Aliases for AB372778-014 Gene

Subcategory (RNA class) for AB372778-014 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372778-014 Gene

No Aliases found

No data available for External Ids for AB372778-014 Gene

Summaries for AB372778-014 Gene

GeneCards Summary for AB372778-014 Gene

AB372778-014 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372778-014 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372778-014 Gene

Genomics for AB372778-014 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372778-014 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J036814 Enhancer 0.8 Ensembl ENCODE 0.7 +2.0 2008 1.3 PRDM10 RFX1 IKZF1 ZIC2 ZBTB44 ZNF10 OSR2 ZNF423 NCOR1 ARNT TPGS2 AB372778-014 KIAA1328 lnc-TPGS2-3 FHOD3
GH18J036813 Enhancer 0.6 Ensembl 0.7 +3.6 3561 1.2 TCF12 ZNF184 ZBTB2 ZSCAN29 NCOR1 TAL1 DPF2 HDAC2 MTA2 RAD51 ENSG00000267707 TPGS2 AB372778-014 KIAA1328 lnc-TPGS2-3 FHOD3
GH18J036808 Enhancer 0.8 Ensembl ENCODE 0.4 +8.3 8261 1.8 CTCF PKNOX1 REST RAD21 TRIM22 YY1 MNT SMC3 ZNF654 CREM ENSG00000267707 TPGS2 AB372778-014 lnc-TPGS2-3 KIAA1328 FHOD3
GH18J036812 Enhancer 0.4 FANTOM5 Ensembl 0.7 +4.8 4756 0.4 TPGS2 AB372778-014 lnc-TPGS2-3 KIAA1328 FHOD3
GH18J036799 Enhancer 0.3 ENCODE 0.4 +18.3 18290 0.4 EZH2 TCF12 lnc-TPGS2-3 TPGS2 AB372778-014 KIAA1328 FHOD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372778-014 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372778-014 Gene

Genomic Locations for AB372778-014 Gene
chr18:36,817,545-36,817,562
(GRCh38/hg38)
Size:
18 bases
Orientation:
Minus strand

Genomic View for AB372778-014 Gene

Genes around AB372778-014 on UCSC Golden Path with GeneCards custom track
AB372778-014 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372778-014 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372778-014 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372778-014 Gene

Proteins for AB372778-014 Gene

Post-translational modifications for AB372778-014 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372778-014 Gene

Domains & Families for AB372778-014 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372778-014 Gene

Function for AB372778-014 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372778-014 Gene

Localization for AB372778-014 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372778-014 Gene

Pathways & Interactions for AB372778-014 Gene

PathCards logo

SuperPathways for AB372778-014 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372778-014 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372778-014 Gene

Drugs & Compounds for AB372778-014 Gene

No Compound Related Data Available

Transcripts for AB372778-014 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372778-014 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000169307_9606 miRNA 18 1

ENA: AB372778.1:1..18:ncRNA,

AB372778-014 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372778-014 Gene

No ASD Table

Relevant External Links for AB372778-014 Gene

GeneLoc Exon Structure for
AB372778-014

No data available for mRNA/cDNA for AB372778-014 Gene

Expression for AB372778-014 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372778-014 Gene

Orthologs for AB372778-014 Gene

No data available for Orthologs and Evolution for AB372778-014 Gene

Paralogs for AB372778-014 Gene

No data available for Paralogs for AB372778-014 Gene

Variants for AB372778-014 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372778-014 Gene

Disorders for AB372778-014 Gene

No disorders were found for AB372778-014 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372778-014 Gene

Publications for AB372778-014 Gene

No publications were found for AB372778-014 Gene.

No data available for Mastermind for AB372778-014 Gene

Products for AB372778-014 Gene

Sources for AB372778-014 Gene