Aliases for AB372680 Gene

Subcategory (RNA class) for AB372680 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372680 Gene

No Aliases found

No data available for External Ids for AB372680 Gene

Summaries for AB372680 Gene

GeneCards Summary for AB372680 Gene

AB372680 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372680 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372680 Gene

Genomics for AB372680 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372680 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J117591 Enhancer 0.5 ENCODE 600.7 +0.2 158 0.2 ZNF629 PRDM1 HIC1 FEZF1 TRIM28 AB372680 DCBLD1 ENSG00000226181 NUS1 GOPC ENSG00000282218 lnc-ROS1-3
GH06J117592 Enhancer 0.5 Ensembl 600.7 -0.3 -270 0.4 ZNF629 PRDM1 HIC1 TRIM28 ZNF680 AB372680 DCBLD1 ENSG00000226181 NUS1 GOPC ENSG00000282218
GH06J117599 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -9.7 -9683 5.6 HNRNPL CREB1 GATAD2A PRDM10 ZNF629 REST TFE3 NFKBIZ POLR2A ZNF692 GOPC NEPNP lnc-DCBLD1-3 DCBLD1 SLC35F1 ENSG00000226181 NUS1 ZUP1 ROS1 AB372680
GH06J117593 Enhancer 0.8 Ensembl 0.7 -2.8 -2770 3.8 IKZF1 MTA2 PKNOX1 DPF2 HDAC1 SOX6 TCF12 EP300 CBX3 HMBOX1 GOPC DCBLD1 ENSG00000226181 NUS1 AB372680 ENSG00000282218
GH06J117584 Enhancer 0.4 Ensembl 0.4 +5.4 5430 4.2 FOXA1 SCRT2 GATA3 GOPC DCBLD1 ENSG00000226181 ROS1 AB372680 lnc-ROS1-3 ENSG00000282218
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372680 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372680 Gene

Genomic Locations for AB372680 Gene
chr6:117,591,716-117,591,731
(GRCh38/hg38)
Size:
16 bases
Orientation:
Minus strand

Genomic View for AB372680 Gene

Genes around AB372680 on UCSC Golden Path with GeneCards custom track
AB372680 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372680 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372680 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372680 Gene

Proteins for AB372680 Gene

Post-translational modifications for AB372680 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372680 Gene

Domains & Families for AB372680 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372680 Gene

Function for AB372680 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372680 Gene

Localization for AB372680 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372680 Gene

Pathways & Interactions for AB372680 Gene

PathCards logo

SuperPathways for AB372680 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372680 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372680 Gene

Drugs & Compounds for AB372680 Gene

No Compound Related Data Available

Transcripts for AB372680 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372680 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004EE0B5_9606 miRNA 16 1

ENA: AB372680.1:1..16:ncRNA,

AB372680 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372680 Gene

No ASD Table

Relevant External Links for AB372680 Gene

GeneLoc Exon Structure for
AB372680

No data available for mRNA/cDNA for AB372680 Gene

Expression for AB372680 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372680 Gene

Orthologs for AB372680 Gene

No data available for Orthologs and Evolution for AB372680 Gene

Paralogs for AB372680 Gene

No data available for Paralogs for AB372680 Gene

Variants for AB372680 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372680 Gene

Disorders for AB372680 Gene

No disorders were found for AB372680 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372680 Gene

Publications for AB372680 Gene

No publications were found for AB372680 Gene.

No data available for Mastermind for AB372680 Gene

Products for AB372680 Gene

Sources for AB372680 Gene