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Aliases for KIAA1841 Gene

Aliases for KIAA1841 Gene

  • KIAA1841 2 3

External Ids for KIAA1841 Gene

Summaries for KIAA1841 Gene

GeneCards Summary for KIAA1841 Gene

KIAA1841 (KIAA1841) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KIAA1841 Gene

Genomics for KIAA1841 Gene

Genomic Location for KIAA1841 Gene

Start:
61,065,870 bp from pter
End:
61,138,034 bp from pter
Size:
72,165 bases
Orientation:
Plus strand

Genomic View for KIAA1841 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KIAA1841 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KIAA1841 Gene

Regulatory Elements for KIAA1841 Gene

Proteins for KIAA1841 Gene

  • Protein details for KIAA1841 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6NSI8-K1841_HUMAN
    Recommended name:
    Uncharacterized protein KIAA1841
    Protein Accession:
    Q6NSI8
    Secondary Accessions:
    • Q49AF0
    • Q6ZND0
    • Q96JI6

    Protein attributes for KIAA1841 Gene

    Size:
    718 amino acids
    Molecular mass:
    82007 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB47470.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for KIAA1841 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for KIAA1841 Gene

Proteomics data for KIAA1841 Gene at MOPED

Post-translational modifications for KIAA1841 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for KIAA1841 Gene

No data available for DME Specific Peptides for KIAA1841 Gene

Domains for KIAA1841 Gene

Protein Domains for KIAA1841 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

K1841_HUMAN
Family:
  • Belongs to the KIAA1841 family.:
    • Q6NSI8
genes like me logo Genes that share domains with KIAA1841: view

No data available for Gene Families for KIAA1841 Gene

Function for KIAA1841 Gene

Gene Ontology (GO) - Molecular Function for KIAA1841 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding --
genes like me logo Genes that share ontologies with KIAA1841: view

miRNA for KIAA1841 Gene

miRTarBase miRNAs that target KIAA1841

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for KIAA1841 Gene

Localization for KIAA1841 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for KIAA1841 Gene COMPARTMENTS Subcellular localization image for KIAA1841 gene
Compartment Confidence
extracellular 2
cytosol 1
mitochondrion 1
nucleus 1

No data available for Gene Ontology (GO) - Cellular Components for KIAA1841 Gene

Pathways for KIAA1841 Gene

SuperPathways for KIAA1841 Gene

No Data Available

Interacting Proteins for KIAA1841 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000349154%0d%0a9606.ENSP00000362931%0d%0a
Selected Interacting proteins: ENSP00000349154 for KIAA1841 Gene via STRING

Symbol External ID(s) Details
SRPK1

Gene Ontology (GO) - Biological Process for KIAA1841 Gene

None

No data available for Pathways by source for KIAA1841 Gene

Transcripts for KIAA1841 Gene

Unigene Clusters for KIAA1841 Gene

KIAA1841:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KIAA1841 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20a · 20b ^ 21 ^ 22a · 22b ^ 23a ·
SP1: - - - - -
SP2: - - - - - -
SP3: - - - - - -
SP4:
SP5:
SP6:
SP7:

ExUns: 23b ^ 24 ^ 25
SP1: -
SP2: - -
SP3: -
SP4:
SP5:
SP6:
SP7:

Relevant External Links for KIAA1841 Gene

GeneLoc Exon Structure for
KIAA1841
ECgene alternative splicing isoforms for
KIAA1841

Expression for KIAA1841 Gene

mRNA expression in normal human tissues for KIAA1841 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for KIAA1841 Gene

SOURCE GeneReport for Unigene cluster for KIAA1841 Gene Hs.468653

genes like me logo Genes that share expressions with KIAA1841: view

Orthologs for KIAA1841 Gene

This gene was present in the common ancestor of animals.

Orthologs for KIAA1841 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KIAA1841 36
  • 99.54 (n)
  • 99.16 (a)
KIAA1841 37
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia KIAA1841 36
  • 92.15 (n)
  • 92.34 (a)
KIAA1841 37
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 0610010F05Rik 36
  • 88.21 (n)
  • 88.58 (a)
0610010F05Rik 16
0610010F05Rik 37
  • 89 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia KIAA1841 37
  • 82 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia KIAA1841 37
  • 82 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1305110 36
  • 87.19 (n)
  • 88.37 (a)
chicken
(Gallus gallus)
Aves KIAA1841 36
  • 77.11 (n)
  • 75.91 (a)
KIAA1841 37
  • 76 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia KIAA1841 37
  • 77 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.34417 36
tropical clawed frog
(Silurana tropicalis)
Amphibia kiaa1841 36
  • 70.35 (n)
  • 70.87 (a)
Str.19410 36
zebrafish
(Danio rerio)
Actinopterygii LOC793832 36
  • 62.82 (n)
  • 61.67 (a)
si:ch211-189k9.2 37
  • 59 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG6761 37
  • 20 (a)
OneToOne
CG6761 38
  • 34 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 41 (a)
OneToOne
Species with no ortholog for KIAA1841:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for KIAA1841 Gene

ENSEMBL:
Gene Tree for KIAA1841 (if available)
TreeFam:
Gene Tree for KIAA1841 (if available)

Paralogs for KIAA1841 Gene

No data available for Paralogs for KIAA1841 Gene

Variants for KIAA1841 Gene

Sequence variations from dbSNP and Humsavar for KIAA1841 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs895529 -- 61,127,639(+) ATTTT(C/T)CCCAC intron-variant
rs997170 -- 61,069,985(+) AATCC(C/T)TGCTC intron-variant
rs1138716 -- 61,123,979(+) gtccc(A/G)gctac utr-variant-3-prime, intron-variant
rs1177260 -- 61,109,681(-) aaaaa(A/C)aaaca intron-variant
rs1177261 -- 61,109,583(-) CTCAG(C/G)TACAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KIAA1841 Gene

Variant ID Type Subtype PubMed ID
nsv874210 CNV Gain 21882294
nsv874211 CNV Loss 21882294

Relevant External Links for KIAA1841 Gene

HapMap Linkage Disequilibrium report
KIAA1841

Disorders for KIAA1841 Gene

Relevant External Links for KIAA1841

Genetic Association Database (GAD)
KIAA1841
Human Genome Epidemiology (HuGE) Navigator
KIAA1841
genes like me logo Genes that share disorders with KIAA1841: view

No data available for UniProtKB/Swiss-Prot for KIAA1841 Gene

Publications for KIAA1841 Gene

  1. Prediction of the coding sequences of unidentified human genes. XX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 11347906) Nagase T. … Ohara O. (DNA Res. 2001) 2 3 4
  2. Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling. (PMID: 19240061) Trynka G. … Wijmenga C. (Gut 2009) 3 49
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  4. A genome-wide scan of Ashkenazi Jewish Crohn's disease suggests novel susceptibility loci. (PMID: 22412388) Kenny E.E. … Peter I. (PLoS Genet. 2012) 3
  5. Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. (PMID: 23128233) Jostins L. … Cho J.H. (Nature 2012) 3

Products for KIAA1841 Gene

Sources for KIAA1841 Gene

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