Aliases for AB372578 Gene

Subcategory (RNA class) for AB372578 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for AB372578 Gene

No Aliases found

No data available for External Ids for AB372578 Gene

Summaries for AB372578 Gene

GeneCards Summary for AB372578 Gene

AB372578 is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for AB372578 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AB372578 Gene

Genomics for AB372578 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for AB372578 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J134783 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +0.4 430 2.2 CEBPG MNT CEBPB OSR2 TCF12 IKZF1 POLR2A FEZF1 SMARCA4 KLF1 AB372578 ENSG00000286502 FCN2 COL5A1
GH09J134774 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.3 9288 2.7 CEBPG ZBTB33 ZHX2 FOXA1 POLR2A SCRT2 CEBPB CTBP1 OSR2 RCOR1 ENSG00000286502 COL5A1 OLFM1 AB372578 FCN2
GH09J134778 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +5.8 5836 0.9 CREB1 CTCF TEAD4 PRDM10 ZIC2 ZNF600 CTBP1 CEBPB ZNF444 CHD2 ENSG00000286502 AB372578 FCN2 COL5A1
GH09J134805 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -24.4 -24437 8.1 TEAD4 ZNF629 FOXA1 PRDM1 ZIC2 ZNF600 ZNF341 MNT CTCF ZBTB20 BRD3 FCN2 FCN1 WDR5 PPP1R26-AS1 COL5A1 RXRA AB372578 MIR3689C
GH09J134800 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -16.0 -16039 0.7 POLR2A ZNF687 SMARCA4 FCN2 FCN1 PPP1R26-AS1 COL5A1 AB372578 MIR3689C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AB372578 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for AB372578 Gene

Genomic Locations for AB372578 Gene
chr9:134,785,116-134,785,131
(GRCh38/hg38)
Size:
16 bases
Orientation:
Minus strand

Genomic View for AB372578 Gene

Genes around AB372578 on UCSC Golden Path with GeneCards custom track
AB372578 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

AB372578 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AB372578 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for AB372578 Gene

Proteins for AB372578 Gene

Post-translational modifications for AB372578 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AB372578 Gene

Domains & Families for AB372578 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AB372578 Gene

Function for AB372578 Gene

Phenotypes From GWAS Catalog for AB372578 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AB372578 Gene

Localization for AB372578 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AB372578 Gene

Pathways & Interactions for AB372578 Gene

PathCards logo

SuperPathways for AB372578 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AB372578 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AB372578 Gene

Drugs & Compounds for AB372578 Gene

No Compound Related Data Available

Transcripts for AB372578 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for AB372578 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002CD9F0_9606 miRNA 16 1

ENA: AB372578.1:1..16:ncRNA,

AB372578 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for AB372578 Gene

No ASD Table

Relevant External Links for AB372578 Gene

GeneLoc Exon Structure for
AB372578

No data available for mRNA/cDNA for AB372578 Gene

Expression for AB372578 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AB372578 Gene

Orthologs for AB372578 Gene

No data available for Orthologs and Evolution for AB372578 Gene

Paralogs for AB372578 Gene

No data available for Paralogs for AB372578 Gene

Variants for AB372578 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for AB372578 Gene

Disorders for AB372578 Gene

No disorders were found for AB372578 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AB372578 Gene

Publications for AB372578 Gene

No publications were found for AB372578 Gene.

No data available for Mastermind for AB372578 Gene

Products for AB372578 Gene

Sources for AB372578 Gene