Aliases for 5MWI_A-027 Gene

Subcategory (RNA class) for 5MWI_A-027 Gene

misc_RNA

Number of RNA Genes sources:

1 / 17

Aliases for 5MWI_A-027 Gene

  • 5MWI_A 167

Previous GeneCards Identifiers for 5MWI_A-027 Gene

  • GC11P096093

No data available for External Ids for 5MWI_A-027 Gene

Summaries for 5MWI_A-027 Gene

GeneCards Summary for 5MWI_A-027 Gene

5MWI_A-027 is an RNA Gene, and is affiliated with the misc_RNA class.

Additional gene information for 5MWI_A-027 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for 5MWI_A-027 Gene

Genomics for 5MWI_A-027 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for 5MWI_A-027 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J110427 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -0.5 -524 7.5 HNRNPL CTCF PRDM10 IKZF1 ZNF692 BACH1 ETV6 LARP7 ZNF143 PHF21A FDX1 5MWI_A-027 ENSG00000271390 lnc-RDX-5 LOC105369487 ARHGAP20
GH11J110436 Enhancer 0.7 ENCODE 0.4 -5.4 -5364 0.2 RNF2 PKNOX1 EP300 CBX3 NKRF EGR1 CEBPB FOXK2 GATAD2A MNT FDX1 5MWI_A-027 LOC105369487 ARHGAP20
GH11J110454 Enhancer 0.6 Ensembl 0.4 -23.1 -23073 2.4 RUNX3 BCLAF1 JUNB IRF4 BATF ZNF217 SPI1 IKZF1 ETV6 CREM FDX1 LINC02732 LOC105369487 5MWI_A-027 ARHGAP20
GH11J110447 Enhancer 0.3 FANTOM5 0.4 -16.2 -16222 0.4 SPI1 FDX1 LINC02732 5MWI_A-027 LOC105369487 ARHGAP20
GH11J110438 Enhancer 0.2 Ensembl 0.4 -7.5 -7472 0.4 FDX1 LINC02732 5MWI_A-027 LOC105369487 ARHGAP20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around 5MWI_A-027 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for 5MWI_A-027 Gene

Genomic Locations for 5MWI_A-027 Gene
chr11:110,431,103-110,431,128
(GRCh38/hg38)
Size:
26 bases
Orientation:
Minus strand

Genomic View for 5MWI_A-027 Gene

Genes around 5MWI_A-027 on UCSC Golden Path with GeneCards custom track
5MWI_A-027 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

5MWI_A-027 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for 5MWI_A-027 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for 5MWI_A-027 Gene

Proteins for 5MWI_A-027 Gene

Post-translational modifications for 5MWI_A-027 Gene

No Post-translational modifications

No data available for DME Specific Peptides for 5MWI_A-027 Gene

Domains & Families for 5MWI_A-027 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for 5MWI_A-027 Gene

Function for 5MWI_A-027 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for 5MWI_A-027 Gene

Localization for 5MWI_A-027 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for 5MWI_A-027 Gene

Pathways & Interactions for 5MWI_A-027 Gene

PathCards logo

SuperPathways for 5MWI_A-027 Gene

No Data Available

Gene Ontology (GO) - Biological Process for 5MWI_A-027 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for 5MWI_A-027 Gene

Drugs & Compounds for 5MWI_A-027 Gene

No Compound Related Data Available

Transcripts for 5MWI_A-027 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for 5MWI_A-027 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000B21DD0_9606 misc_RNA 26 1

PDBe: 5MWI_A,

5MWI_A-027 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for 5MWI_A-027 Gene

No ASD Table

Relevant External Links for 5MWI_A-027 Gene

GeneLoc Exon Structure for
5MWI_A-027

No data available for mRNA/cDNA for 5MWI_A-027 Gene

Expression for 5MWI_A-027 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for 5MWI_A-027 Gene

Orthologs for 5MWI_A-027 Gene

No data available for Orthologs and Evolution for 5MWI_A-027 Gene

Paralogs for 5MWI_A-027 Gene

No data available for Paralogs for 5MWI_A-027 Gene

Variants for 5MWI_A-027 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for 5MWI_A-027 Gene

Disorders for 5MWI_A-027 Gene

No disorders were found for 5MWI_A-027 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for 5MWI_A-027 Gene

Publications for 5MWI_A-027 Gene

No publications were found for 5MWI_A-027 Gene.

No data available for Mastermind for 5MWI_A-027 Gene

Products for 5MWI_A-027 Gene

Sources for 5MWI_A-027 Gene