AB372785-001 Gene (RNA Gene)

 

GC10M077330
GIFtS:
3
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Aliases for AB372785-001 Gene

Subcategory (RNA class) for AB372785-001 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372785-001 Gene

No Aliases found

No data available for External Ids for AB372785-001 Gene

Summaries for AB372785-001 Gene

GeneCards Summary for AB372785-001 Gene

AB372785-001 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372785-001 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372785-001 Gene

Genomics for AB372785-001 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for AB372785-001 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH10J077333 Enhancer 1 Ensembl ENCODE 0.7 -3.4 -3430 3.2 GATAD2A ZNF629 REST FOXA1 ZIC2 RXRB POLR2A SP1 CEBPA SOX13 KCNMA1 AB372785-001 KCNMA1-AS3
GH10J077319 Enhancer 0.8 Ensembl ENCODE 0.4 +9.4 9370 2.8 CEBPB NFE2 ZNF316 FOSL1 MAFG ZFHX2 MAFK BHLHE40 JUND GLIS1 KCNMA1 KCNMA1-AS3 AB372785-001 ENSG00000224500
GH10J077313 Enhancer 0.5 Ensembl 0.4 +16.0 15971 2 FOXA1 MNT ZSCAN5C ZBTB40 GATA3 SMARCA4 ENSG00000224500 KCNMA1-AS3 AB372785-001 KCNMA1
GH10J077348 Enhancer 0.4 Ensembl dbSUPER 0.4 -17.9 -17930 0.2 ZBTB40 KCNMA1-AS3 AB372785-001 KCNMA1
GH10J077318 Enhancer 0.3 Ensembl 0.4 +11.3 11270 0.2 FOXA1 GATA3 KCNMA1-AS3 ENSG00000224500 AB372785-001 KCNMA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372785-001 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372785-001 Gene

Genomic Locations for AB372785-001 Gene
chr10:77,330,152-77,330,171
(GRCh38/hg38)
Size:
20 bases
Orientation:
Minus strand

Genomic View for AB372785-001 Gene

Genes around AB372785-001 on UCSC Golden Path with GeneCards custom track
AB372785-001 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372785-001 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372785-001 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372785-001 Gene

Proteins for AB372785-001 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for AB372785-001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372785-001 Gene

Domains & Families for AB372785-001 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372785-001 Gene

Function for AB372785-001 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372785-001 Gene

Localization for AB372785-001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372785-001 Gene

Pathways & Interactions for AB372785-001 Gene

PathCards logo

SuperPathways for AB372785-001 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372785-001 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372785-001 Gene

Drugs & Compounds for AB372785-001 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for AB372785-001 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372785-001 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000019EDD4_9606 miRNA 20 1

ENA: AB372785.1:1..20:ncRNA,

AB372785-001 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372785-001 Gene

No ASD Table

Relevant External Links for AB372785-001 Gene

GeneLoc Exon Structure for
AB372785-001

No data available for mRNA/cDNA for AB372785-001 Gene

Expression for AB372785-001 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372785-001 Gene

Orthologs for AB372785-001 Gene

No data available for Orthologs and Evolution for AB372785-001 Gene

Paralogs for AB372785-001 Gene

No data available for Paralogs for AB372785-001 Gene

Variants for AB372785-001 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372785-001 Gene

Disorders for AB372785-001 Gene

No disorders were found for AB372785-001 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372785-001 Gene

Publications for AB372785-001 Gene

No publications were found for AB372785-001 Gene.

No data available for Mastermind for AB372785-001 Gene

Products for AB372785-001 Gene

Sources for AB372785-001 Gene