Aliases for AB372643-008 Gene

Subcategory (RNA class) for AB372643-008 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372643-008 Gene

No Aliases found

No data available for External Ids for AB372643-008 Gene

Summaries for AB372643-008 Gene

GeneCards Summary for AB372643-008 Gene

AB372643-008 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372643-008 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372643-008 Gene

Genomics for AB372643-008 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372643-008 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J007656 Enhancer 0.9 FANTOM5 ENCODE 600.7 +1.8 1844 2.5 SP1 RFX1 FOS PKNOX1 POLR2A CEBPA SCRT2 SP2 RUNX3 NR2C2 AB372643-008 XAB2 PCP2 STXBP2 MCEMP1 MCOLN1 PEX11G RPS27AP19 lnc-RETN-1 RETN
GH19J007655 Enhancer 0.7 FANTOM5 ENCODE 600.7 -0.4 -447 0.6 SPI1 ATF3 POLR2A HLF AB372643-008 MCEMP1 STXBP2 MCOLN1 PEX11G XAB2 PNPLA6 RETN L13712-012 PCP2
GH19J007654 Enhancer 0.3 ENCODE 600.7 -1.6 -1591 0.2 REST MEIS2 AB372643-008 L13712-012 RETN PCP2
GH19J007651 Enhancer 1.2 ENCODE CraniofacialAtlas 0.7 -3.6 -3570 1.8 CEBPG GATAD2A CTCF ATF7 TEAD4 PRDM10 REST ZNF629 TFE3 LEF1 L13712-012 XAB2 RETN AB372643-008 PCP2
GH19J007660 Enhancer 0.4 Ensembl 0.4 +5.5 5540 2.6 ZNF623 ZNF664 SPI1 ZNF121 XAB2 RPS27AP19 lnc-RETN-1 AB372643-008 RETN PCP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372643-008 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372643-008 Gene

Genomic Locations for AB372643-008 Gene
chr19:7,656,161-7,656,176
(GRCh38/hg38)
Size:
16 bases
Orientation:
Plus strand

Genomic View for AB372643-008 Gene

Genes around AB372643-008 on UCSC Golden Path with GeneCards custom track
AB372643-008 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372643-008 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372643-008 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372643-008 Gene

Proteins for AB372643-008 Gene

Post-translational modifications for AB372643-008 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372643-008 Gene

Domains & Families for AB372643-008 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372643-008 Gene

Function for AB372643-008 Gene

Phenotypes From GWAS Catalog for AB372643-008 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372643-008 Gene

Localization for AB372643-008 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372643-008 Gene

Pathways & Interactions for AB372643-008 Gene

PathCards logo

SuperPathways for AB372643-008 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372643-008 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372643-008 Gene

Drugs & Compounds for AB372643-008 Gene

No Compound Related Data Available

Transcripts for AB372643-008 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372643-008 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000046F011_9606 miRNA 16 1

ENA: AB372643.1:1..16:ncRNA,

AB372643-008 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372643-008 Gene

No ASD Table

Relevant External Links for AB372643-008 Gene

GeneLoc Exon Structure for
AB372643-008

No data available for mRNA/cDNA for AB372643-008 Gene

Expression for AB372643-008 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372643-008 Gene

Orthologs for AB372643-008 Gene

No data available for Orthologs and Evolution for AB372643-008 Gene

Paralogs for AB372643-008 Gene

No data available for Paralogs for AB372643-008 Gene

Variants for AB372643-008 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372643-008 Gene

Disorders for AB372643-008 Gene

No disorders were found for AB372643-008 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372643-008 Gene

Publications for AB372643-008 Gene

No publications were found for AB372643-008 Gene.

No data available for Mastermind for AB372643-008 Gene

Products for AB372643-008 Gene

Sources for AB372643-008 Gene