Aliases for AB372642 Gene

Subcategory (RNA class) for AB372642 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372642 Gene

No Aliases found

No data available for External Ids for AB372642 Gene

Summaries for AB372642 Gene

GeneCards Summary for AB372642 Gene

AB372642 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372642 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372642 Gene

Genomics for AB372642 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372642 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J099417 Enhancer 0.6 UCNEbase 600.7 -0.5 -498 0.2 ZNF316 MAFG MAFK EMSY AB372642 piR-52294-052 CCNK SETD3 BCL11B
GH14J099411 Enhancer 0.9 Ensembl ENCODE 0.7 +4.1 4106 6.7 CREB1 CTCF TEAD4 PRDM1 ZIC2 RAD21 TRIM22 ZNF341 CEBPB SMARCA5 CCNK SETD3 AB372642 lnc-CCDC85C-4 BCL11B
GH14J099420 Enhancer 0.5 ENCODE 0.7 -4.2 -4237 0.7 PKNOX1 ZNF740 GABPA VEZF1 MEIS2 AB372642 piR-52294-052 CCNK SETD3 BCL11B
GH14J099424 Enhancer 0.7 Ensembl ENCODE 0.4 -9.4 -9417 4.2 CEBPB JUND USF1 BHLHE40 GLIS1 SMARCA4 ZNF24 SETD3 CCNK AB372642 piR-52294-052 BCL11B
GH14J099430 Enhancer 0.7 Ensembl ENCODE 0.4 -14.0 -14010 0.6 CTCF ZNF444 USF1 ELF1 ZNF143 MNT USF2 TRIM22 CCNK SETD3 piR-52294-052 AB372642 BCL11B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372642 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372642 Gene

Genomic Locations for AB372642 Gene
chr14:99,416,866-99,416,882
(GRCh38/hg38)
Size:
17 bases
Orientation:
Minus strand

Genomic View for AB372642 Gene

Genes around AB372642 on UCSC Golden Path with GeneCards custom track
AB372642 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372642 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372642 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372642 Gene

Proteins for AB372642 Gene

Post-translational modifications for AB372642 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372642 Gene

Domains & Families for AB372642 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372642 Gene

Function for AB372642 Gene

Phenotypes From GWAS Catalog for AB372642 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372642 Gene

Localization for AB372642 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372642 Gene

Pathways & Interactions for AB372642 Gene

PathCards logo

SuperPathways for AB372642 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372642 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372642 Gene

Drugs & Compounds for AB372642 Gene

No Compound Related Data Available

Transcripts for AB372642 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372642 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003B45C2_9606 miRNA 17 1

ENA: AB372642.1:1..17:ncRNA,

AB372642 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372642 Gene

No ASD Table

Relevant External Links for AB372642 Gene

GeneLoc Exon Structure for
AB372642

No data available for mRNA/cDNA for AB372642 Gene

Expression for AB372642 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372642 Gene

Orthologs for AB372642 Gene

No data available for Orthologs and Evolution for AB372642 Gene

Paralogs for AB372642 Gene

No data available for Paralogs for AB372642 Gene

Variants for AB372642 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372642 Gene

Disorders for AB372642 Gene

No disorders were found for AB372642 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372642 Gene

Publications for AB372642 Gene

No publications were found for AB372642 Gene.

No data available for Mastermind for AB372642 Gene

Products for AB372642 Gene

Sources for AB372642 Gene