Aliases for AB372640 Gene

Subcategory (RNA class) for AB372640 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372640 Gene

No Aliases found

No data available for External Ids for AB372640 Gene

Summaries for AB372640 Gene

GeneCards Summary for AB372640 Gene

AB372640 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372640 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372640 Gene

Genomics for AB372640 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372640 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J127713 Enhancer 0.8 Ensembl CraniofacialAtlas dbSUPER 600.7 -0.6 -619 3.4 ZNF692 ZNF341 NFIC SPI1 ZFP69B REST NFIB AB372640 TPRA1 lnc-MGLL-1 ABTB1 KBTBD12 MGLL
GH03J127733 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +20.5 20523 4 LARP7 RELA TCF12 IKZF2 POLR2A YY1 PKNOX1 EED DPF2 RELB MGLL TPRA1 lnc-ABTB1-4 AB372640 ABTB1 KBTBD12
GH03J127729 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.7 14680 1.4 BACH1 ZNF24 CEBPB NFE2 ZNF316 MEF2D MAFG CEBPG MAFK ZFP91 TPRA1 MGLL AB372640 lnc-ABTB1-4 ABTB1 KBTBD12
GH03J127717 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 +2.5 2481 2.4 EED RUNX3 CREB1 POLR2A CTCF SMARCA4 PODXL2 TPRA1 AB372640 lnc-ABTB1-4 ABTB1 KBTBD12 MGLL
GH03J127744 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +33.2 33238 7.6 SP1 CTCF PRDM10 LARP7 RFX1 RELA RAD21 TCF12 IKZF2 RCOR1 TPRA1 MGLL LOC107986127 lnc-ABTB1-4 lnc-TPRA1-3 AB372640 ABTB1 KBTBD12
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372640 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372640 Gene

Genomic Locations for AB372640 Gene
chr3:127,715,120-127,715,136
(GRCh38/hg38)
Size:
17 bases
Orientation:
Plus strand

Genomic View for AB372640 Gene

Genes around AB372640 on UCSC Golden Path with GeneCards custom track
AB372640 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372640 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372640 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372640 Gene

Proteins for AB372640 Gene

Post-translational modifications for AB372640 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372640 Gene

Domains & Families for AB372640 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372640 Gene

Function for AB372640 Gene

Phenotypes From GWAS Catalog for AB372640 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372640 Gene

Localization for AB372640 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372640 Gene

Pathways & Interactions for AB372640 Gene

PathCards logo

SuperPathways for AB372640 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372640 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372640 Gene

Drugs & Compounds for AB372640 Gene

No Compound Related Data Available

Transcripts for AB372640 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372640 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004EE189_9606 miRNA 17 1

ENA: AB372640.1:1..17:ncRNA,

AB372640 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372640 Gene

No ASD Table

Relevant External Links for AB372640 Gene

GeneLoc Exon Structure for
AB372640

No data available for mRNA/cDNA for AB372640 Gene

Expression for AB372640 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372640 Gene

Orthologs for AB372640 Gene

No data available for Orthologs and Evolution for AB372640 Gene

Paralogs for AB372640 Gene

No data available for Paralogs for AB372640 Gene

Variants for AB372640 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372640 Gene

Disorders for AB372640 Gene

No disorders were found for AB372640 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372640 Gene

Publications for AB372640 Gene

No publications were found for AB372640 Gene.

No data available for Mastermind for AB372640 Gene

Products for AB372640 Gene

Sources for AB372640 Gene