene

Genomics for AB372790 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372790 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J029298 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +1.8 1751 6.6 SP1 GATAD2A HNRNPL PRDM10 ZNF629 TFE3 RFX1 LEF1 SOX13 IKZF1 AB372790 lnc-CCT8-6 BACH1 ENSG00000231125 RPL23P2 USP16 LTN1 RPL12P9 N6AMT1 LINC00189
GH21J029304 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +7.0 6968 2.8 GATAD2A IKZF1 FOXA1 PRDM1 ZSCAN4 PKNOX1 NR2C1 DPF2 YY1 CEBPA LTN1 ENSG00000231125 RPL12P9 CCT8 USP16 ENSG00000224649 AB372790 NONHSAG032623.2 BACH1 GRIK1-AS2
GH21J029314 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +17.0 16954 2.4 POLR2A REST NR2C1 ZNF24 DPF2 SOX6 EP300 MGA HMBOX1 TAF9B MAP3K7CL NONHSAG032623.2 AB372790 GRIK1-AS2 BACH1 GRIK1
GH21J029309 Promoter/Enhancer 0.8 EPDnew dbSUPER 0.4 +10.9 10929 0.1 MGA TFDP1 ZNF592 L3MBTL2 BACH1 AB372790 NONHSAG032623.2 GRIK1-AS2 GRIK1
GH21J029310 Enhancer 0.5 dbSUPER 0.4 +11.7 11703 1.2 POLR2A MGA GATAD2A EHMT2 TFDP1 ZNF592 ATF4 ZNF133 L3MBTL2 MAP3K7CL AB372790 NONHSAG032623.2 BACH1 GRIK1-AS2 GRIK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372790 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372790 Gene

Genomic Locations for AB372790 Gene
chr21:29,298,950-29,298,966
(GRCh38/hg38)
Size:
17 bases
Orientation:
Plus strand

Genomic View for AB372790 Gene

Genes around AB372790 on UCSC Golden Path with GeneCards custom track
AB372790 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372790 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372790 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372790 Gene

Proteins for AB372790 Gene

Post-translational modifications for AB372790 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372790 Gene

Domains & Families for AB372790 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372790 Gene

Function for AB372790 Gene

Phenotypes From GWAS Catalog for AB372790 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372790 Gene

Localization for AB372790 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372790 Gene

Pathways & Interactions for AB372790 Gene

PathCards logo

SuperPathways for AB372790 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372790 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372790 Gene

Drugs & Compounds for AB372790 Gene

No Compound Related Data Available

Transcripts for AB372790 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372790 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003D7951_9606 miRNA 17 1

ENA: AB372790.1:1..17:ncRNA,

AB372790 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372790 Gene

No ASD Table

Relevant External Links for AB372790 Gene

GeneLoc Exon Structure for
AB372790

No data available for mRNA/cDNA for AB372790 Gene

Expression for AB372790 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372790 Gene

Orthologs for AB372790 Gene

No data available for Orthologs and Evolution for AB372790 Gene

Paralogs for AB372790 Gene

No data available for Paralogs for AB372790 Gene

Variants for AB372790 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372790 Gene

Disorders for AB372790 Gene

No disorders were found for AB372790 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372790 Gene

Publications for AB372790 Gene

No publications were found for AB372790 Gene.

No data available for Mastermind for AB372790 Gene

Products for AB372790 Gene

Sources for AB372790 Gene