5MWI_A-042 Gene (RNA Gene)

 

GC12M132062
GIFtS:
3

Aliases for 5MWI_A-042 Gene

Subcategory (RNA class) for 5MWI_A-042 Gene

misc_RNA

Number of RNA Genes sources:

1 / 14

Aliases for 5MWI_A-042 Gene

  • 5MWI_A 171

No data available for External Ids for 5MWI_A-042 Gene

Summaries for 5MWI_A-042 Gene

GeneCards Summary for 5MWI_A-042 Gene

5MWI_A-042 is an RNA Gene, and is affiliated with the misc_RNA class.

Additional gene information for 5MWI_A-042 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for 5MWI_A-042 Gene

Genomics for 5MWI_A-042 Gene

GeneHancer (GH) Regulatory Elements for 5MWI_A-042 Gene

Promoters and enhancers for 5MWI_A-042 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J132065 Enhancer 0.9 Ensembl ENCODE 0.7 -3.8 -3835 2.4 EP300 ZIC2 POLR2G MEF2B POLR2A NBN SPI1 ELF1 MAFK IRF4 SNORA49 EP400P1 5MWI_A-042 ENSG00000257000 EP400
GH12J132069 Enhancer 0.9 Ensembl ENCODE 0.4 -9.5 -9501 4.2 EP300 POLR2A ARNT NBN SMARCA5 ZFHX2 IRF4 EBF1 IKZF1 RB1 DDX51 SNORA49 EP400P1 ENSG00000257000 5MWI_A-042 EP400
GH12J132064 Promoter 0.6 EPDnew 0.7 -2.3 -2293 0.1 POLR2G EBF1 CTCF EP400 SNORA49 5MWI_A-042 ENSG00000257000
GH12J132046 Enhancer 0.8 Ensembl ENCODE 0.4 +15.3 15349 2.7 JUND FOS MXI1 USF1 MAFK RCOR1 BHLHE40 GATA2 MAZ NFE2L2 EP400P1 ENSG00000257000 PUS1 5MWI_A-042 SNORA49 EP400
GH12J132077 Enhancer 0.6 Ensembl ENCODE 0.4 -16.3 -16263 2.5 FOS JUN BHLHE40 ENSG00000257000 EP400P1 5MWI_A-042 EP400
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around 5MWI_A-042 on UCSC Golden Path with GeneCards custom track

Genomic Locations for 5MWI_A-042 Gene

Genomic Locations for 5MWI_A-042 Gene
chr12:132,062,551-132,062,576
(GRCh38/hg38)
Size:
26 bases
Orientation:
Minus strand

Genomic View for 5MWI_A-042 Gene

Genes around 5MWI_A-042 on UCSC Golden Path with GeneCards custom track

5MWI_A-042 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for 5MWI_A-042 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for 5MWI_A-042 Gene

Proteins for 5MWI_A-042 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for 5MWI_A-042 Gene

No Post-translational modifications

No data available for DME Specific Peptides for 5MWI_A-042 Gene

Domains & Families for 5MWI_A-042 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for 5MWI_A-042 Gene

Function for 5MWI_A-042 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

miRNA for 5MWI_A-042 Gene

miRTarBase miRNAs that target 5MWI_A-042

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for 5MWI_A-042 Gene

Localization for 5MWI_A-042 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for 5MWI_A-042 Gene

Pathways & Interactions for 5MWI_A-042 Gene

PathCards logo

SuperPathways for 5MWI_A-042 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for 5MWI_A-042 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for 5MWI_A-042 Gene

Drugs & Compounds for 5MWI_A-042 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for 5MWI_A-042 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for 5MWI_A-042 Gene

1 RNACentral transcripts :
1 PDBe transcripts :
  • 5MWI_A

Alternative Splicing Database (ASD) splice patterns (SP) for 5MWI_A-042 Gene

No ASD Table

Relevant External Links for 5MWI_A-042 Gene

GeneLoc Exon Structure for
5MWI_A-042

Expression for 5MWI_A-042 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for 5MWI_A-042 Gene

Orthologs for 5MWI_A-042 Gene

No data available for Orthologs and Evolution for 5MWI_A-042 Gene

Paralogs for 5MWI_A-042 Gene

No data available for Paralogs for 5MWI_A-042 Gene

Variants for 5MWI_A-042 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for 5MWI_A-042 Gene

Disorders for 5MWI_A-042 Gene

No disorders were found for 5MWI_A-042 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for 5MWI_A-042 Gene

Publications for 5MWI_A-042 Gene

No publications were found for 5MWI_A-042 Gene.

No data available for Mastermind for 5MWI_A-042 Gene

Products for 5MWI_A-042 Gene

Sources for 5MWI_A-042 Gene