Aliases for AB372778-027 Gene

Subcategory (RNA class) for AB372778-027 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372778-027 Gene

No Aliases found

No data available for External Ids for AB372778-027 Gene

Summaries for AB372778-027 Gene

GeneCards Summary for AB372778-027 Gene

AB372778-027 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372778-027 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372778-027 Gene

Genomics for AB372778-027 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372778-027 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J008423 Enhancer 0.4 Ensembl ENCODE 600.7 +1.7 1697 0.8 RAD21 AB372778-027 ENSG00000253505 FAM86B3P PRAG1 CLDN23
GH08J008417 Enhancer 0.8 Ensembl ENCODE 0.7 -2.5 -2494 6.3 PRDM1 SP1 CEBPB ZBTB17 EP300 FOSL2 ZNF189 GLIS1 NFE2L2 SMARCA4 FAM86B3P ALG1L13P AB372778-027 ENSG00000253505 piR-32287-122 PRAG1 CLDN23
GH08J008407 Enhancer 0.8 Ensembl 0.4 -14.6 -14640 0.8 ZNF221 ZNF629 ZNF692 ZNF174 ZNF776 ZNF239 ZNF561 SCRT2 ZBTB44 ZBTB20 piR-32287-122 FAM86B3P ENPP7P1 AB372778-027 PRAG1 CLDN23
GH08J008411 Enhancer 0.6 Ensembl ENCODE 0.4 -9.9 -9887 1.5 CEBPB EP300 CEBPG KLF1 MZF1 FAM86B3P AB372778-027 piR-32287-122 PRAG1 CLDN23
GH08J008408 Enhancer 0.6 Ensembl ENCODE 0.4 -13.4 -13373 1.1 MAFF POLR2A SMARCA4 FAM86B3P ENPP7P1 piR-32287-122 AB372778-027 PRAG1 CLDN23
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372778-027 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372778-027 Gene

Genomic Locations for AB372778-027 Gene
chr8:8,422,241-8,422,258
(GRCh38/hg38)
Size:
18 bases
Orientation:
Plus strand

Genomic View for AB372778-027 Gene

Genes around AB372778-027 on UCSC Golden Path with GeneCards custom track
AB372778-027 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372778-027 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372778-027 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372778-027 Gene

Proteins for AB372778-027 Gene

Post-translational modifications for AB372778-027 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372778-027 Gene

Domains & Families for AB372778-027 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372778-027 Gene

Function for AB372778-027 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372778-027 Gene

Localization for AB372778-027 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372778-027 Gene

Pathways & Interactions for AB372778-027 Gene

PathCards logo

SuperPathways for AB372778-027 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372778-027 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372778-027 Gene

Drugs & Compounds for AB372778-027 Gene

No Compound Related Data Available

Transcripts for AB372778-027 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372778-027 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000169307_9606 miRNA 18 1

ENA: AB372778.1:1..18:ncRNA,

AB372778-027 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372778-027 Gene

No ASD Table

Relevant External Links for AB372778-027 Gene

GeneLoc Exon Structure for
AB372778-027

No data available for mRNA/cDNA for AB372778-027 Gene

Expression for AB372778-027 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372778-027 Gene

Orthologs for AB372778-027 Gene

No data available for Orthologs and Evolution for AB372778-027 Gene

Paralogs for AB372778-027 Gene

No data available for Paralogs for AB372778-027 Gene

Variants for AB372778-027 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372778-027 Gene

Disorders for AB372778-027 Gene

No disorders were found for AB372778-027 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372778-027 Gene

Publications for AB372778-027 Gene

No publications were found for AB372778-027 Gene.

No data available for Mastermind for AB372778-027 Gene

Products for AB372778-027 Gene

Sources for AB372778-027 Gene