5MWI_A-115 Gene (RNA Gene)

 

GC03P171525
GIFtS:
1
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Aliases for 5MWI_A-115 Gene

Subcategory (RNA class) for 5MWI_A-115 Gene

misc_RNA

Number of RNA Genes sources:

1 / 17

Aliases for 5MWI_A-115 Gene

  • 5MWI_A 167

Previous GeneCards Identifiers for 5MWI_A-115 Gene

  • GC22P027798

No data available for External Ids for 5MWI_A-115 Gene

Summaries for 5MWI_A-115 Gene

GeneCards Summary for 5MWI_A-115 Gene

5MWI_A-115 is an RNA Gene, and is affiliated with the misc_RNA class.

Additional gene information for 5MWI_A-115 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for 5MWI_A-115 Gene

Genomics for 5MWI_A-115 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for 5MWI_A-115 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH03J171523 Enhancer 1.1 Ensembl ENCODE 600.7 -0.4 -389 3.8 RFX1 LEF1 IKZF1 JUND DDX20 MTA2 BRD9 ZNF24 DPF2 HDAC1 5MWI_A-115 RF00026-750 RNU6-348P TNIK PLD1
GH03J171526 Enhancer 0.8 Ensembl ENCODE 0.7 +2.7 2711 1.2 FOXA1 RXRB CEBPA CEBPB FOXA2 TEAD1 NR2F2 BCL6 RXRA THRB 5MWI_A-115 piR-31508-037 TNIK PLD1
GH03J171530 Enhancer 0.2 Ensembl 0.4 +6.0 6011 0.6 piR-31508-037 5MWI_A-115 TNIK PLD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around 5MWI_A-115 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for 5MWI_A-115 Gene

Genomic Locations for 5MWI_A-115 Gene
chr3:171,524,290-171,524,315
(GRCh38/hg38)
Size:
26 bases
Orientation:
Plus strand

Genomic View for 5MWI_A-115 Gene

Genes around 5MWI_A-115 on UCSC Golden Path with GeneCards custom track
5MWI_A-115 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

5MWI_A-115 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for 5MWI_A-115 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for 5MWI_A-115 Gene

Proteins for 5MWI_A-115 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for 5MWI_A-115 Gene

No Post-translational modifications

No data available for DME Specific Peptides for 5MWI_A-115 Gene

Domains & Families for 5MWI_A-115 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for 5MWI_A-115 Gene

Function for 5MWI_A-115 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for 5MWI_A-115 Gene

Localization for 5MWI_A-115 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for 5MWI_A-115 Gene

Pathways & Interactions for 5MWI_A-115 Gene

PathCards logo

SuperPathways for 5MWI_A-115 Gene

No Data Available

Gene Ontology (GO) - Biological Process for 5MWI_A-115 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for 5MWI_A-115 Gene

Drugs & Compounds for 5MWI_A-115 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for 5MWI_A-115 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for 5MWI_A-115 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000B21DD0_9606 misc_RNA 26 1

PDBe: 5MWI_A,

5MWI_A-115 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for 5MWI_A-115 Gene

No ASD Table

Relevant External Links for 5MWI_A-115 Gene

GeneLoc Exon Structure for
5MWI_A-115

No data available for mRNA/cDNA for 5MWI_A-115 Gene

Expression for 5MWI_A-115 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for 5MWI_A-115 Gene

Orthologs for 5MWI_A-115 Gene

No data available for Orthologs and Evolution for 5MWI_A-115 Gene

Paralogs for 5MWI_A-115 Gene

No data available for Paralogs for 5MWI_A-115 Gene

Variants for 5MWI_A-115 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for 5MWI_A-115 Gene

Disorders for 5MWI_A-115 Gene

No disorders were found for 5MWI_A-115 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for 5MWI_A-115 Gene

Publications for 5MWI_A-115 Gene

No publications were found for 5MWI_A-115 Gene.

No data available for Mastermind for 5MWI_A-115 Gene

Products for 5MWI_A-115 Gene

Sources for 5MWI_A-115 Gene