Aliases for AB372643-005 Gene

Subcategory (RNA class) for AB372643-005 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372643-005 Gene

No Aliases found

No data available for External Ids for AB372643-005 Gene

Summaries for AB372643-005 Gene

GeneCards Summary for AB372643-005 Gene

AB372643-005 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372643-005 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372643-005 Gene

Genomics for AB372643-005 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372643-005 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J052962 Enhancer 0.3 dbSUPER 600.7 +1.7 1653 1.2 CTCF AB372643-005 KRT78 KRT79 KRT84 KRT87P KRT8 piR-61945-100 EIF4B
GH12J052964 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 0.7 +4.1 4058 1.7 TEAD4 EZH2 POLR2A NR2F2 WT1 ZNF687 ZBTB40 TAF1 TBP KRT78 KRT79 KRT84 KRT86 KRT71 KRT4 KRT87P PCBP2 AMHR2 KRT18
GH12J052968 Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +12.2 12242 9 CEBPG CREB1 GATAD2A CTCF ZBTB33 YBX1 PRDM10 IKZF1 NFKBIZ ZNF692 KRT18 SOAT2 EIF4B AAAS ZNF740 TARBP2 KRT79 KRT82 KRT71 ENSG00000257808
GH12J052957 Enhancer 0.8 Ensembl dbSUPER 0.7 -4.4 -4385 1.4 SOX6 NRF1 ZNF10 CTBP1 ESR1 TSHZ1 SPI1 ELF1 EBF1 ZFP64 KRT4 AB372643-005 KRT8 lnc-KRT8-1 EIF4B
GH12J052980 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +19.8 19800 1.4 CREB1 GATAD2A CTCF ZNF629 IKZF1 NFKBIZ ZNF692 RCOR2 TARDBP JUND ENSG00000270175 KRT18 MAP3K12 KRT71 KRT84 IGFBP6 SOAT2 piR-61945-100 AB372643-005 EIF4B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372643-005 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372643-005 Gene

Genomic Locations for AB372643-005 Gene
chr12:52,961,086-52,961,101
(GRCh38/hg38)
Size:
16 bases
Orientation:
Plus strand

Genomic View for AB372643-005 Gene

Genes around AB372643-005 on UCSC Golden Path with GeneCards custom track
AB372643-005 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372643-005 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372643-005 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372643-005 Gene

Proteins for AB372643-005 Gene

Post-translational modifications for AB372643-005 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372643-005 Gene

Domains & Families for AB372643-005 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372643-005 Gene

Function for AB372643-005 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372643-005 Gene

Localization for AB372643-005 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372643-005 Gene

Pathways & Interactions for AB372643-005 Gene

PathCards logo

SuperPathways for AB372643-005 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372643-005 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372643-005 Gene

Drugs & Compounds for AB372643-005 Gene

No Compound Related Data Available

Transcripts for AB372643-005 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372643-005 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000046F011_9606 miRNA 16 1

ENA: AB372643.1:1..16:ncRNA,

AB372643-005 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372643-005 Gene

No ASD Table

Relevant External Links for AB372643-005 Gene

GeneLoc Exon Structure for
AB372643-005

No data available for mRNA/cDNA for AB372643-005 Gene

Expression for AB372643-005 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372643-005 Gene

Orthologs for AB372643-005 Gene

No data available for Orthologs and Evolution for AB372643-005 Gene

Paralogs for AB372643-005 Gene

No data available for Paralogs for AB372643-005 Gene

Variants for AB372643-005 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372643-005 Gene

Disorders for AB372643-005 Gene

No disorders were found for AB372643-005 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372643-005 Gene

Publications for AB372643-005 Gene

No publications were found for AB372643-005 Gene.

No data available for Mastermind for AB372643-005 Gene

Products for AB372643-005 Gene

Sources for AB372643-005 Gene