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Aliases for MINA Gene

Aliases for MINA Gene

  • MYC Induced Nuclear Antigen 2 3
  • MINA53 3 4 6
  • MDIG 3 4 6
  • 60S Ribosomal Protein L27a Histidine Hydroxylase 3 4
  • Mineral Dust-Induced Gene Protein 3 4
  • Histone Lysine Demethylase MINA 3 4
  • Ribosomal Oxygenase MINA 3 4
  • Nucleolar Protein 52 3 4
  • NO52 3 4
  • ROX 3 4
  • Bifunctional Lysine-Specific Demethylase And Histidyl-Hydroxylase MINA 3
  • Myc-Induced Nuclear Antigen, 53 KDa 3
  • Mineral Dust Induced Gene Protein 3
  • MYC-Induced Nuclear Antigen 4
  • EC 1.14.11.- 4

External Ids for MINA Gene

Previous GeneCards Identifiers for MINA Gene

  • GC03M098985
  • GC03M099146
  • GC03M097660
  • GC03M095030

Summaries for MINA Gene

Entrez Gene Summary for MINA Gene

  • MINA is a c-Myc (MYC; MIM 190080) target gene that may play a role in cell proliferation or regulation of cell growth. (Tsuneoka et al., 2002 [PubMed 12091391]; Zhang et al., 2005 [PubMed 15897898]).[supplied by OMIM, May 2008]

GeneCards Summary for MINA Gene

MINA (MYC Induced Nuclear Antigen) is a Protein Coding gene. Among its related pathways are Validated targets of C-MYC transcriptional activation. GO annotations related to this gene include dioxygenase activity and RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription.

UniProtKB/Swiss-Prot for MINA Gene

  • Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. Is involved in the demethylation of trimethylated Lys-9 on histone H3 (H3K9me3), leading to an increase in ribosomal RNA expression. Also catalyzes the hydroxylation of 60S ribosomal protein L27a on His-39. May play an important role in cell growth and survival. May be involved in ribosome biogenesis, most likely during the assembly process of pre-ribosomal particles.

Gene Wiki entry for MINA Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MINA Gene

Genomics for MINA Gene

Regulatory Elements for MINA Gene

Genomic Location for MINA Gene

Start:
97,941,817 bp from pter
End:
97,972,457 bp from pter
Size:
30,641 bases
Orientation:
Minus strand

Genomic View for MINA Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MINA Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MINA Gene

Proteins for MINA Gene

  • Protein details for MINA Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IUF8-MINA_HUMAN
    Recommended name:
    Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA
    Protein Accession:
    Q8IUF8
    Secondary Accessions:
    • D3DN35
    • Q6AHW4
    • Q6SKS0
    • Q8IU69
    • Q8IUF6
    • Q8IUF7
    • Q96C17
    • Q96KB0

    Protein attributes for MINA Gene

    Size:
    465 amino acids
    Molecular mass:
    52800 Da
    Cofactor:
    Name=Fe(2+); Xref=ChEBI:CHEBI:29033; Note=Binds 1 Fe(2+) ion per subunit.;
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAH10679.1; Type=Erroneous termination; Positions=431; Note=Translated as Trp.; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for MINA Gene

    Alternative splice isoforms for MINA Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for MINA Gene

Proteomics data for MINA Gene at MOPED

Post-translational modifications for MINA Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for MINA Gene

Domains for MINA Gene

Protein Domains for MINA Gene

Suggested Antigen Peptide Sequences for MINA Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8IUF8

UniProtKB/Swiss-Prot:

MINA_HUMAN :
  • Q8IUF8
Domain:
  • Contains 1 JmjC domain.
Family:
  • Belongs to the MINA53/NO66 family.
genes like me logo Genes that share domains with MINA: view

No data available for Gene Families for MINA Gene

Function for MINA Gene

Molecular function for MINA Gene

UniProtKB/Swiss-Prot CatalyticActivity: L-histidine-[60S ribosomal protein L27a] + 2-oxoglutarate + O(2) = (3S)-3-hydroxy-L-histidine-[60S ribosomal protein L27a] + succinate + CO(2).
UniProtKB/Swiss-Prot Function: Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. Is involved in the demethylation of trimethylated Lys-9 on histone H3 (H3K9me3), leading to an increase in ribosomal RNA expression. Also catalyzes the hydroxylation of 60S ribosomal protein L27a on His-39. May play an important role in cell growth and survival. May be involved in ribosome biogenesis, most likely during the assembly process of pre-ribosomal particles.
UniProtKB/Swiss-Prot Induction: Up-regulated in response to MYC, in alveolar macrophages from coal miners and in silica particle-treated A549 lung cancer cells.

Enzyme Numbers (IUBMB) for MINA Gene

Gene Ontology (GO) - Molecular Function for MINA Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001191 RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription IEA --
GO:0046872 metal ion binding IEA --
GO:0051213 dioxygenase activity IEA --
genes like me logo Genes that share ontologies with MINA: view
genes like me logo Genes that share phenotypes with MINA: view

Animal Models for MINA Gene

MGI Knock Outs for MINA:

miRNA for MINA Gene

No data available for Transcription Factor Targeting and HOMER Transcription for MINA Gene

Localization for MINA Gene

Subcellular locations from UniProtKB/Swiss-Prot for MINA Gene

Nucleus. Nucleus, nucleolus.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MINA Gene COMPARTMENTS Subcellular localization image for MINA gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for MINA Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005667 transcription factor complex IEA --
GO:0005730 nucleolus IDA --
GO:0005737 cytoplasm IDA --
GO:0005829 cytosol IEA --
genes like me logo Genes that share ontologies with MINA: view

Pathways for MINA Gene

genes like me logo Genes that share pathways with MINA: view

Pathways by source for MINA Gene

1 BioSystems pathway for MINA Gene

Gene Ontology (GO) - Biological Process for MINA Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000122 negative regulation of transcription from RNA polymerase II promoter IEA --
GO:0006351 transcription, DNA-templated IEA --
GO:0042254 ribosome biogenesis IEA --
GO:0055114 oxidation-reduction process IEA --
genes like me logo Genes that share ontologies with MINA: view

Transcripts for MINA Gene

Unigene Clusters for MINA Gene

MYC induced nuclear antigen:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MINA Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7a · 7b · 7c ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13a · 13b ^ 14a · 14b
SP1: - - -
SP2: -
SP3: - -
SP4: -
SP5: - -
SP6:
SP7: -
SP8:
SP9:

Relevant External Links for MINA Gene

GeneLoc Exon Structure for
MINA
ECgene alternative splicing isoforms for
MINA

Expression for MINA Gene

mRNA expression in normal human tissues for MINA Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for MINA Gene

SOURCE GeneReport for Unigene cluster for MINA Gene Hs.570562

mRNA Expression by UniProt/SwissProt for MINA Gene

Q8IUF8-MINA_HUMAN
Tissue specificity: Expressed in liver, skeletal muscle, heart, pancreas, and placenta. Not detected in brain, lung or kidney. Expressed in several lung cancer tissues, but is barely detected in the adjacent non-cancerous tissues. Also highly expressed in several esophageal squamous cell carcinoma (ESCC), and colon cancer tissues, and in various cancer cell lines.
genes like me logo Genes that share expressions with MINA: view

No data available for mRNA differential expression in normal tissues for MINA Gene

Orthologs for MINA Gene

This gene was present in the common ancestor of animals.

Orthologs for MINA Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MINA 35
  • 99.43 (n)
  • 99.35 (a)
MINA 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia MINA 35
  • 85.76 (n)
  • 85.47 (a)
MINA 36
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia MINA 35
  • 80.13 (n)
  • 79.91 (a)
MINA 36
  • 64 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mina 35
  • 80.93 (n)
  • 76.56 (a)
Mina 16
Mina 36
  • 77 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia MINA 36
  • 69 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia MINA 36
  • 78 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Mina 35
  • 82.15 (n)
  • 79.57 (a)
chicken
(Gallus gallus)
Aves MINA 35
  • 70.78 (n)
  • 71.86 (a)
MINA 36
  • 70 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 64 (a)
OneToMany
-- 36
  • 64 (a)
OneToMany
African clawed frog
(Xenopus laevis)
Amphibia Xl.14893 35
tropical clawed frog
(Silurana tropicalis)
Amphibia mina 35
  • 59.19 (n)
  • 55.77 (a)
Str.7087 35
zebrafish
(Danio rerio)
Actinopterygii minal 35
  • 59.7 (n)
  • 60.56 (a)
minal 36
  • 51 (a)
OneToOne
zgc63873 35
fruit fly
(Drosophila melanogaster)
Insecta CG2982 36
  • 18 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea jmjc-1 36
  • 17 (a)
OneToOne
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.10438 35
sea squirt
(Ciona savignyi)
Ascidiacea CSA.8544 36
  • 36 (a)
OneToOne
Species with no ortholog for MINA:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for MINA Gene

ENSEMBL:
Gene Tree for MINA (if available)
TreeFam:
Gene Tree for MINA (if available)

Paralogs for MINA Gene

Selected SIMAP similar genes for MINA Gene using alignment to 4 proteins:

Pseudogenes.org Pseudogenes for MINA Gene

genes like me logo Genes that share paralogs with MINA: view

No data available for Paralogs for MINA Gene

Variants for MINA Gene

Sequence variations from dbSNP and Humsavar for MINA Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs699304 -- 97,967,731(+) ACACC(C/T)TCGTG intron-variant
rs832076 -- 97,947,809(+) CTTCT(C/T)GCTCA intron-variant
rs832077 -- 97,948,099(+) AACAC(C/T)GAAGT intron-variant
rs832078 -- 97,950,195(+) AAACA(C/T)TGTTA intron-variant
rs832079 -- 97,954,424(+) TGAGT(A/C)GAGTG synonymous-codon, reference, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MINA Gene

Variant ID Type Subtype PubMed ID
nsv520553 CNV Gain 19592680

Relevant External Links for MINA Gene

HapMap Linkage Disequilibrium report
MINA

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MINA Gene

Disorders for MINA Gene

No disorders were found for MINA Gene.

No data available for UniProtKB/Swiss-Prot for MINA Gene

Publications for MINA Gene

  1. A novel myc target gene, mina53, that is involved in cell proliferation. (PMID: 12091391) Tsuneoka M. … Kimura H. (J. Biol. Chem. 2002) 2 3 4 23
  2. Increased expression of a Myc target gene Mina53 in human colon cancer. (PMID: 14695334) Teye K. … Kimura H. (Am. J. Pathol. 2004) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. NO66, a highly conserved dual location protein in the nucleolus and in a special type of synchronously replicating chromatin. (PMID: 14742713) Eilbracht J. … Schmidt-Zachmann M.S. (Mol. Biol. Cell 2004) 3 4
  5. Mina53 as a potential prognostic factor for esophageal squamous cell carcinoma. (PMID: 15534111) Tsuneoka M. … Kimura H. (Clin. Cancer Res. 2004) 3 4

Products for MINA Gene

  • Addgene plasmids for MINA

Sources for MINA Gene

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