Aliases for OR3A1 Gene
Aliases for OR3A1 Gene
External Ids for OR3A1 Gene
- HGNC: 8282
- Entrez Gene: 4994
- Ensembl: ENSG00000180090
- UniProtKB: P47881
- HORDE: OR3A1
Previous GeneCards Identifiers for OR3A1 Gene
- GC17M003509
- GC17M003536
- GC17M003145
- GC17M003401
- GC17M003141
- GC17M003194
Summaries for OR3A1 Gene
-
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
GeneCards Summary for OR3A1 Gene
OR3A1 (Olfactory Receptor Family 3 Subfamily A Member 1) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Olfactory Signaling Pathway. Gene Ontology (GO) annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity. An important paralog of this gene is OR3A2.
UniProtKB/Swiss-Prot for OR3A1 Gene
-
Odorant receptor.
No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR3A1 Gene
Genomics for OR3A1 Gene
GeneHancer (GH) Regulatory Elements for OR3A1 Gene
Promoters and enhancers for OR3A1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17I003386 | Enhancer | 0.5 | FANTOM5 | 560.7 | -0.1 | -103 | 0.4 | POLR2A EZH2 | OR3A1 OR1R1P OR3A2 SPATA22 ASPA OR3A3 OR1E2 | |
| GH17I003244 | Enhancer | 0.2 | Ensembl | 7 | +141.3 | 141308 | 0.2 | OR3A1 OR1D4 GC17M003252 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around OR3A1 on UCSC Golden Path with GeneCards custom track
- Top Transcription factor binding sites by QIAGEN in the OR3A1 gene promoter:
Regulatory Element Products
Genomic Locations for OR3A1 Gene
Genomic Locations for OR3A1 Gene
- chr17:3,288,318-3,386,209
- (GRCh38/hg38)
- Size:
- 97,892 bases
- Orientation:
- Minus strand
- chr17:3,194,929-3,195,876
- (GRCh37/hg19)
Genomic View for OR3A1 Gene
Genes around OR3A1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17p13.3 by Ensembl
- 17p13.3 by Entrez Gene
- 17p13.3 by HGNC
OR3A1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for OR3A1 Gene
Proteins for OR3A1 Gene
-
Protein details for OR3A1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- P47881-OR3A1_HUMAN
- Recommended name:
- Olfactory receptor 3A1
- Protein Accession:
- P47881
- Q4VB06
- Q6IFM4
Protein attributes for OR3A1 Gene
- Size:
- 315 amino acids
- Molecular mass:
- 34609 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for OR3A1 Gene
- Glycosylation at isoforms=8
Other Protein References for OR3A1 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
- HORDE protein sequence:
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for OR3A1
- Origene Custom Protein Services for OR3A1
- Novus Biologicals proteins for OR3A1
- antibodies-online: Search results for 3 available OR3A1 Proteins ranked by validation data
- Compare Top OR3A1 Proteins
-
Quality Products:
- Search GeneTex for Proteins for OR3A1
Assay Products
No data available for DME Specific Peptides for OR3A1 Gene
Domains & Families for OR3A1 Gene
Gene Families for OR3A1 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- G-protein coupled receptors
- Predicted membrane proteins
Protein Domains for OR3A1 Gene
- InterPro:
- Blocks:
- ProtoNet:
Suggested Antigen Peptide Sequences for OR3A1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
P47881- Family:
-
- Belongs to the G-protein coupled receptor 1 family.
Function for OR3A1 Gene
Molecular function for OR3A1 Gene
- GENATLAS Biochemistry:
- olfactory receptor gene family 3,subfamily A,member 1,G protein coupled receptor superfamily,with odorant ligand
- UniProtKB/Swiss-Prot Function:
- Odorant receptor.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0004930 | G-protein coupled receptor activity | IEA | -- |
| GO:0004984 | olfactory receptor activity | IEA,IBA | -- |
Phenotypes for OR3A1 Gene
- GenomeRNAi human phenotypes for OR3A1:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for OR3A1
-
-
ViGene Biosciences lentiviral particle packaged cDNA for OR3A1 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for OR3A1 gene
- Search ViGene Biosciences for OR3A1
CRISPR Products
-
OriGene CRISPR knockouts for OR3A1
- genomics-online: gRNA clones - Search results for available OR3A1 gene related products
- Applied Biological Materials CRISPR for OR3A1
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for OR3A1
- GenScript: Design CRISPR guide RNA sequences for OR3A1
miRNA for OR3A1 Gene
- miRTarBase miRNAs that target OR3A1
miRNA Products
- Search ViGene Biosciences for OR3A1
Inhibitory RNA Products
- Origene shrna, RNAi, and sirna products in human, mouse, rat for OR3A1
- Browse OriGene Inhibitory RNA Products For OR3A1
- genomics-online: shRNA clones - Search results for available OR3A1 gene related products
-
ViGene Biosciences ready-to-package AAV shRNAs for OR3A1 gene
Clone Products
- Sino Biological Human cDNA Clone for OR3A1
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for OR3A1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for OR3A1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available OR3A1 gene related products
- orf clones - Search results for available OR3A1 gene related products
- Applied Biological Materials Clones for OR3A1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Cell Line Products
-
Horizon Cell Lines for OR3A1
-
ViGene Biosciences adenoviral particle packaged cDNA for OR3A1 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for OR3A1 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for OR3A1 gene
No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for OR3A1 Gene
Localization for OR3A1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for OR3A1 Gene
- Cell membrane; Multi-pass membrane protein.
| Compartment | Confidence |
|---|---|
| plasma membrane | 5 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005886 | plasma membrane | IEA,TAS | -- |
| GO:0016020 | membrane | IEA | -- |
| GO:0016021 | integral component of membrane | IEA,IBA | -- |
No data available for Subcellular locations from the Human Protein Atlas (HPA) for OR3A1 Gene
Pathways & Interactions for OR3A1 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Signaling by GPCR | ||
| 2 | Olfactory Signaling Pathway | ||
| 3 | Peptide ligand-binding receptors | ||
| 4 | GPCRs, Other | ||
Pathways by source for OR3A1 Gene
2 BioSystems pathways for OR3A1 Gene
4 Reactome pathways for OR3A1 Gene
1 KEGG pathway for OR3A1 Gene
Interacting Proteins for OR3A1 Gene
Selected Interacting proteins:
ENSP00000313803
P47881-OR3A1_HUMAN
for OR3A1 Gene via
STRING
IID
MINT
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0007165 | signal transduction | IEA,NAS | 8921386 |
| GO:0007186 | G-protein coupled receptor signaling pathway | TAS,IEA | -- |
| GO:0007608 | sensory perception of smell | IEA | -- |
| GO:0050896 | response to stimulus | IEA | -- |
| GO:0050911 | detection of chemical stimulus involved in sensory perception of smell | IEA | -- |
No data available for SIGNOR curated interactions for OR3A1 Gene
Transcripts for OR3A1 Gene
mRNA/cDNA for OR3A1 Gene
- (3) REFSEQ mRNAs :
- (2) Selected AceView cDNA sequences:
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
-
OriGene CRISPR knockouts for OR3A1
- genomics-online: gRNA clones - Search results for available OR3A1 gene related products
- Applied Biological Materials CRISPR for OR3A1
-
Vectors and viruses for KO, Activation, Repression, and more
-
Santa Cruz Biotechnology (SCBT) CRISPR for OR3A1
- GenScript: Design CRISPR guide RNA sequences for OR3A1
miRNA Products
- Search ViGene Biosciences for OR3A1
Inhibitory RNA Products
- Origene shrna, RNAi, and sirna products in human, mouse, rat for OR3A1
- Browse OriGene Inhibitory RNA Products For OR3A1
- genomics-online: shRNA clones - Search results for available OR3A1 gene related products
-
ViGene Biosciences ready-to-package AAV shRNAs for OR3A1 gene
Clone Products
- Sino Biological Human cDNA Clone for OR3A1
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for OR3A1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for OR3A1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available OR3A1 gene related products
- orf clones - Search results for available OR3A1 gene related products
- Applied Biological Materials Clones for OR3A1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for OR3A1 Gene
mRNA differential expression in normal tissues according to GTEx for OR3A1 Gene
This gene is overexpressed in Testis (x14.3).
NURSA nuclear receptor signaling pathways regulating expression of OR3A1 Gene:
OR3A1SOURCE GeneReport for Unigene cluster for OR3A1 Gene:
Hs.647410Primer Products
-
OriGene qPCR primer pairs for OR3A1
- genomics-online: primer clones - Search results for available OR3A1 gene related products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for OR3A1 Gene
Orthologs for OR3A1 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | LOC468152 33 |
|
||
| OR3A1 34 |
|
OneToOne | |||
| cow (Bos Taurus) |
Mammalia | OR3A1 33 34 |
|
||
| dog (Canis familiaris) |
Mammalia | LOC491212 33 |
|
||
| OR3A1 34 |
|
OneToOne | |||
| mouse (Mus musculus) |
Mammalia | Or3a1 51 Olfr410 34 |
|
OneToMany |
|
| Or3a1c 51 Olfr402 33 16 34 |
|
|
|||
| Or3a1b 51 Olfr401 34 |
|
OneToMany |
|
||
| Or3a15-ps 51 Olfr400-ps1 |
|
|
|||
| Or3a1d 51 Olfr411 |
|
|
|||
| rat (Rattus norvegicus) |
Mammalia | Olr1517 33 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | -- 34 |
|
OneToMany | |
| platypus (Ornithorhynchus anatinus) |
Mammalia | -- 34 |
|
ManyToMany | |
| chicken (Gallus gallus) |
Aves | -- 34 |
|
OneToMany | |
| lizard (Anolis carolinensis) |
Reptilia | -- 34 |
|
ManyToMany |
- Species where no ortholog for OR3A1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Paralogs for OR3A1 Gene
(456) SIMAP similar genes for OR3A1 Gene using alignment to 1 proteins:
- OR3A2
- OR3A3
- OR17-16
- OR17-15
- OR17-137
- OR3A4P
- OR5V1
- OR1F2P
- OR5B21
- OR5A2
- OR5AR1
- OR7D4
- OR5M11
- OR5M10
- OR5G3
- OR5F1
- OR2B8P
- OR2B11
- OR2A5
- OR2A2
- OR2A12
- OR1J4
- OR1F1
- OR1C1
- OR16-90
- OR13G1
- JCG4
- HSA10
- PJCG1
- OR9Q1
- OR9K2
- OR9I1
- OR8D1
- OR8B12
- OR8A1
- OR6M1
- OR5M1
- OR5B2
- OR5B12
- OR5A1
- OR4B1
- OR2Y1
- OR2W3
- OR2G3
- OR2A42
- OR2A25
- OR1N2
- OR1J2
- OR1J1
- OR1I1
- OR1F12
- OR16-89
- OR16-88
- OR16-37
- OR16-36
- OR10G7
- OR10G4
- OR10G2
- OLFR 42A
- OR9Q2
- OR6N1
- OR6C74
- OR2A14
- OR9G4
- OR8H3
- OR8B8
- OR8B3
- OR8B2
- OR7G2
- OR7A10
- OR6X1
- OR6N2
- OR6C70
- OR6C4
- OR6C3
- OR6C1
- OR5W2
- OR5M8
- OR5J2
- OR5AS1
- OR5AP2
- OR4Q3
- OR4Q2
- OR4F21
- OR4D2
- OR10A4
- OR2T10
- OR2K2
- OR2H5P
- OR2D3
- OR2D2
- OR2C3
- OR2C1
- OR2B6
- OR2B2
- OR2A1
- OR1L8
- OR1L6
- OR1G1
- OR1D2
- OR10J5
- OR10J4
- OR10G9
- OR10G3
- OR10C1
- OLFR 42B
- OR4F3
- OR8U9
- OR8K5
- OR8J2
- OR8I2
- OR8H1
- OR8D4
- OR7G3
- OR7E24
- OR7C1
- OR7A2P
- OR7A17
- OR6C75
- OR5T1
- OR5R1
- OR5M9
- OR5M3
- OR5L2
- OR5H6
- OR5D18
- OR5C1
- OR5AN1
- OR5AC2
- OR5AC1
- OR4M1
- OR4K2
- OR4K14
- OR4F5
- OR4F29
- OR4F17
- OR4F16
- OR4F15
- OR4E1
- OR4D9
- OR4D10
- OR4D1
- OR4C46
- OR4S2
- OR4C13
- OR1A1
- OR2T8
- OR2T33
- OR2T12
- OR2H2
- OR2H1
- OR2G6
- OR2B3
- OR2AP1
- OR1S1
- OR1M1
- OR1K1
- OR1E1
- OR17-130
- OR12D2
- OR10T2
- OR10Q1
- OR10G8
- OR10D4P
- OR10A5
- OR10A2
- HSA12
- FKSG35
- OR8G1
- OR7A5
- OR6B3
- OR13F1
- OR8U1
- OR8K3
- OR8H2
- OR8D2
- OR8B4
- OR7G1
- OR7-139
- OR6V1
- OR6S1
- OR6P1
- OR6F1
- OR6C76
- OR6B2
- OR6B1
- OR6A2
- OR5T3
- OR5P3
- OR5P2
- OR5L1
- OR5K4
- OR5H2
- OR5B3
- OR4X2
- OR4S1
- OR4N5
- OR4M2
- OR4K5
- OR4K3
- OR4K13
- OR4F4
- OR4E2
- OR4D11
- OR4C15
- OR5K1
- OR2V2
- OR2T35
- OR2T2
- OR2S2
- OR2M4
- OR2L5
- OR2L2
- OR2G2
- OR1S2
- OR1P1
- OR1L4
- OR1L3
- OR1E3P
- OR1E3
- OR1D4
- OR1B1
- OR13H1
- OR13C9
- OR12D3
- OR11L1
- OR10Z1
- OR10R3P
- OR10J1
- OR10D3
- OR10AG1
- OR10A7
- OR10A6
- 6M1-16
- OR8G5
- OR8G2
- tpcr110
- OR9A4
- OR8U8
- OR8K1
- OR8J3
- OR7D2
- OR7C2
- OR7-140
- OR6Y1
- OR6T1
- OR6C68
- OR6C6
- OR5T2
- OR5K3
- OR5K2
- OR5I1
- OR5H14
- OR5D16
- OR5D14
- OR5B17
- OR5AU1
- OR5AL1
- OR5AK3P
- OR4X1
- OR4N4
- OR4N2
- OR4L1
- OR4K17
- OR4K1
- OR4D5
- OR4C5
- OR4C3
- OR4A15
- OR8J1
- OR2V1
- OR1L1
- OR2W6P
- OR2W1
- OR2T27
- OR2T11
- OR2T1
- OR2M3
- OR2M2
- OR2L8
- OR2L3
- OR2J3
- OR2J2
- OR2J1
- OR2F1
- OR2A7
- OR1N1
- OR1E2
- OR1D5
- OR1A2
- OR14A2
- OR13C8
- OR13C2
- OR13A1
- OR11G2
- OR11A1
- OR10X1
- OR10S1
- OR10R2
- OR10P1
- OR10G6
- OR10A3
- OR2F2
- OR8S1
- OR6Q1
- OR6K3
- OR6C65
- OR6C2
- OR5H1
- OR5D13
- OR5AK2
- OR4K15
- OR4D6
- OR4C6
- OR4C12
- OR4A5
- OR2T7
- OR2Z1
- OR2T4
- OR2M7
- OR2M5
- OR2L13
- OR2J4P
- OR2I1P
- OR2AK2
- OR2AJ1
- OR2AG1
- OR2A4
- OR1Q1
- OR14A16
- OR13J1
- OR13C5
- OR10W1
- OR10V1
- OR10K1
- OR10J6P
- OR10J3
- OR10H4
- LOC441453
- OR5E1P
- olfr89
- OR7E5P
- OR6J1
- OR5H15
- OR5D3
- OR4P4
- OR4F6
- OR4A4P
- OR4C45
- OR2W5
- OR2AE1
- OR14L1P
- OR14I1
- OR13D1
- OR13C3
- OR10K2
- OR10H1
- OR10AD1
- OR2AG2
- OR9G9
- OR9G1
- OR9A2
- OR6K6
- OR6K2
- OR4A8P
- OR4A47
- OR2T6
- OR2T5
- OR2T34
- OR2T3
- OR2T29
- OR2AT4
- OR14J1
- OR14C36
- OR13C4
- OR11H7
- OR11H6
- OR10H5
- OR10H3
- PJCG2
- OR7E85P
- OR7E35P
- OR52E8
- OR4C16
- OR4C11
- OR4A16
- OR9A1P
- OR52E2
- OR10AC1P
- OR11H4
- OR10H2
- OR52Z1
- OR52E4
- OR11H12
- OR11H1
- OR56B3P
- OR56B1
- OR56A3
- OR52E6
- OR52E1
- OR14K1
- OR11H2
- OR52J3
- OR52D1
- OR52B2
- OR51D1
- OR56A4
- OR52E5
- OR11H13P
- OR56B2P
- OR52P1P
- OR52N5
- OR52B6
- OR51T1
- OR51M1
- OR51E2
- OR56A5
- OR56A1
- OR52L1
- OR52K2
- OR52K1
- OR7E18P
- OR56B4
- OR52M1
- OR52L2P
- OR52K3P
- OR52I2
- OR52I1
- OR51S1
- OR51L1
- OR51G2
- OR51B6
- OR52A1
- OR52W1
- OR52N2
- OR52N1
- OR52H1
- OR52B4
- OR52B1P
- OR52A5
- OR51G1
- OR51F2
- OR51F1
- OR51E1
- OR52N4
- OR51B5
- OR51V1
- OR51I1
- OR51H1P
- OR51B4
- OR51A2
- OR52R1
- OR51A4
- OR51B2
- OR51A7
- OR51A1P
Variants for OR3A1 Gene
| SNP ID | Clin | Chr 17 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000105503 | -- | 3,336,317(-) | A/T | upstream_transcript_variant | |
| rs1000109280 | -- | 3,320,370(-) | C/A | genic_upstream_transcript_variant, intron_variant | |
| rs1000363159 | -- | 3,313,862(-) | C/T | genic_upstream_transcript_variant, intron_variant | |
| rs1000392153 | -- | 3,319,280(-) | T/C | genic_upstream_transcript_variant, intron_variant | |
| rs1000477779 | -- | 3,336,131(-) | G/A | upstream_transcript_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2660206 | CNV | deletion | 23128226 |
| esv3639741 | CNV | gain | 21293372 |
| esv3892949 | CNV | loss | 25118596 |
| esv3892950 | CNV | loss | 25118596 |
| nsv1060926 | CNV | gain | 25217958 |
| nsv1065489 | CNV | gain | 25217958 |
| nsv457638 | CNV | gain | 19166990 |
| nsv457639 | CNV | gain | 19166990 |
| nsv470570 | CNV | gain | 18288195 |
| nsv574232 | CNV | gain | 21841781 |
| nsv574233 | CNV | gain | 21841781 |
| nsv574234 | CNV | gain | 21841781 |
| nsv574235 | CNV | loss | 21841781 |
| nsv827859 | CNV | gain | 20364138 |
Residual Variation Intolerance Score:
90% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
3.86;
58.86% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for OR3A1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- OR3A1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for OR3A1 Gene
Disorders for OR3A1 Gene
Additional Disease Information for OR3A1
No disorders were found for OR3A1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for OR3A1 Gene
Publications for OR3A1 Gene
- Olfactory receptor-encoding genes and pseudogenes are expressed in humans. (PMID: 8647456) Crowe ML … Connerton IF (Gene 1996) 2 3 4 58
- Sequence analysis in the olfactory receptor gene cluster on human chromosome 17: recombinatorial events affecting receptor diversity. (PMID: 8921386) Glusman G … Lancet D (Genomics 1996) 2 3 4 58
- The human olfactory receptor gene family. (PMID: 14983052) Malnic B … Buck LB (Proceedings of the National Academy of Sciences of the United States of America 2004) 3 4 58
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
- Sequence, structure, and evolution of a complete human olfactory receptor gene cluster. (PMID: 10673334) Glusman G … Lancet D (Genomics 2000) 3 4 58
Products for OR3A1 Gene
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Sources for OR3A1 Gene
- (1) GeneCards
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