Aliases for AB372778-022 Gene

Subcategory (RNA class) for AB372778-022 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372778-022 Gene

No Aliases found

No data available for External Ids for AB372778-022 Gene

Summaries for AB372778-022 Gene

GeneCards Summary for AB372778-022 Gene

AB372778-022 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372778-022 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372778-022 Gene

Genomics for AB372778-022 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372778-022 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J072279 Enhancer 0.8 Ensembl dbSUPER 600.7 +0.8 767 1.2 ZNF512 IKZF1 FOXA1 PRDM1 ZNF24 ZNF148 NONO GATAD2B WT1 ZFHX2 AB372778-022 RF01061-115 LOC105377158 LINC00877 RYBP PROK2
GH03J072280 Enhancer 0.6 Ensembl 600.7 -0.4 -433 0.4 ETV6 EP300 NCOR1 MYNN MNT ZNF592 TAL1 TCF12 ZEB2 TEAD4 AB372778-022 LOC105377158 LINC00877 RYBP PROK2
GH03J072281 Enhancer 0.3 Ensembl 600.7 -1.0 -1033 0.4 ARID1B AB372778-022 LOC105377158 LINC00877 RYBP PROK2
GH03J072288 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -8.7 -8723 2.1 LEF1 IKZF1 ZNF692 JUND MTA2 MTA1 DPF2 HDAC1 ETV6 SOX6 AB372778-022 LOC105377158 LINC00877 RYBP PROK2
GH03J072273 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 +6.1 6055 2.7 TEAD4 PRDM10 REST ZIC2 NR2C1 IKZF2 SP1 HDAC1 CEBPA SCRT2 SHQ1 RYBP EBLN2 AB372778-022 RF01061-115 LOC105377158 LINC00877 PROK2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372778-022 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372778-022 Gene

Genomic Locations for AB372778-022 Gene
chr3:72,280,551-72,280,568
(GRCh38/hg38)
Size:
18 bases
Orientation:
Minus strand

Genomic View for AB372778-022 Gene

Genes around AB372778-022 on UCSC Golden Path with GeneCards custom track
AB372778-022 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372778-022 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372778-022 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372778-022 Gene

Proteins for AB372778-022 Gene

Post-translational modifications for AB372778-022 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372778-022 Gene

Domains & Families for AB372778-022 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372778-022 Gene

Function for AB372778-022 Gene

Phenotypes From GWAS Catalog for AB372778-022 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372778-022 Gene

Localization for AB372778-022 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372778-022 Gene

Pathways & Interactions for AB372778-022 Gene

PathCards logo

SuperPathways for AB372778-022 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372778-022 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372778-022 Gene

Drugs & Compounds for AB372778-022 Gene

No Compound Related Data Available

Transcripts for AB372778-022 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372778-022 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000169307_9606 miRNA 18 1

ENA: AB372778.1:1..18:ncRNA,

AB372778-022 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372778-022 Gene

No ASD Table

Relevant External Links for AB372778-022 Gene

GeneLoc Exon Structure for
AB372778-022

No data available for mRNA/cDNA for AB372778-022 Gene

Expression for AB372778-022 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372778-022 Gene

Orthologs for AB372778-022 Gene

No data available for Orthologs and Evolution for AB372778-022 Gene

Paralogs for AB372778-022 Gene

No data available for Paralogs for AB372778-022 Gene

Variants for AB372778-022 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372778-022 Gene

Disorders for AB372778-022 Gene

No disorders were found for AB372778-022 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372778-022 Gene

Publications for AB372778-022 Gene

No publications were found for AB372778-022 Gene.

No data available for Mastermind for AB372778-022 Gene

Products for AB372778-022 Gene

Sources for AB372778-022 Gene