Aliases for AACSP1 Gene

Aliases for AACSP1 Gene

  • Acetoacetyl-CoA Synthetase Pseudogene 1 2 3 5
  • Acetoacetyl-CoA Synthetase-Like 2
  • AACSL 3

External Ids for AACSP1 Gene

Previous HGNC Symbols for AACSP1 Gene

  • AACSL

Previous GeneCards Identifiers for AACSP1 Gene

  • GC05M178192

Summaries for AACSP1 Gene

GeneCards Summary for AACSP1 Gene

AACSP1 (Acetoacetyl-CoA Synthetase Pseudogene 1) is a Pseudogene.

Additional gene information for AACSP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for AACSP1 Gene

Genomics for AACSP1 Gene

GeneHancer (GH) Regulatory Elements for AACSP1 Gene

Promoters and enhancers for AACSP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J178832 Promoter/Enhancer 1.1 EPDnew FANTOM5 13.7 -14.5 -14519 0.5 MYC POLR2G TBP E2F6 MNT EP400 ZBTB33 FOS SAP30 NFATC3 RF00017-5161 piR-31271 ZNF354B AACSP1 ZNF879 lnc-ZFP2-1
GH05J178839 Enhancer 0.7 ENCODE 14.2 -21.0 -21040 0.2 ZNF217 CTCF REST CUX1 RAD21 TRIM22 GATAD2B SMC3 CTBP1 HCFC1 LOC100129457 lnc-ZNF354B-2 piR-55035-001 piR-61675-001 AACSP1 ZNF354B GRM6 CLK4 COL23A1 lnc-ZFP2-1
GH05J178785 Enhancer 0.9 Ensembl ENCODE 10.1 +31.5 31535 2.6 ZNF217 TCF12 TRIM28 RFX1 CTBP1 SIN3A ESRRA CTCF ZNF316 FOXA2 RNU1-39P AACSP1 piR-49334 piR-37063 lnc-ZFP2-1
GH05J178826 Enhancer 0.5 Ensembl ENCODE 11.9 -7.6 -7610 0.9 FOS MYC ENSG00000274813 piR-40334 piR-44849 AACSP1 lnc-ZFP2-1
GH05J178777 Enhancer 1.1 FANTOM5 Ensembl ENCODE 5.4 +40.1 40134 5.4 NCOR1 ZIC2 TCF7 SKI FOXA2 USF1 SPI1 FOXP1 SMAD4 BCL6 ZFP2 GRM6 AACSP1 LOC101928445 piR-37063 piR-49334 lnc-ZFP2-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around AACSP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AACSP1 Gene

Genomic Locations for AACSP1 Gene
chr5:178,764,861-178,818,435
(GRCh38/hg38)
Size:
53,575 bases
Orientation:
Minus strand
chr5:178,191,862-178,245,436
(GRCh37/hg19)
Size:
53,575 bases
Orientation:
Minus strand

Genomic View for AACSP1 Gene

Genes around AACSP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AACSP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AACSP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AACSP1 Gene

Proteins for AACSP1 Gene

Post-translational modifications for AACSP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AACSP1 Gene

Domains & Families for AACSP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for AACSP1 Gene

Function for AACSP1 Gene

Phenotypes From GWAS Catalog for AACSP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AACSP1 Gene

Localization for AACSP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AACSP1 Gene

Pathways & Interactions for AACSP1 Gene

PathCards logo

SuperPathways for AACSP1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for AACSP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for AACSP1 Gene

Drugs & Compounds for AACSP1 Gene

No Compound Related Data Available

Transcripts for AACSP1 Gene

mRNA/cDNA for AACSP1 Gene

5 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for AACSP1 Gene

No ASD Table

Relevant External Links for AACSP1 Gene

GeneLoc Exon Structure for
AACSP1

Expression for AACSP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for AACSP1 Gene

mRNA differential expression in normal tissues according to GTEx for AACSP1 Gene

This gene is overexpressed in Testis (x27.0), Skin - Sun Exposed (Lower leg) (x6.8), and Skin - Not Sun Exposed (Suprapubic) (x4.1).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for AACSP1

SOURCE GeneReport for Unigene cluster for AACSP1 Gene:

Hs.382790
genes like me logo Genes that share expression patterns with AACSP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AACSP1 Gene

Orthologs for AACSP1 Gene

Evolution for AACSP1 Gene

ENSEMBL:
Gene Tree for AACSP1 (if available)
TreeFam:
Gene Tree for AACSP1 (if available)

No data available for Orthologs for AACSP1 Gene

Paralogs for AACSP1 Gene

No data available for Paralogs for AACSP1 Gene

Variants for AACSP1 Gene

Structural Variations from Database of Genomic Variants (DGV) for AACSP1 Gene

Variant ID Type Subtype PubMed ID
esv3890769 CNV gain 25118596
nsv1120062 OTHER inversion 24896259
nsv509108 CNV insertion 20534489
nsv600452 CNV gain 21841781

Additional Variant Information for AACSP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AACSP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for AACSP1 Gene

Disorders for AACSP1 Gene

Additional Disease Information for AACSP1

No disorders were found for AACSP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AACSP1 Gene

Publications for AACSP1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for AACSP1 Gene

Sources for AACSP1 Gene