Aliases for AB372647 Gene

Subcategory (RNA class) for AB372647 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372647 Gene

No Aliases found

No data available for External Ids for AB372647 Gene

Summaries for AB372647 Gene

GeneCards Summary for AB372647 Gene

AB372647 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372647 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372647 Gene

Genomics for AB372647 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372647 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J045919 Enhancer 0.8 Ensembl ENCODE 600.7 +2.0 1959 4.2 FOXA1 ETS1 SP1 ZNF10 BRCA1 CEBPB FOS FOXA2 JUN RCOR1 AB372647 ENSG00000259433 piR-38351-168 LOC105370802 ENSG00000259200 SQOR
GH15J045947 Enhancer 0.5 Ensembl ENCODE 0.3 +30.7 30678 1.4 NANOG POU5F1 piR-38351-168 AB372647 SQOR
GH15J045903 Enhancer 0.3 Ensembl 0.4 -14.1 -14149 1.2 JUN AB372647 piR-33422-152 ENSG00000259200 LOC105370802 SQOR
GH15J045949 Enhancer 0.3 Ensembl 0.3 +32.2 32151 0.6 FOXA1 piR-38351-168 DUOX2 AB372647 SQOR
GH15J045906 Enhancer 0.2 Ensembl 0.4 -11.3 -11349 0.8 AB372647 piR-33422-152 ENSG00000259200 LOC105370802 SQOR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372647 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372647 Gene

Genomic Locations for AB372647 Gene
chr15:45,917,750-45,917,769
(GRCh38/hg38)
Size:
20 bases
Orientation:
Plus strand

Genomic View for AB372647 Gene

Genes around AB372647 on UCSC Golden Path with GeneCards custom track
AB372647 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372647 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372647 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372647 Gene

Proteins for AB372647 Gene

Post-translational modifications for AB372647 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372647 Gene

Domains & Families for AB372647 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372647 Gene

Function for AB372647 Gene

Phenotypes From GWAS Catalog for AB372647 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372647 Gene

Localization for AB372647 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372647 Gene

Pathways & Interactions for AB372647 Gene

PathCards logo

SuperPathways for AB372647 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372647 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372647 Gene

Drugs & Compounds for AB372647 Gene

No Compound Related Data Available

Transcripts for AB372647 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372647 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000042B251_9606 miRNA 20 1

ENA: AB372647.1:1..20:ncRNA,

AB372647 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372647 Gene

No ASD Table

Relevant External Links for AB372647 Gene

GeneLoc Exon Structure for
AB372647

No data available for mRNA/cDNA for AB372647 Gene

Expression for AB372647 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372647 Gene

Orthologs for AB372647 Gene

No data available for Orthologs and Evolution for AB372647 Gene

Paralogs for AB372647 Gene

No data available for Paralogs for AB372647 Gene

Variants for AB372647 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372647 Gene

Disorders for AB372647 Gene

No disorders were found for AB372647 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372647 Gene

Publications for AB372647 Gene

No publications were found for AB372647 Gene.

No data available for Mastermind for AB372647 Gene

Products for AB372647 Gene

Sources for AB372647 Gene