Aliases for AB372628 Gene

Subcategory (RNA class) for AB372628 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372628 Gene

No Aliases found

No data available for External Ids for AB372628 Gene

Summaries for AB372628 Gene

GeneCards Summary for AB372628 Gene

AB372628 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372628 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372628 Gene

Genomics for AB372628 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372628 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J111175 Promoter/Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 -4.4 -4415 5.4 PKNOX1 RUNX3 ZNF316 MAFF TCF12 MAFK ARNT NR2F2 POLR2A SPI1 ARHGEF7 ARHGEF7-AS2 AB372628 lnc-TEX29-9 TEX29
GH13J111164 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.8 -15795 4.7 PKNOX1 RUNX3 POLR2A SMARCA4 BHLHE40 SPI1 IKZF1 ARHGEF7 ARHGEF7-AS2 CARS2 ING1 ANKRD10 lnc-TEX29-9 AB372628 TEX29
GH13J111171 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -11.1 -11148 2.3 TBP ARID4B NR2F6 ZNF558 HSF1 SP5 ARHGEF7 ARHGEF7-AS2 AB372628 lnc-TEX29-9 TEX29
GH13J111161 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -19.6 -19579 2.6 ATF7 IKZF2 DPF2 ATF2 IKZF1 TBX21 NFATC1 SPI1 ARHGEF7 ARHGEF7-AS2 lnc-TEX29-9 AB372628 TEX29
GH13J111162 Enhancer 0.4 Ensembl dbSUPER 0.4 -21.2 -21178 0.2 NFATC1 ARHGEF7-AS2 ARHGEF7 lnc-TEX29-9 AB372628 TEX29
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372628 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372628 Gene

Genomic Locations for AB372628 Gene
chr13:111,182,479-111,182,500
(GRCh38/hg38)
Size:
22 bases
Orientation:
Plus strand

Genomic View for AB372628 Gene

Genes around AB372628 on UCSC Golden Path with GeneCards custom track
AB372628 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372628 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372628 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372628 Gene

Proteins for AB372628 Gene

Post-translational modifications for AB372628 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372628 Gene

Domains & Families for AB372628 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372628 Gene

Function for AB372628 Gene

Phenotypes From GWAS Catalog for AB372628 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372628 Gene

Localization for AB372628 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372628 Gene

Pathways & Interactions for AB372628 Gene

PathCards logo

SuperPathways for AB372628 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372628 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372628 Gene

Drugs & Compounds for AB372628 Gene

No Compound Related Data Available

Transcripts for AB372628 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372628 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000448074_9606 miRNA 22 1

ENA: AB372628.1:1..22:ncRNA,

AB372628 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372628 Gene

No ASD Table

Relevant External Links for AB372628 Gene

GeneLoc Exon Structure for
AB372628

No data available for mRNA/cDNA for AB372628 Gene

Expression for AB372628 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372628 Gene

Orthologs for AB372628 Gene

No data available for Orthologs and Evolution for AB372628 Gene

Paralogs for AB372628 Gene

No data available for Paralogs for AB372628 Gene

Variants for AB372628 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372628 Gene

Disorders for AB372628 Gene

No disorders were found for AB372628 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372628 Gene

Publications for AB372628 Gene

No publications were found for AB372628 Gene.

No data available for Mastermind for AB372628 Gene

Products for AB372628 Gene

Sources for AB372628 Gene