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Aliases for RHBG Gene

Aliases for RHBG Gene

  • Rh Family B Glycoprotein (Gene/Pseudogene) 2 3
  • Rhesus Blood Group, B Glycoprotein 2 3
  • Rhesus Blood Group Family Type B Glycoprotein 4
  • Rh Family, B Glycoprotein (Gene/Pseudogene) 5
  • Rh Family Type B Glycoprotein 4
  • Rh Family, B Glycoprotein 3
  • Rh Type B Glycoprotein 4
  • SLC42A2 3

External Ids for RHBG Gene

Previous GeneCards Identifiers for RHBG Gene

  • GC01P154207
  • GC01P152104
  • GC01P153116
  • GC01P153555
  • GC01P153152
  • GC01P154605
  • GC01P127699

Summaries for RHBG Gene

Entrez Gene Summary for RHBG Gene

  • This gene encodes one of two non-erythroid members of the Rhesus (Rh) protein family. Non-erythroid Rh protein family members are mainly expressed in the kidney and belong to the methylammonium-ammonium permease/ammonia transporters superfamily. All Rh family proteins are predicted to be transmembrane proteins with 12 membrane spanning domains and intracytoplasmic N- and C-termini. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Jan 2012]

GeneCards Summary for RHBG Gene

RHBG (Rh Family B Glycoprotein (Gene/Pseudogene)) is a Protein Coding gene. Among its related pathways are Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds. GO annotations related to this gene include ankyrin binding and ammonium transmembrane transporter activity. An important paralog of this gene is RHCE.

UniProtKB/Swiss-Prot for RHBG Gene

  • Functions as a specific ammonium transporter.

Gene Wiki entry for RHBG Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RHBG Gene

Genomics for RHBG Gene

Regulatory Elements for RHBG Gene

Enhancers for RHBG Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RHBG on UCSC Golden Path with GeneCards custom track

Genomic Location for RHBG Gene

Chromosome:
1
Start:
156,366,043 bp from pter
End:
156,385,234 bp from pter
Size:
19,192 bases
Orientation:
Plus strand

Genomic View for RHBG Gene

Genes around RHBG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RHBG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RHBG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RHBG Gene

Proteins for RHBG Gene

  • Protein details for RHBG Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H310-RHBG_HUMAN
    Recommended name:
    Ammonium transporter Rh type B
    Protein Accession:
    Q9H310
    Secondary Accessions:
    • A8K475
    • Q5SZW4
    • Q5SZW6
    • Q5SZW7
    • Q6P193
    • Q6YJI2
    • Q6YJI3

    Protein attributes for RHBG Gene

    Size:
    441 amino acids
    Molecular mass:
    47231 Da
    Quaternary structure:
    • Interacts (via C-terminus) with ANK2 and ANK3; required for targeting to the basolateral membrane.
    SequenceCaution:
    • Sequence=AAG01086.1; Type=Frameshift; Positions=425; Evidence={ECO:0000305}; Sequence=AAL05978.1; Type=Frameshift; Positions=425; Evidence={ECO:0000305}; Sequence=AAN34363.1; Type=Frameshift; Positions=425; Evidence={ECO:0000305}; Sequence=AAN34364.1; Type=Frameshift; Positions=425; Evidence={ECO:0000305};

    Alternative splice isoforms for RHBG Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for RHBG Gene

Proteomics data for RHBG Gene at MOPED

Post-translational modifications for RHBG Gene

Other Protein References for RHBG Gene

No data available for DME Specific Peptides for RHBG Gene

Domains & Families for RHBG Gene

Gene Families for RHBG Gene

HGNC:
IUPHAR :

Graphical View of Domain Structure for InterPro Entry

Q9H310

UniProtKB/Swiss-Prot:

RHBG_HUMAN :
  • Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
Family:
  • Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
genes like me logo Genes that share domains with RHBG: view

Function for RHBG Gene

Molecular function for RHBG Gene

UniProtKB/Swiss-Prot Function:
Functions as a specific ammonium transporter.
genes like me logo Genes that share phenotypes with RHBG: view

Animal Models for RHBG Gene

MGI Knock Outs for RHBG:

Animal Model Products

  • Taconic Biosciences Mouse Models for RHBG

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , miRNA , Transcription Factor Targets and HOMER Transcription for RHBG Gene

Localization for RHBG Gene

Subcellular locations from UniProtKB/Swiss-Prot for RHBG Gene

Basolateral cell membrane; Multi-pass membrane protein. Cytoplasmic vesicle membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for RHBG Gene COMPARTMENTS Subcellular localization image for RHBG gene
Compartment Confidence
plasma membrane 5
cytoskeleton 4
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for RHBG Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0014731 spectrin-associated cytoskeleton IMP 18635543
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with RHBG: view

Pathways & Interactions for RHBG Gene

genes like me logo Genes that share pathways with RHBG: view

Interacting Proteins for RHBG Gene

Gene Ontology (GO) - Biological Process for RHBG Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0019740 nitrogen utilization IBA --
genes like me logo Genes that share ontologies with RHBG: view

No data available for SIGNOR curated interactions for RHBG Gene

Drugs & Compounds for RHBG Gene

(1) Drugs for RHBG Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(3) Additional Compounds for RHBG Gene - From: Novoseek and HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
Ammonia
  • Ammonia anhydrous
  • Ammonia inhalant
  • Ammonia solution strong [usan]
  • Ammonia water
  • Ammoniak
7664-41-7
genes like me logo Genes that share compounds with RHBG: view

Transcripts for RHBG Gene

Unigene Clusters for RHBG Gene

Rh family, B glycoprotein (gene/pseudogene):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RHBG Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11
SP1: - -
SP2: - -
SP3: - - -
SP4: - -
SP5: -
SP6:

Relevant External Links for RHBG Gene

GeneLoc Exon Structure for
RHBG
ECgene alternative splicing isoforms for
RHBG

Expression for RHBG Gene

mRNA expression in normal human tissues for RHBG Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for RHBG Gene

This gene is overexpressed in Kidney - Cortex (x12.8), Brain - Cerebellum (x9.2), Brain - Cerebellar Hemisphere (x8.7), Ovary (x7.9), and Liver (x4.2).

Protein differential expression in normal tissues from HIPED for RHBG Gene

This gene is overexpressed in Peripheral blood mononuclear cells (41.4) and Liver (26.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for RHBG Gene



SOURCE GeneReport for Unigene cluster for RHBG Gene Hs.131835

mRNA Expression by UniProt/SwissProt for RHBG Gene

Q9H310-RHBG_HUMAN
Tissue specificity: Specifically expressed in kidney. Also detected in liver and ovary.
genes like me logo Genes that share expression patterns with RHBG: view

Protein tissue co-expression partners for RHBG Gene

Primer Products

Orthologs for RHBG Gene

This gene was present in the common ancestor of animals.

Orthologs for RHBG Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia RHBG 35
  • 89.52 (n)
  • 88.7 (a)
RHBG 36
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia RHBG 35
  • 87.19 (n)
  • 87.12 (a)
RHBG 36
  • 72 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rhbg 35
  • 85.57 (n)
  • 85.49 (a)
Rhbg 16
Rhbg 36
  • 81 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia RHBG 35
  • 99.34 (n)
  • 99.13 (a)
RHBG 36
  • 93 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Rhbg 35
  • 85.04 (n)
  • 85.94 (a)
oppossum
(Monodelphis domestica)
Mammalia RHBG 36
  • 76 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia RHBG 36
  • 64 (a)
OneToOne
chicken
(Gallus gallus)
Aves RHBG 36
  • 48 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 38 (a)
ManyToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia rhbg 35
  • 65.97 (n)
  • 66.2 (a)
African clawed frog
(Xenopus laevis)
Amphibia MGC68642 35
zebrafish
(Danio rerio)
Actinopterygii rhbg 35
  • 65.02 (n)
  • 66.2 (a)
rhbg 36
  • 60 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta Rh50 37
  • 45 (a)
Rh50 35
  • 55.53 (n)
  • 47.63 (a)
Rh50 36
  • 42 (a)
OneToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP002011 35
  • 54.7 (n)
  • 47.88 (a)
worm
(Caenorhabditis elegans)
Secernentea rhr-1 37
  • 40 (a)
rhr-2 37
  • 41 (a)
rhr-1 36
  • 37 (a)
ManyToMany
rhr-2 36
  • 37 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 42 (a)
ManyToMany
CSA.7075 36
  • 45 (a)
ManyToMany
CSA.7848 36
  • 43 (a)
ManyToMany
Species with no ortholog for RHBG:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for RHBG Gene

ENSEMBL:
Gene Tree for RHBG (if available)
TreeFam:
Gene Tree for RHBG (if available)

Paralogs for RHBG Gene

Paralogs for RHBG Gene

genes like me logo Genes that share paralogs with RHBG: view

Variants for RHBG Gene

Sequence variations from dbSNP and Humsavar for RHBG Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs2245623 - 156,377,340(-) GGAAG(C/T)CAAAG intron-variant, nc-transcript-variant, reference, missense, stop-gained
rs11586833 - 156,378,043(+) TGCCG(A/T)CCTGG intron-variant, nc-transcript-variant, reference, missense
rs3748569 - 156,381,908(-) AGTCC(C/T)AGCCA intron-variant, nc-transcript-variant, reference, missense
rs3748567 - 156,382,104(-) TCCAC(A/G)TGTGT nc-transcript-variant, reference, missense
rs752640 -- 156,382,221(+) AACCC(A/G)CACTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RHBG Gene

Variant ID Type Subtype PubMed ID
nsv872471 CNV Loss 21882294
nsv470742 CNV Loss 18288195

Variation tolerance for RHBG Gene

Gene Damage Index Score: 16.97; 97.99% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for RHBG Gene

Disorders for RHBG Gene

Relevant External Links for RHBG

Genetic Association Database (GAD)
RHBG
Human Genome Epidemiology (HuGE) Navigator
RHBG
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RHBG

No disorders were found for RHBG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RHBG Gene

Publications for RHBG Gene

  1. Electroneutral ammonium transport by basolateral rhesus B glycoprotein. (PMID: 15284342) Ludewig U. (J. Physiol. (Lond.) 2004) 3 4 23 67
  2. RhCG is the major putative ammonia transporter expressed in the human kidney, and RhBG is not expressed at detectable levels. (PMID: 19357182) Brown A.C. … Toye A.M. (Am. J. Physiol. Renal Physiol. 2009) 3 23
  3. Ammonium transport in the colonic crypt cell line, T84: role for Rhesus glycoproteins and NKCC1. (PMID: 18032481) Worrell R.T. … Matthews J.B. (Am. J. Physiol. Gastrointest. Liver Physiol. 2008) 3 23
  4. Phosphorylation and ankyrin-G binding of the C-terminal domain regulate targeting and function of the ammonium transporter RhBG. (PMID: 18635543) Sohet F. … Lopez C. (J. Biol. Chem. 2008) 3 23
  5. Molecular biology of Rh proteins and relevance to molecular medicine. (PMID: 16764738) Avent N.D. … Skinner L.H. (Expert Rev Mol Med 2006) 3 23

Products for RHBG Gene

Sources for RHBG Gene

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