Aliases for 5MWI_A-002 Gene

Subcategory (RNA class) for 5MWI_A-002 Gene

misc_RNA

Number of RNA Genes sources:

1 / 17

Aliases for 5MWI_A-002 Gene

  • 5MWI_A 167

No data available for External Ids for 5MWI_A-002 Gene

Summaries for 5MWI_A-002 Gene

GeneCards Summary for 5MWI_A-002 Gene

5MWI_A-002 is an RNA Gene, and is affiliated with the misc_RNA class.

Additional gene information for 5MWI_A-002 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for 5MWI_A-002 Gene

Genomics for 5MWI_A-002 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for 5MWI_A-002 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J054788 Enhancer 0.3 Ensembl 600.7 -1.7 -1661 0.6 ZNF148 5MWI_A-002 TTC22 PARS2
GH01J054790 Enhancer 0.3 Ensembl 600.7 +0.0 39 0.4 ZNF513 5MWI_A-002 ENSG00000237453 TTC22 PARS2
GH01J054775 Enhancer 0.8 Ensembl ENCODE 0.4 -15.5 -15458 0.6 DDX20 PKNOX1 REST PBX2 SP2 CBX3 SP1 USF2 USF1 MNT PARS2 5MWI_A-002 TTC22
GH01J054776 Enhancer 0.7 Ensembl dbSUPER 0.4 -14.3 -14261 0.6 ZIC2 OSR2 ZBTB48 ZNF423 WT1 KLF17 FEZF1 PRDM6 GLIS1 KLF1 PARS2 5MWI_A-002 TTC22
GH01J054781 Enhancer 0.6 Ensembl dbSUPER 0.4 -9.3 -9311 0.6 KDM1A CEBPB POLR2A EZH2 5MWI_A-002 PARS2 TTC22
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around 5MWI_A-002 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for 5MWI_A-002 Gene

Genomic Locations for 5MWI_A-002 Gene
chr1:54,790,762-54,790,787
(GRCh38/hg38)
Size:
26 bases
Orientation:
Plus strand

Genomic View for 5MWI_A-002 Gene

Genes around 5MWI_A-002 on UCSC Golden Path with GeneCards custom track
5MWI_A-002 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

5MWI_A-002 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for 5MWI_A-002 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for 5MWI_A-002 Gene

Proteins for 5MWI_A-002 Gene

Post-translational modifications for 5MWI_A-002 Gene

No Post-translational modifications

No data available for DME Specific Peptides for 5MWI_A-002 Gene

Domains & Families for 5MWI_A-002 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for 5MWI_A-002 Gene

Function for 5MWI_A-002 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for 5MWI_A-002 Gene

Localization for 5MWI_A-002 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for 5MWI_A-002 Gene

Pathways & Interactions for 5MWI_A-002 Gene

PathCards logo

SuperPathways for 5MWI_A-002 Gene

No Data Available

Gene Ontology (GO) - Biological Process for 5MWI_A-002 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for 5MWI_A-002 Gene

Drugs & Compounds for 5MWI_A-002 Gene

No Compound Related Data Available

Transcripts for 5MWI_A-002 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for 5MWI_A-002 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000B21DD0_9606 misc_RNA 26 1

PDBe: 5MWI_A,

5MWI_A-002 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for 5MWI_A-002 Gene

No ASD Table

Relevant External Links for 5MWI_A-002 Gene

GeneLoc Exon Structure for
5MWI_A-002

No data available for mRNA/cDNA for 5MWI_A-002 Gene

Expression for 5MWI_A-002 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for 5MWI_A-002 Gene

Orthologs for 5MWI_A-002 Gene

No data available for Orthologs and Evolution for 5MWI_A-002 Gene

Paralogs for 5MWI_A-002 Gene

No data available for Paralogs for 5MWI_A-002 Gene

Variants for 5MWI_A-002 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for 5MWI_A-002 Gene

Disorders for 5MWI_A-002 Gene

No disorders were found for 5MWI_A-002 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for 5MWI_A-002 Gene

Publications for 5MWI_A-002 Gene

No publications were found for 5MWI_A-002 Gene.

No data available for Mastermind for 5MWI_A-002 Gene

Products for 5MWI_A-002 Gene

Sources for 5MWI_A-002 Gene