window.introHome=introJs().setOptions({steps:[{title:"Welcome to GeneCards",intro:"<p>This tutorial will provide you with a brief overview of the GeneCards homepage and how to use it, including:<\/p><p><ul><li>Exploring genes<\/li><li>Accessing other GeneCards Suite knowledgebases and tools<\/li><\/ul><\/p><p>At any point, you can use the Enter key or click on the Next button to move forward - or on any of the navigation circles below to jump around in the tutorial.<\/p>",element:"body"},{title:"Explore a gene",intro:'<p>This area allows you to enter a gene to explore or to use GeneCards\'s powerful search engine to find information about genes and their annotations.<\/p><p>Enter a gene symbol to go directly to that page, or enter a term or set of terms to find them in the knowledgebase.<\/p><p>You can also click on "Advanced" to enter the Advanced Search mode.<\/p>',element:"#intro_hero_box"},{title:"GeneCards Suite Knowledgebases",intro:"Here, you can find other databases and tools provided by the GeneCards suite. Click on Next to go through them.",element:"#intro_suite"},{title:"MalaCards - Human Disease Database",intro:'The MalaCards disease and disorders database is organized into "disease cards", each integrating prioritized information, and listing numerous known aliases for each disease, along with a variety of annotations, as well as inter-disease connections, empowered by the GeneCards relational database, searches, and GeneAnalytics gene-set-analyses. Annotations include: symptoms, drugs, articles, related genes, clinical trials, related diseases/disorders and more.',element:".suiteMember.MalaCards"},{title:"GeneHancer - Integrated Regulatory Elements",intro:"GeneHancer is a regulatory element database within the GeneCards Suite, with 400,000 enhancer and promoter entries, covering 18% of the genome. Integrating key epigenetic resources, GeneHancer creates a unique non-redundant and comprehensive view of regulatory elements annotated with functional information including accurate genomic coordinates, target gene associations, transcription factor binding sites, and tissue specificity patterns.",element:".suiteMember.GeneHancer"},{title:"GeneCaRNA - Non-coding RNA Database",intro:"The Human ncRNA Database GeneCaRNA is a searchable, integrative database that provides comprehensive, user-friendly information about all non-coding RNA (ncRNA) human genes.<\/div><div>GeneCaRNA inherits its capabilities from the GeneCards framework within which it is embedded.<\/div><div>The GeneCards infrastructure encompasses > 150 automatically-mined data sources; a large number of them contribute ncRNA annotations.",element:".suiteMember.GeneCaRNA"},{title:"PathCards - Integrated pathways",intro:"PathCards is an integrated database of human biological pathways and their annotations. Human pathways were clustered into SuperPaths based on gene content similarity. Each PathCard provides information on one SuperPath, which represents one or more human pathways. It includes 1590 SuperPath entries, consolidated from 11 sources.",element:".suiteMember.PathCards"},{title:"GeneAnalytics - Gene Set Analysis",intro:"GeneAnalytics enables researchers to easily explore gene sets and their shared annotations, including expression and functional information. View tutorials and <a href='https://geneanalytics.genecards.org/case-studies/' target='_blank'>case studies<\/a>.",element:".suiteMember.GeneAnalytics"},{title:"GeneALaCart - GeneCards Batch Queries",intro:'GeneALaCart generates a file of GeneCards annotations associated with your list of genes. For each query, you supply the "batch" of gene identifiers and select the annotations that interest you; GeneALaCart then extracts the information from GeneCards, and produces a customized results file.',element:".suiteMember.GeneALaCart"},{title:"VarElect - NGS Phenotype-Genotype Search Engine",intro:"<p>The Next Generation Sequencing Phenotyper (view <a href='https://www.youtube.com/watch?v=rH1L4dGIS4g' target='_blank'>tutorial<\/a>/case study).<\/p><p>Rapid prioritization of variant genes based on disease/phenotype of interest.<\/p><p>Strengths:<\/p><ol><li>Provides direct, and also indirect disease - gene links<\/li><li>Multi-source integration<\/li><li>Direct access to supporting evidence and further information<\/li><li>Proprietary and unique matching algorithm<\/li><\/ol><\/p>",element:".suiteMember.VarElect"},{title:"GenesLikMe - Gene Similarity",intro:"GenesLikeMe is a novel analysis tool which provides a similarity metric by highlighting shared descriptors between genes, based on the rich annotation within the GeneCards compendium of human genes. Users supply a query gene, and the system finds putative functional paralogs, namely genes that are similar to the query gene based on combinatorial similarity of attribute annotations.",element:".suiteMember.GenesLikeMe"},{title:"Version information and stats",intro:"<p>Here you can find information about the current release version and its contents. <a href='/Guide/News' target='_blank'>Click here<\/a> to see what's new in the current version.<\/p><p><p>The statistics area below includes categories of genes segregated under protein coding, non-coding, functional elements, pseudogenes, genetic loci, gene clusters and uncategorized, including counts and sample genes.<\/p>",element:"#gcStats"},{title:"Gene List Index",intro:"GeneCards also provides a quick index to all of the genes currently available in the GeneCards database, in alphabetical order.",element:"#geneIndex"},{title:"Navigation menu",intro:"<p>Finally, in the top menu, you can find quick links to additional information and to the GeneCards Knowledgebase tools, including:<\/p><ul><li><b>Analysis Tools<\/b> - A listing of all Suite members and tools<\/li><li><b>Release Notes<\/b> - Information about the current and previous version of GeneCards, together with a list of improvements and changes<\/li><li><b>About<\/b> - Our publications, how to cite us, papers that cite us, the GeneCards team, a list of sources we acquire data from, and information about the Weizmann Institute of Science and LifeMap Sciences (our funding agency and scientific partner)<\/li><li><b>Data Access<\/b> - Information about data collaboration and licensing<\/li><li><b>Help<\/b> - Access to our user guide, and to this and other interactive introductions<\/li><\/ul>",element:"#mainMenu"},{title:"Contacting us",intro:"Feel free to reach out to us directly in case you have any question or feedback!",element:"#kayako-messenger-frame"}],tooltipClass:"introjs-tooltip-gc"})