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Aliases for PLCXD1 Gene

Aliases for PLCXD1 Gene

  • Phosphatidylinositol-Specific Phospholipase C, X Domain Containing 1 2 3
  • PI-PLC X Domain-Containing Protein 1 3
  • LL0XNC01-136G2.1 3

External Ids for PLCXD1 Gene

Summaries for PLCXD1 Gene

Entrez Gene Summary for PLCXD1 Gene

  • This gene is the most terminal protein-coding gene in the pseudoautosomal (PAR) region on chromosomes X and Y. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Mar 2010]

GeneCards Summary for PLCXD1 Gene

PLCXD1 (Phosphatidylinositol-Specific Phospholipase C, X Domain Containing 1) is a Protein Coding gene. GO annotations related to this gene include phosphoric diester hydrolase activity. An important paralog of this gene is PLCXD2.

Tocris Summary for PLCXD1 Gene

  • Phospholipases are a group of enzymes that hydrolyze phospholipids into fatty acids and other lipophilic molecules. PLC is subdivided into beta, gamma, delta, epsilon, zeta and eta subtypes, which catalyze the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) to inositol 1,4,5-trisphosphate (IP3) and 1,2-diacylglycerol (DAG). IP3 and DAG both have important second messenger functions. PLC-beta is primarily activated by Gq/11 proteins and PLC-gamma is activated by phosphorylation in response to a variety of growth factor and immune system signals. Phospholipases are ubiquitously expressed and have diverse biological functions including roles in inflammation, cell growth, signaling and death and maintenance of membrane phospholipids.

Gene Wiki entry for PLCXD1 Gene

No data available for UniProtKB/Swiss-Prot , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PLCXD1 Gene

Genomics for PLCXD1 Gene

Genomic Location for PLCXD1 Gene

Start:
276,322 bp from pter
End:
303,356 bp from pter
Size:
27,035 bases
Orientation:
Plus strand

Genomic View for PLCXD1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for PLCXD1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PLCXD1 Gene

Regulatory Elements for PLCXD1 Gene

Proteins for PLCXD1 Gene

  • Protein details for PLCXD1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NUJ7-PLCX1_HUMAN
    Recommended name:
    PI-PLC X domain-containing protein 1
    Protein Accession:
    Q9NUJ7
    Secondary Accessions:
    • A2BH51
    • A2BH52

    Protein attributes for PLCXD1 Gene

    Size:
    323 amino acids
    Molecular mass:
    36668 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • The gene coding for this protein is located in the pseudoautosomal region 1 (PAR1) of X and Y chromosomes
    SequenceCaution:
    • Sequence=CAM28359.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=CAM28360.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for PLCXD1 Gene

Proteomics data for PLCXD1 Gene at MOPED

Post-translational modifications for PLCXD1 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys227

No data available for DME Specific Peptides for PLCXD1 Gene

Domains for PLCXD1 Gene

Gene Families for PLCXD1 Gene

HGNC:
  • PAR1 :Pseudoautosomal regions / PAR1

Protein Domains for PLCXD1 Gene

UniProtKB/Swiss-Prot:

PLCX1_HUMAN
Domain:
  • Contains 1 PI-PLC X-box domain.:
    • Q9NUJ7
genes like me logo Genes that share domains with PLCXD1: view

Function for PLCXD1 Gene

Gene Ontology (GO) - Molecular Function for PLCXD1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008081 phosphoric diester hydrolase activity IEA --
genes like me logo Genes that share ontologies with PLCXD1: view

Phenotypes for PLCXD1 Gene

GenomeRNAi human phenotypes for PLCXD1:
genes like me logo Genes that share phenotypes with PLCXD1: view

miRNA for PLCXD1 Gene

miRTarBase miRNAs that target PLCXD1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for PLCXD1 Gene

Localization for PLCXD1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for PLCXD1 Gene COMPARTMENTS Subcellular localization image for PLCXD1 gene
Compartment Confidence
cytosol 2
extracellular 1
mitochondrion 1
nucleus 1

No data available for Gene Ontology (GO) - Cellular Components for PLCXD1 Gene

Pathways for PLCXD1 Gene

SuperPathways for PLCXD1 Gene

No Data Available

Interacting Proteins for PLCXD1 Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000371073%0d%0a9606.ENSP00000344818%0d%0a9606.ENSP00000385269%0d%0a
Selected Interacting proteins: ENSP00000371073 for PLCXD1 Gene via STRING

Gene Ontology (GO) - Biological Process for PLCXD1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006629 lipid metabolic process IEA --
genes like me logo Genes that share ontologies with PLCXD1: view

No data available for Pathways by source for PLCXD1 Gene

Compounds for PLCXD1 Gene

(5) Tocris Compounds for PLCXD1 Gene

Compound Action Cas Number
D609 Selective PC-PLC inhibitor [83373-60-8]
Edelfosine Selective PI-PLC inhibitor, also PAF receptor agonist [77286-66-9]
FIPI Phospholipase D inhibitor [939055-18-2]
m-3M3FBS Phospholipase C activator [200933-14-8]
U 73343 Inactive analog of U 73122 (Cat. No. 1268) [142878-12-4]

(379) HMDB Compounds for PLCXD1 Gene

Compound Synonyms Cas Number PubMed IDs
Phosphatidylinositol-3,4,5-trisphosphate
  • Phosphatidylinositol-3,4,5-trisphosphate
Not Available
PI(16:0/16:0)
  • Phosphatidylinositol(32:0)
Not Available
PI(16:0/16:1(9Z))
  • Phosphatidylinositol(32:1)
Not Available
PI(16:0/16:2(9Z,12Z))
  • Phosphatidylinositol(16:0/16:2n4)
Not Available
PI(16:0/18:0)
  • Phosphatidylinositol(16:0/18:0)
Not Available
genes like me logo Genes that share compounds with PLCXD1: view

Transcripts for PLCXD1 Gene

Unigene Clusters for PLCXD1 Gene

Phosphatidylinositol-specific phospholipase C, X domain containing 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for PLCXD1 Gene

No ASD Table

Relevant External Links for PLCXD1 Gene

GeneLoc Exon Structure for
PLCXD1
ECgene alternative splicing isoforms for
PLCXD1

Expression for PLCXD1 Gene

mRNA expression in normal human tissues for PLCXD1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

SOURCE GeneReport for Unigene cluster for PLCXD1 Gene Hs.522568

genes like me logo Genes that share expressions with PLCXD1: view

Orthologs for PLCXD1 Gene

This gene was present in the common ancestor of animals.

Orthologs for PLCXD1 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 37
  • 65 (a)
OneToMany
-- 37
  • 67 (a)
OneToMany
PLCXD1 37
  • 80 (a)
OneToMany
dog
(Canis familiaris)
Mammalia PLCXD1 36
  • 82.85 (n)
  • 84.31 (a)
PLCXD1 37
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Plcxd1 37
  • 61 (a)
OneToOne
403178 16
oppossum
(Monodelphis domestica)
Mammalia PLCXD1 37
  • 75 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia PLCXD1 37
  • 33 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC100909600 36
  • 74.61 (n)
  • 71.85 (a)
chicken
(Gallus gallus)
Aves PLCXD1 36
  • 61.92 (n)
  • 61.17 (a)
PLCXD1 37
  • 56 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia PLCXD1 37
  • 52 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia plcxd1 36
  • 55.52 (n)
  • 50 (a)
zebrafish
(Danio rerio)
Actinopterygii LOC563489 36
  • 55.56 (n)
  • 51 (a)
PLCXD1 37
  • 47 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG10747 37
  • 26 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea F38E9.1 37
  • 13 (a)
OneToMany
Species with no ortholog for PLCXD1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for PLCXD1 Gene

ENSEMBL:
Gene Tree for PLCXD1 (if available)
TreeFam:
Gene Tree for PLCXD1 (if available)

Paralogs for PLCXD1 Gene

Paralogs for PLCXD1 Gene

Selected SIMAP similar genes for PLCXD1 Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for PLCXD1 Gene

genes like me logo Genes that share paralogs with PLCXD1: view

Variants for PLCXD1 Gene

Structural Variations from Database of Genomic Variants (DGV) for PLCXD1 Gene

Variant ID Type Subtype PubMed ID
esv27600 CNV Gain+Loss 19812545
esv2663649 CNV Deletion 23128226
esv2658490 CNV Deletion 23128226
esv1006189 CNV Deletion 20482838

Relevant External Links for PLCXD1 Gene

HapMap Linkage Disequilibrium report
PLCXD1
Locus Specific Mutation Databases (LSDB)
PLCXD1

No data available for Sequence variations from dbSNP and Humsavar for PLCXD1 Gene

Disorders for PLCXD1 Gene

No disorders were found for PLCXD1 Gene.

No data available for UniProtKB/Swiss-Prot for PLCXD1 Gene

Publications for PLCXD1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  5. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K. … Gorospe M. (EMBO J. 2009) 3

Products for PLCXD1 Gene

Sources for PLCXD1 Gene

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