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Aliases for MUTYH Gene

Aliases for MUTYH Gene

  • MutY Homolog 2 3 4
  • MYH 3 4 6
  • A/G-Specific Adenine DNA Glycosylase 3
  • MutY (E. Coli) Homolog 2
  • MutY Homolog (E. Coli) 2
  • EC 3.2.2.- 4
  • EC 3.2.2 63
  • HMYH 4

External Ids for MUTYH Gene

Previous GeneCards Identifiers for MUTYH Gene

  • GC01M045522
  • GC01M044795
  • GC01M045224
  • GC01M045208
  • GC01M045464
  • GC01M045567
  • GC01M045794
  • GC01M043906

Summaries for MUTYH Gene

Entrez Gene Summary for MUTYH Gene

  • This gene encodes a DNA glycosylase involved in oxidative DNA damage repair. The enzyme excises adenine bases from the DNA backbone at sites where adenine is inappropriately paired with guanine, cytosine, or 8-oxo-7,8-dihydroguanine, a major oxidatively damaged DNA lesion. The protein is localized to the nucleus and mitochondria. Mutations in this gene result in heritable predisposition to colon and stomach cancer. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

GeneCards Summary for MUTYH Gene

MUTYH (MutY Homolog) is a Protein Coding gene. Diseases associated with MUTYH include adenomas, multiple colorectal and mutyh-associated polyposis. Among its related pathways are Cell Cycle / Checkpoint Control and Cell Cycle / Checkpoint Control. GO annotations related to this gene include 4 iron, 4 sulfur cluster binding and MutSalpha complex binding.

UniProtKB/Swiss-Prot for MUTYH Gene

  • Involved in oxidative DNA damage repair. Initiates repair of A*oxoG to C*G by removing the inappropriately paired adenine base from the DNA backbone. Possesses both adenine and 2-OH-A DNA glycosylase activities.

Gene Wiki entry for MUTYH Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MUTYH Gene

Genomics for MUTYH Gene

Regulatory Elements for MUTYH Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for MUTYH Gene

Start:
45,329,163 bp from pter
End:
45,340,470 bp from pter
Size:
11,308 bases
Orientation:
Minus strand

Genomic View for MUTYH Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MUTYH Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MUTYH Gene

Proteins for MUTYH Gene

  • Protein details for MUTYH Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UIF7-MUTYH_HUMAN
    Recommended name:
    A/G-specific adenine DNA glycosylase
    Protein Accession:
    Q9UIF7
    Secondary Accessions:
    • D3DPZ4
    • Q15830
    • Q9UBP2
    • Q9UBS7
    • Q9UIF4
    • Q9UIF5
    • Q9UIF6

    Protein attributes for MUTYH Gene

    Size:
    546 amino acids
    Molecular mass:
    60069 Da
    Cofactor:
    Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Note=Binds 1 [4Fe-4S] cluster. The cluster does not appear to play a role in catalysis, but is probably involved in the proper positioning of the enzyme along the DNA strand.;
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAA89339.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAA89339.1; Type=Miscellaneous discrepancy; Note=Probable cloning artifact.; Evidence={ECO:0000305}; Sequence=BAA89345.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAA89345.1; Type=Miscellaneous discrepancy; Note=Probable cloning artifact.; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for MUTYH Gene

    Alternative splice isoforms for MUTYH Gene

neXtProt entry for MUTYH Gene

Proteomics data for MUTYH Gene at MOPED

Selected DME Specific Peptides for MUTYH Gene

Post-translational modifications for MUTYH Gene

  • Ubiquitination at Lys189 and Lys506
  • Modification sites at PhosphoSitePlus

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for MUTYH (MUTYH)

Domains for MUTYH Gene

Graphical View of Domain Structure for InterPro Entry

Q9UIF7

UniProtKB/Swiss-Prot:

MUTYH_HUMAN :
  • Q9UIF7
Domain:
  • Contains 1 nudix hydrolase domain.
Family:
  • Belongs to the Nth/MutY family.
genes like me logo Genes that share domains with MUTYH: view

No data available for Gene Families for MUTYH Gene

Function for MUTYH Gene

Molecular function for MUTYH Gene

GENATLAS Biochemistry: mutY E coli homolog,involved in the repair of oxidative DNA damage
UniProtKB/Swiss-Prot Function: Involved in oxidative DNA damage repair. Initiates repair of A*oxoG to C*G by removing the inappropriately paired adenine base from the DNA backbone. Possesses both adenine and 2-OH-A DNA glycosylase activities.

Enzyme Numbers (IUBMB) for MUTYH Gene

Gene Ontology (GO) - Molecular Function for MUTYH Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003824 catalytic activity --
GO:0005515 protein binding IPI 11801590
GO:0016787 hydrolase activity --
GO:0016798 hydrolase activity, acting on glycosyl bonds IEA --
GO:0032405 NOT MutLalpha complex binding IDA 11801590
genes like me logo Genes that share ontologies with MUTYH: view
genes like me logo Genes that share phenotypes with MUTYH: view

Animal Models for MUTYH Gene

MGI Knock Outs for MUTYH:

Animal Model Products

CRISPR Products

No data available for miRNA , Transcription Factor Targeting and HOMER Transcription for MUTYH Gene

Localization for MUTYH Gene

Subcellular locations from UniProtKB/Swiss-Prot for MUTYH Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MUTYH Gene COMPARTMENTS Subcellular localization image for MUTYH gene
Compartment Confidence
nucleus 5
mitochondrion 2

Gene Ontology (GO) - Cellular Components for MUTYH Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
GO:0005654 nucleoplasm TAS --
GO:0005739 mitochondrion IEA --
genes like me logo Genes that share ontologies with MUTYH: view

Pathways for MUTYH Gene

genes like me logo Genes that share pathways with MUTYH: view

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

Gene Ontology (GO) - Biological Process for MUTYH Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006281 DNA repair TAS --
GO:0006284 base-excision repair TAS --
GO:0006285 base-excision repair, AP site formation TAS --
GO:0006298 mismatch repair TAS 7823963
GO:0008152 metabolic process --
genes like me logo Genes that share ontologies with MUTYH: view

Compounds for MUTYH Gene

(10) Novoseek inferred chemical compound relationships for MUTYH Gene

Compound -log(P) Hits PubMed IDs
af/ap 90.9 5
8-oxo-dgtp 81.2 3
8-oxoguanine 80.1 6
8-hydroxyguanine 79.7 5
adenine 75.8 19

(2) PharmGKB related drug/compound annotations for MUTYH Gene

Drug/compound Annotation
cisplatin CA
cyclophosphamide CA
genes like me logo Genes that share compounds with MUTYH: view

Transcripts for MUTYH Gene

Unigene Clusters for MUTYH Gene

MutY homolog (E. coli):
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MUTYH

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MUTYH Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8a · 8b ^ 9 ^ 10a · 10b · 10c ^ 11 ^ 12a · 12b · 12c · 12d ^ 13a · 13b ^ 14 ^ 15 ^ 16
SP1:
SP2: -
SP3: -
SP4:
SP5:
SP6:
SP7: -
SP8: -
SP9: -
SP10:

Relevant External Links for MUTYH Gene

GeneLoc Exon Structure for
MUTYH
ECgene alternative splicing isoforms for
MUTYH

Expression for MUTYH Gene

mRNA expression in normal human tissues for MUTYH Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for MUTYH Gene

SOURCE GeneReport for Unigene cluster for MUTYH Gene Hs.271353

genes like me logo Genes that share expressions with MUTYH: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for MUTYH Gene

Orthologs for MUTYH Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for MUTYH Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia MUTYH 35
  • 99.5 (n)
  • 99.25 (a)
MUTYH 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia MUTYH 35
  • 86.03 (n)
  • 82.31 (a)
MUTYH 36
  • 81 (a)
OneToOne
dog
(Canis familiaris)
Mammalia MUTYH 35
  • 84.65 (n)
  • 81.02 (a)
MUTYH 36
  • 68 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mutyh 35
  • 81.72 (n)
  • 78.3 (a)
Mutyh 16
Mutyh 36
  • 77 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia MUTYH 36
  • 71 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia MUTYH 36
  • 64 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Mutyh 35
  • 81.62 (n)
  • 77.67 (a)
chicken
(Gallus gallus)
Aves MUTYH 35
  • 64.06 (n)
  • 61.39 (a)
MUTYH 36
  • 55 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia MUTYH 36
  • 62 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia mutyh 35
  • 57.81 (n)
  • 58.17 (a)
zebrafish
(Danio rerio)
Actinopterygii mutyh 35
  • 55.48 (n)
  • 52.8 (a)
mutyh 36
  • 47 (a)
OneToOne
thale cress
(Arabidopsis thaliana)
eudicotyledons AT4G12740 35
  • 55.1 (n)
  • 55.31 (a)
rice
(Oryza sativa)
Liliopsida Os12g0211400 35
  • 52.2 (n)
  • 47.38 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes myh1 35
  • 46.67 (n)
  • 40.49 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 50 (a)
OneToOne
Species with no ortholog for MUTYH:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MUTYH Gene

ENSEMBL:
Gene Tree for MUTYH (if available)
TreeFam:
Gene Tree for MUTYH (if available)

Paralogs for MUTYH Gene

genes like me logo Genes that share paralogs with MUTYH: view

No data available for Paralogs for MUTYH Gene

Variants for MUTYH Gene

Sequence variations from dbSNP and Humsavar for MUTYH Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1140507 -- 45,333,454(-) TAAGC(C/T)GGTAC missense, reference, utr-variant-5-prime
rs3219475 -- 45,337,445(-) gcgcc(A/G)tggct intron-variant
rs3219476 -- 45,336,998(-) GGGAT(G/T)TGATT intron-variant
rs3219477 -- 45,336,650(-) tctta(C/T)aggtt intron-variant
rs3219479 -- 45,336,471(-) aatgt(C/G)atcag intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MUTYH Gene

Variant ID Type Subtype PubMed ID
esv1314250 CNV Insertion 17803354
esv2750837 CNV Loss 17911159

Relevant External Links for MUTYH Gene

HapMap Linkage Disequilibrium report
MUTYH
Human Gene Mutation Database (HGMD)
MUTYH
Locus Specific Mutation Databases (LSDB)
MUTYH

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MUTYH Gene

Disorders for MUTYH Gene

(3) OMIM Diseases for MUTYH Gene (604933)

UniProtKB/Swiss-Prot

MUTYH_HUMAN
  • Familial adenomatous polyposis 2 (FAP2) [MIM:608456]: A condition characterized by the development of multiple colorectal adenomatous polyps, benign neoplasms derived from glandular epithelium. Some affected individuals may develop colorectal carcinoma. {ECO:0000269 PubMed:11818965, ECO:0000269 PubMed:12606733, ECO:0000269 PubMed:12853198, ECO:0000269 PubMed:15366000, ECO:0000269 PubMed:18091433, ECO:0000269 PubMed:19953527}. Note=The disease is caused by mutations affecting the gene represented in this entry.
  • Gastric cancer (GASC) [MIM:613659]: A malignant disease which starts in the stomach, can spread to the esophagus or the small intestine, and can extend through the stomach wall to nearby lymph nodes and organs. It also can metastasize to other parts of the body. The term gastric cancer or gastric carcinoma refers to adenocarcinoma of the stomach that accounts for most of all gastric malignant tumors. Two main histologic types are recognized, diffuse type and intestinal type carcinomas. Diffuse tumors are poorly differentiated infiltrating lesions, resulting in thickening of the stomach. In contrast, intestinal tumors are usually exophytic, often ulcerating, and associated with intestinal metaplasia of the stomach, most often observed in sporadic disease. {ECO:0000269 PubMed:15273732}. Note=The gene represented in this entry may be involved in disease pathogenesis. Somatic mutations contribute to the development of a sub-set of sporadic gastric cancers in carriers of Helicobacter pylori (PubMed:15273732). {ECO:0000269 PubMed:15273732}.

(4) University of Copenhagen DISEASES for MUTYH Gene

(21) Novoseek inferred disease relationships for MUTYH Gene

Disease -log(P) Hits PubMed IDs
polyposis 93.1 67
familial adenomatous polyposis 89.8 37
adenoma 81.2 56
colorectal cancer 76.8 56
adenomatous polyps 73 3

Relevant External Links for MUTYH

Genetic Association Database (GAD)
MUTYH
Human Genome Epidemiology (HuGE) Navigator
MUTYH
genes like me logo Genes that share disorders with MUTYH: view

Publications for MUTYH Gene

  1. Identification of human MutY homolog (hMYH) as a repair enzyme for 2- hydroxyadenine in DNA and detection of multiple forms of hMYH located in nuclei and mitochondria. (PMID: 10684930) Ohtsubo T. … Nakabeppu Y. (Nucleic Acids Res. 2000) 2 3 4 23
  2. Germline MUTYH (MYH) mutations in Portuguese individuals with multiple colorectal adenomas. (PMID: 15366000) Isidro G. … Boavida M.G. (Hum. Mutat. 2004) 3 4 23 48
  3. Heterogeneous molecular mechanisms underlie attenuated familial adenomatous polyposis. (PMID: 18091433) Cattaneo F. … Ranzani G.N. (Genet. Med. 2007) 3 4 23 48
  4. Germline mutations of the MYH gene in Korean patients with multiple colorectal adenomas. (PMID: 17703316) Kim D.W. … Park J.G. (Int J Colorectal Dis 2007) 3 23 48
  5. The thorough screening of the MUTYH gene in a large French cohort of sporadic colorectal cancers. (PMID: 17931073) KA1ry S. … BAczieau S. (Genet. Test. 2007) 3 23 48

Products for MUTYH Gene

Sources for MUTYH Gene

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