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Aliases for OR52E5 Gene

Aliases for OR52E5 Gene

  • Olfactory Receptor, Family 52, Subfamily E, Member 5 2 3
  • Olfactory Receptor OR11-56 Pseudogene 3
  • OR11-56 3

External Ids for OR52E5 Gene

Summaries for OR52E5 Gene

Entrez Gene Summary for OR52E5 Gene

  • Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

GeneCards Summary for OR52E5 Gene

OR52E5 (Olfactory Receptor, Family 52, Subfamily E, Member 5) is a Pseudogene. Among its related pathways are Signaling by GPCR and Signaling by GPCR. GO annotations related to this gene include G-protein coupled receptor activity and olfactory receptor activity.

UniProtKB/Swiss-Prot for OR52E5 Gene

  • Odorant receptor.

Gene Wiki entry for OR52E5 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for OR52E5 Gene

Genomics for OR52E5 Gene

Genomic Location for OR52E5 Gene

Start:
5,900,777 bp from pter
End:
5,902,090 bp from pter
Size:
1,314 bases
Orientation:
Plus strand

Genomic View for OR52E5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for OR52E5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for OR52E5 Gene

No data available for Regulatory Elements for OR52E5 Gene

Proteins for OR52E5 Gene

  • Protein details for OR52E5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NH55-O52E5_HUMAN
    Recommended name:
    Olfactory receptor 52E5
    Protein Accession:
    Q8NH55
    Secondary Accessions:

    Protein attributes for OR52E5 Gene

    Size:
    327 amino acids
    Molecular mass:
    36851 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC05782.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for OR52E5 Gene

Proteomics data for OR52E5 Gene at MOPED

Post-translational modifications for OR52E5 Gene

Other Protein References for OR52E5 Gene

ENSEMBL proteins:
Reactome Protein details:

No data available for DME Specific Peptides for OR52E5 Gene

Domains for OR52E5 Gene

Gene Families for OR52E5 Gene

HGNC:
  • OR52 :GPCR / Class A : Olfactory receptors

Protein Domains for OR52E5 Gene

UniProtKB/Swiss-Prot:

O52E5_HUMAN
Family:
  • Belongs to the G-protein coupled receptor 1 family.:
    • Q8NH55
genes like me logo Genes that share domains with OR52E5: view

Function for OR52E5 Gene

Molecular function for OR52E5 Gene

UniProtKB/Swiss-Prot Function: Odorant receptor.

Gene Ontology (GO) - Molecular Function for OR52E5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0004984 olfactory receptor activity IEA --
genes like me logo Genes that share ontologies with OR52E5: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for OR52E5 Gene

Localization for OR52E5 Gene

Subcellular locations from UniProtKB/Swiss-Prot for OR52E5 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for OR52E5 Gene COMPARTMENTS Subcellular localization image for OR52E5 gene
Compartment Confidence
plasma membrane 5

Gene Ontology (GO) - Cellular Components for OR52E5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with OR52E5: view

Pathways for OR52E5 Gene

genes like me logo Genes that share pathways with OR52E5: view

Pathways by source for OR52E5 Gene

Interacting Proteins for OR52E5 Gene

Gene Ontology (GO) - Biological Process for OR52E5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA --
genes like me logo Genes that share ontologies with OR52E5: view

Transcripts for OR52E5 Gene

mRNA/cDNA for OR52E5 Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for OR52E5 Gene

No ASD Table

Relevant External Links for OR52E5 Gene

GeneLoc Exon Structure for
OR52E5
ECgene alternative splicing isoforms for
OR52E5

Expression for OR52E5 Gene

mRNA expression in normal human tissues for OR52E5 Gene

genes like me logo Genes that share expressions with OR52E5: view

Orthologs for OR52E5 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for OR52E5 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Olfr678 16
Species with no ortholog for OR52E5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for OR52E5 Gene

ENSEMBL:
Gene Tree for OR52E5 (if available)
TreeFam:
Gene Tree for OR52E5 (if available)

Paralogs for OR52E5 Gene

Selected SIMAP similar genes for OR52E5 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with OR52E5: view

No data available for Paralogs for OR52E5 Gene

Variants for OR52E5 Gene

Sequence variations from dbSNP and Humsavar for OR52E5 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
VAR_034338 -
VAR_034339 -
VAR_034340 -

Relevant External Links for OR52E5 Gene

HapMap Linkage Disequilibrium report
OR52E5

No data available for Structural Variations from Database of Genomic Variants (DGV) for OR52E5 Gene

Disorders for OR52E5 Gene

No disorders were found for OR52E5 Gene.

No data available for UniProtKB/Swiss-Prot for OR52E5 Gene

Publications for OR52E5 Gene

  1. The human olfactory receptor gene family. (PMID: 14983052) Malnic B. … Buck L.B. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3

Products for OR52E5 Gene

Sources for OR52E5 Gene

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