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Aliases for SMAD2 Gene

Aliases for SMAD2 Gene

  • SMAD Family Member 2 2 3 4 5
  • MAD Homolog 2 3 4
  • HSMAD2 3 4
  • JV18-1 3 4
  • HMAD-2 3 4
  • MADH2 3 4
  • MADR2 3 4
  • MAD, Mothers Against Decapentaplegic Homolog 2 (Drosophila) 2
  • SMAD, Mothers Against DPP Homolog 2 (Drosophila) 2
  • Mothers Against Decapentaplegic Homolog 2 3
  • SMAD, Mothers Against DPP Homolog 2 3
  • Sma- And Mad-Related Protein 2 3
  • Mothers Against DPP Homolog 2 4
  • Mother Against DPP Homolog 2 3
  • Mad-Related Protein 2 4
  • SMAD 2 4
  • Smad2 4
  • JV18 3

External Ids for SMAD2 Gene

Previous HGNC Symbols for SMAD2 Gene

  • MADH2

Previous GeneCards Identifiers for SMAD2 Gene

  • GC18M043620
  • GC18M043621
  • GC18M045357
  • GC18M042208

Summaries for SMAD2 Gene

Entrez Gene Summary for SMAD2 Gene

  • The protein encoded by this gene belongs to the SMAD, a family of proteins similar to the gene products of the Drosophila gene 'mothers against decapentaplegic' (Mad) and the C. elegans gene Sma. SMAD proteins are signal transducers and transcriptional modulators that mediate multiple signaling pathways. This protein mediates the signal of the transforming growth factor (TGF)-beta, and thus regulates multiple cellular processes, such as cell proliferation, apoptosis, and differentiation. This protein is recruited to the TGF-beta receptors through its interaction with the SMAD anchor for receptor activation (SARA) protein. In response to TGF-beta signal, this protein is phosphorylated by the TGF-beta receptors. The phosphorylation induces the dissociation of this protein with SARA and the association with the family member SMAD4. The association with SMAD4 is important for the translocation of this protein into the nucleus, where it binds to target promoters and forms a transcription repressor complex with other cofactors. This protein can also be phosphorylated by activin type 1 receptor kinase, and mediates the signal from the activin. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, May 2012]

GeneCards Summary for SMAD2 Gene

SMAD2 (SMAD Family Member 2) is a Protein Coding gene. Diseases associated with SMAD2 include Keloids and Ureteral Disease. Among its related pathways are Toll-like receptor signaling pathway and TGF-beta Receptor Signaling (WikiPathways). Gene Ontology (GO) annotations related to this gene include DNA binding transcription factor activity and transcription factor binding. An important paralog of this gene is SMAD3.

UniProtKB/Swiss-Prot for SMAD2 Gene

  • Receptor-regulated SMAD (R-SMAD) that is an intracellular signal transducer and transcriptional modulator activated by TGF-beta (transforming growth factor) and activin type 1 receptor kinases. Binds the TRE element in the promoter region of many genes that are regulated by TGF-beta and, on formation of the SMAD2/SMAD4 complex, activates transcription. May act as a tumor suppressor in colorectal carcinoma. Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator.

Gene Wiki entry for SMAD2 Gene

Additional gene information for SMAD2 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SMAD2 Gene

Genomics for SMAD2 Gene

GeneHancer (GH) Regulatory Elements for SMAD2 Gene

Promoters and enhancers for SMAD2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I047928 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.6 619 5 PKNOX1 CLOCK FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF766 ZNF207 ZNF143 SMAD2 MTCO2P2 ENSG00000279366
GH18I048872 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 13.4 -942.4 -942370 2 ZFP64 FEZF1 ZNF213 ZNF548 FOS SP3 ZC3H11A REST ZNF592 ZNF610 RPL17 LOC100129878 SMAD2 CTIF ZBTB7C SMAD7 LOC105372105
GH18I048001 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 13.4 -72.4 -72393 3.4 SIN3A FEZF1 BRCA1 GLIS2 ZNF416 ZNF143 FOS DEK REST ZNF623 SMAD2 LOC105372101 GC18P048133
GH18I048901 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10 -971.4 -971359 2.3 HDGF SMAD1 FOXA2 MLX ARID4B FEZF1 DMAP1 ZNF2 ZNF213 ZNF416 RPL17 LOC100129878 SMAD2 SMAD7 LOC105372105
GH18I048007 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -77.1 -77068 1.5 CTCF KLF1 ZNF449 ZFP64 SIN3A ZIC2 ZNF335 ZFHX2 GLIS2 POLR2A SMAD2 LOC105372101 GC18P048133
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SMAD2 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SMAD2 gene promoter:

Genomic Locations for SMAD2 Gene

Genomic Locations for SMAD2 Gene
chr18:47,808,957-47,931,193
(GRCh38/hg38)
Size:
122,237 bases
Orientation:
Minus strand
chr18:45,357,922-45,457,515
(GRCh37/hg19)

Genomic View for SMAD2 Gene

Genes around SMAD2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SMAD2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SMAD2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SMAD2 Gene

Proteins for SMAD2 Gene

  • Protein details for SMAD2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q15796-SMAD2_HUMAN
    Recommended name:
    Mothers against decapentaplegic homolog 2
    Protein Accession:
    Q15796

    Protein attributes for SMAD2 Gene

    Size:
    467 amino acids
    Molecular mass:
    52306 Da
    Quaternary structure:
    • Monomer; the absence of TGF-beta. Heterodimer; in the presence of TGF-beta. Forms a heterodimer with co-SMAD, SMAD4, in the nucleus to form the transactivation complex SMAD2/SMAD4. Interacts with AIP1, HGS, PML and WWP1 (By similarity). Interacts with NEDD4L in response to TGF-beta (By similarity). Found in a complex with SMAD3 and TRIM33 upon addition of TGF-beta. Interacts with ACVR1B, SMAD3 and TRIM33. Interacts (via the MH2 domain) with ZFYVE9; may form trimers with the SMAD4 co-SMAD. Interacts with FOXH1, homeobox protein TGIF, PEBP2-alpha subunit, CREB-binding protein (CBP), EP300, SKI and SNW1. Interacts with SNON; when phosphorylated at Ser-465/467. Interacts with SKOR1 and SKOR2. Interacts with PRDM16. Interacts (via MH2 domain) with LEMD3. Interacts with RBPMS. Interacts with WWP1. Interacts (dephosphorylated form, via the MH1 and MH2 domains) with RANBP3 (via its C-terminal R domain); the interaction results in the export of dephosphorylated SMAD3 out of the nucleus and termination of the TGF-beta signaling. Interacts with PDPK1 (via PH domain). Interacts with DAB2; the interactions are enhanced upon TGF-beta stimulation. Interacts with USP15. Interacts with PPP5C. Interacts with ZNF580. Interacts with LDLRAD4 (via the SMAD interaction motif). Interacts (via MH2 domain) with PMEPA1 (via the SMAD interaction motif). Interacts with ZFHX3. Interacts with ZNF451 (PubMed:24324267). Identified in a complex that contains at least ZNF451, SMAD2, SMAD3 and SMAD4 (PubMed:24324267). Interacts weakly with ZNF8 (By similarity). Interacts (when phosphorylated) with RNF111; RNF111 acts as an enhancer of the transcriptional responses by mediating ubiquitination and degradation of SMAD2 inhibitors (By similarity).

    Three dimensional structures from OCA and Proteopedia for SMAD2 Gene

    Alternative splice isoforms for SMAD2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for SMAD2 Gene

Post-translational modifications for SMAD2 Gene

  • Acetylated on Lys-19 by coactivators in response to TGF-beta signaling, which increases transcriptional activity. Isoform short: Acetylation increases DNA binding activity in vitro and enhances its association with target promoters in vivo. Acetylation in the nucleus by EP300 is enhanced by TGF-beta.
  • In response to TGF-beta, ubiquitinated by NEDD4L; which promotes its degradation. Monoubiquitinated, leading to prevent DNA-binding (By similarity). Deubiquitination by USP15 alleviates inhibition and promotes activation of TGF-beta target genes (PubMed:21947082). Ubiquitinated by RNF111, leading to its degradation: only SMAD2 proteins that are in use are targeted by RNF111, RNF111 playing a key role in activating SMAD2 and regulating its turnover (By similarity).
  • Phosphorylated on one or several of Thr-220, Ser-245, Ser-250, and Ser-255. In response to TGF-beta, phosphorylated on Ser-465/467 by TGF-beta and activin type 1 receptor kinases. TGF-beta-induced Ser-465/467 phosphorylation declines progressively in a KMT5A-dependent manner. Able to interact with SMURF2 when phosphorylated on Ser-465/467, recruiting other proteins, such as SNON, for degradation. In response to decorin, the naturally occurring inhibitor of TGF-beta signaling, phosphorylated on Ser-240 by CaMK2. Phosphorylated by MAPK3 upon EGF stimulation; which increases transcriptional activity and stability, and is blocked by calmodulin. Phosphorylated by PDPK1.

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for SMAD2 (SMAD2)
  • Abcam antibodies for SMAD2

No data available for DME Specific Peptides for SMAD2 Gene

Domains & Families for SMAD2 Gene

Gene Families for SMAD2 Gene

HGNC:
Human Protein Atlas (HPA):
  • Cancer-related genes
  • Plasma proteins
  • Predicted intracellular proteins
  • Predicted membrane proteins
  • Transcription factors

Graphical View of Domain Structure for InterPro Entry

Q15796

UniProtKB/Swiss-Prot:

SMAD2_HUMAN :
  • Belongs to the dwarfin/SMAD family.
Family:
  • Belongs to the dwarfin/SMAD family.
genes like me logo Genes that share domains with SMAD2: view

Function for SMAD2 Gene

Molecular function for SMAD2 Gene

UniProtKB/Swiss-Prot Function:
Receptor-regulated SMAD (R-SMAD) that is an intracellular signal transducer and transcriptional modulator activated by TGF-beta (transforming growth factor) and activin type 1 receptor kinases. Binds the TRE element in the promoter region of many genes that are regulated by TGF-beta and, on formation of the SMAD2/SMAD4 complex, activates transcription. May act as a tumor suppressor in colorectal carcinoma. Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator.

Phenotypes From GWAS Catalog for SMAD2 Gene

Gene Ontology (GO) - Molecular Function for SMAD2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA 9389648
GO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA 9389648
GO:0003677 contributes_to DNA binding IDA 9389648
GO:0003682 chromatin binding IEA --
GO:0003690 double-stranded DNA binding ISS --
genes like me logo Genes that share ontologies with SMAD2: view
genes like me logo Genes that share phenotypes with SMAD2: view

Animal Models for SMAD2 Gene

MGI Knock Outs for SMAD2:

miRNA for SMAD2 Gene

miRTarBase miRNAs that target SMAD2
Targeted motifs for SMAD2 Gene
HOMER Transcription Factor Regulatory Elements motif SMAD2
  • Consensus sequence: CTGTCTGG Submotif: canonical Cell Type: ES GEO ID: GSE29422

Clone Products

  • Addgene plasmids for SMAD2

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology and Transcription Factor Targets for SMAD2 Gene

Localization for SMAD2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for SMAD2 Gene

Cytoplasm. Nucleus. Note=Cytoplasmic and nuclear in the absence of TGF-beta. On TGF-beta stimulation, migrates to the nucleus when complexed with SMAD4 (PubMed:9865696). On dephosphorylation by phosphatase PPM1A, released from the SMAD2/SMAD4 complex, and exported out of the nucleus by interaction with RANBP1 (PubMed:16751101, PubMed:19289081). {ECO:0000269 PubMed:16751101, ECO:0000269 PubMed:19289081, ECO:0000269 PubMed:9865696}.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SMAD2 gene
Compartment Confidence
nucleus 5
cytosol 5
extracellular 3
plasma membrane 2
cytoskeleton 2
mitochondrion 2
peroxisome 1
endoplasmic reticulum 1
endosome 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (3)
  • Nucleoli (3)
  • Nucleus (3)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for SMAD2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000790 nuclear chromatin IDA 21828274
GO:0005622 intracellular IEA --
GO:0005634 nucleus IDA,IEA 8980228
GO:0005654 nucleoplasm TAS --
GO:0005667 transcription factor complex IDA 17438144
genes like me logo Genes that share ontologies with SMAD2: view

Pathways & Interactions for SMAD2 Gene

genes like me logo Genes that share pathways with SMAD2: view

SIGNOR curated interactions for SMAD2 Gene

Gene Ontology (GO) - Biological Process for SMAD2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000122 negative regulation of transcription by RNA polymerase II TAS --
GO:0001657 ureteric bud development IEA --
GO:0001701 in utero embryonic development IEA --
GO:0001706 endoderm formation IEA --
GO:0001707 mesoderm formation ISS --
genes like me logo Genes that share ontologies with SMAD2: view

Drugs & Compounds for SMAD2 Gene

(27) Drugs for SMAD2 Gene - From: DrugBank, ApexBio, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Pirfenidone Approved, Investigational Pharma TGF-β production inhibitor, Antifibrotic agent; regulates cytokine levels in vivo 65
phosphoserine Experimental Pharma Target 0
LDN193189 Hydrochloride Pharma ALK inhibitor,potent and selective 0
LY364947 Pharma 0
RepSox Pharma ALK5 inhibitor,potent and selective, Potent and selective inhibitor of TGF-betaRI 0

(11) Additional Compounds for SMAD2 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs

(4) ApexBio Compounds for SMAD2 Gene

Compound Action Cas Number
LDN193189 Hydrochloride ALK inhibitor,potent and selective 1062368-62-0
LY364947 396129-53-6
Pirfenidone TGF-β production inhibitor 53179-13-8
RepSox ALK5 inhibitor,potent and selective 446859-33-2
genes like me logo Genes that share compounds with SMAD2: view

Drug Products

Transcripts for SMAD2 Gene

Unigene Clusters for SMAD2 Gene

SMAD family member 2:
Representative Sequences:

Clone Products

  • Addgene plasmids for SMAD2

Alternative Splicing Database (ASD) splice patterns (SP) for SMAD2 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b · 2c · 2d ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10a · 10b · 10c ^ 11a · 11b · 11c ^ 12 ^ 13 ^ 14 ^
SP1: - - - - - - - - - - -
SP2: - - - - - - - -
SP3: - - - - - - - - - - - - -
SP4: - -
SP5: - -
SP6: - - - - - - - -
SP7: - - - -
SP8: - - - - - - - -
SP9: - - - - - - - -
SP10: - - - - -
SP11: - - - - - -
SP12:
SP13: -

ExUns: 15 ^ 16 ^ 17a · 17b
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:

Relevant External Links for SMAD2 Gene

GeneLoc Exon Structure for
SMAD2
ECgene alternative splicing isoforms for
SMAD2

Expression for SMAD2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SMAD2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for SMAD2 Gene

This gene is overexpressed in Breast (27.7) and Peripheral blood mononuclear cells (9.2).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for SMAD2 Gene



Protein tissue co-expression partners for SMAD2 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of SMAD2 Gene:

SMAD2

SOURCE GeneReport for Unigene cluster for SMAD2 Gene:

Hs.12253

mRNA Expression by UniProt/SwissProt for SMAD2 Gene:

Q15796-SMAD2_HUMAN
Tissue specificity: Expressed at high levels in skeletal muscle, endothelial cells, heart and placenta.

Evidence on tissue expression from TISSUES for SMAD2 Gene

  • Kidney(4.6)
  • Pancreas(4.4)
  • Spleen(4.4)
  • Nervous system(4)
  • Muscle(3.4)
  • Lung(3.2)
  • Heart(3.1)
  • Skin(2.9)
  • Blood(2.8)
  • Liver(2.8)
  • Intestine(2.7)
  • Bone marrow(2.2)
  • Eye(2.2)
  • Lymph node(2.2)
  • Stomach(2.1)
  • Thyroid gland(2.1)
genes like me logo Genes that share expression patterns with SMAD2: view

No data available for mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for SMAD2 Gene

Orthologs for SMAD2 Gene

This gene was present in the common ancestor of animals.

Orthologs for SMAD2 Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia SMAD2 34
  • 100 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia SMAD2 34 33
  • 99.71 (n)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SMAD2 34
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SMAD2 33 34
  • 94.79 (n)
dog
(Canis familiaris)
Mammalia SMAD2 33 34
  • 93.65 (n)
mouse
(Mus musculus)
Mammalia Smad2 16 34 33
  • 92.22 (n)
rat
(Rattus norvegicus)
Mammalia Smad2 33
  • 91.36 (n)
chicken
(Gallus gallus)
Aves -- 34
  • 99 (a)
OneToMany
MADH2 34
  • 99 (a)
OneToMany
SMAD2 33
  • 85.3 (n)
lizard
(Anolis carolinensis)
Reptilia SMAD2 34
  • 74 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia smad2 33
  • 83.3 (n)
Str.11098 33
African clawed frog
(Xenopus laevis)
Amphibia Xl.85 33
zebrafish
(Danio rerio)
Actinopterygii smad2 34 33
  • 79.73 (n)
OneToOne
madh2 33
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.3591 33
fruit fly
(Drosophila melanogaster)
Insecta Smox 34
  • 62 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea sma-2 34
  • 50 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 68 (a)
ManyToMany
-- 34
  • 51 (a)
ManyToMany
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.560 33
Species where no ortholog for SMAD2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for SMAD2 Gene

ENSEMBL:
Gene Tree for SMAD2 (if available)
TreeFam:
Gene Tree for SMAD2 (if available)

Paralogs for SMAD2 Gene

Paralogs for SMAD2 Gene

(6) SIMAP similar genes for SMAD2 Gene using alignment to 7 proteins:

genes like me logo Genes that share paralogs with SMAD2: view

Variants for SMAD2 Gene

Sequence variations from dbSNP and Humsavar for SMAD2 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs397509416 uncertain-significance, Variant of unknown significance 47,851,273(-) C/T genic_downstream_transcript_variant, splice_donor_variant
rs797044882 pathogenic, Inborn genetic diseases 47,848,537(-) C/G coding_sequence_variant, genic_downstream_transcript_variant, missense_variant
VAR_011375 A colorectal carcinoma sample p.Arg133Cys
VAR_011377 A colorectal carcinoma sample p.Leu440Arg
VAR_011378 A colorectal carcinoma sample p.Pro445His

Structural Variations from Database of Genomic Variants (DGV) for SMAD2 Gene

Variant ID Type Subtype PubMed ID
dgv1593n106 CNV deletion 24896259
dgv3347n100 CNV loss 25217958
dgv3348n100 CNV gain 25217958
dgv3349n100 CNV loss 25217958
dgv3350n100 CNV loss 25217958
dgv3351n100 CNV loss 25217958
dgv3352n100 CNV loss 25217958
dgv3353n100 CNV loss 25217958
dgv3354n100 CNV loss 25217958
dgv3355n100 CNV loss 25217958
esv1323042 CNV insertion 17803354
esv2627568 CNV deletion 19546169
esv2667321 CNV deletion 23128226
esv2717053 CNV deletion 23290073
esv3325292 CNV insertion 20981092
esv3555341 CNV deletion 23714750
nsv1057072 CNV loss 25217958
nsv1057722 CNV gain 25217958
nsv1062318 CNV gain+loss 25217958
nsv1072265 CNV deletion 25765185
nsv1072266 CNV deletion 25765185
nsv1112727 CNV deletion 24896259
nsv1127630 CNV deletion 24896259
nsv1146886 CNV deletion 26484159
nsv132205 CNV deletion 16902084
nsv2288 CNV insertion 18451855
nsv961048 CNV duplication 23825009

Variation tolerance for SMAD2 Gene

Residual Variation Intolerance Score: 14.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.15; 3.43% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for SMAD2 Gene

Human Gene Mutation Database (HGMD)
SMAD2
SNPedia medical, phenotypic, and genealogical associations of SNPs for
SMAD2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for SMAD2 Gene

Disorders for SMAD2 Gene

MalaCards: The human disease database

(25) MalaCards diseases for SMAD2 Gene - From: HGMD, DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
keloids
  • keloid disorder
ureteral disease
  • ureteral disorders
hypertrophic scars
  • scars hypertrophic
buschke-ollendorff syndrome
  • bos
melorheostosis
- elite association - COSMIC cancer census association via MalaCards
Search SMAD2 in MalaCards View complete list of genes associated with diseases

Additional Disease Information for SMAD2

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
genes like me logo Genes that share disorders with SMAD2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SMAD2 Gene

Publications for SMAD2 Gene

  1. Decorin suppresses transforming growth factor-beta-induced expression of plasminogen activator inhibitor-1 in human mesangial cells through a mechanism that involves Ca2+-dependent phosphorylation of Smad2 at serine-240. (PMID: 11879191) Abdel-Wahab N … Chantry A (The Biochemical journal 2002) 3 4 22 58
  2. Modulation of Smad2-mediated signaling by extracellular signal-regulated kinase. (PMID: 12193595) Funaba M … Mathews LS (The Journal of biological chemistry 2002) 3 4 22 58
  3. Alternatively spliced variant of Smad2 lacking exon 3. Comparison with wild-type Smad2 and Smad3. (PMID: 9873005) Yagi K … Miyazono K (The Journal of biological chemistry 1999) 3 4 22 58
  4. Characterization of the MADH2/Smad2 gene, a human Mad homolog responsible for the transforming growth factor-beta and activin signal transduction pathway. (PMID: 9503010) Takenoshita S … Hagiwara K (Genomics 1998) 3 4 22 58
  5. SARA, a FYVE domain protein that recruits Smad2 to the TGFbeta receptor. (PMID: 9865696) Tsukazaki T … Wrana JL (Cell 1998) 3 4 22 58

Products for SMAD2 Gene

  • Addgene plasmids for SMAD2

Sources for SMAD2 Gene