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Aliases for KRT33A Gene

Aliases for KRT33A Gene

  • Keratin 33A, Type I 2 3
  • KRTHA3A 3 4 6
  • Hair Keratin, Type I Ha3-I 3 4
  • Keratin, Hair, Acidic, 3A 2 3
  • HHa3-I 3 4
  • HA3I 3 6
  • K33A 3 4
  • Keratin, Type I Cuticular Ha3-I 3
  • Hard Keratin, Type I,3I 3
  • Hard Keratin Type I 3I 2
  • Keratin 33A 2
  • Keratin-33A 4
  • Krt1-3 3
  • Ha-3I 3
  • HKA3A 4

External Ids for KRT33A Gene

Previous Symbols for KRT33A Gene

  • KRTHA3A

Summaries for KRT33A Gene

Entrez Gene Summary for KRT33A Gene

  • This gene encodes a member of the keratin gene family. This gene is one of multiple type I hair keratin genes that are clustered in a region of chromosome 17q12-q21 and have the same direction of transcription. As a type I hair keratin, the encoded protein is an acidic protein which heterodimerizes with type II keratins to form hair and nails. There are two isoforms of this protein, encoded by two separate genes, keratin 33A and keratin 33B. [provided by RefSeq, May 2012]

GeneCards Summary for KRT33A Gene

KRT33A (Keratin 33A, Type I) is a Protein Coding gene. GO annotations related to this gene include structural molecule activity. An important paralog of this gene is KRT34.

Gene Wiki entry for KRT33A Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for KRT33A Gene

Genomics for KRT33A Gene

Genomic Location for KRT33A Gene

Start:
41,346,092 bp from pter
End:
41,350,812 bp from pter
Size:
4,721 bases
Orientation:
Minus strand

Genomic View for KRT33A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for KRT33A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for KRT33A Gene

Regulatory Elements for KRT33A Gene

Proteins for KRT33A Gene

  • Protein details for KRT33A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O76009-KT33A_HUMAN
    Recommended name:
    Keratin, type I cuticular Ha3-I
    Protein Accession:
    O76009
    Secondary Accessions:
    • B2RA87
    • Q6NTB9
    • Q6ZZB9

    Protein attributes for KRT33A Gene

    Size:
    404 amino acids
    Molecular mass:
    45940 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • There are two types of hair/microfibrillar keratin, I (acidic) and II (neutral to basic)

neXtProt entry for KRT33A Gene

Proteomics data for KRT33A Gene at MOPED

Post-translational modifications for KRT33A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for KRT33A Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for KRT33A Gene

Domains for KRT33A Gene

Gene Families for KRT33A Gene

HGNC:
  • IFF2 :Intermediate filaments type II, keratins (basic)

Protein Domains for KRT33A Gene

UniProtKB/Swiss-Prot:

KT33A_HUMAN
Family:
  • Belongs to the intermediate filament family.:
    • O76009
genes like me logo Genes that share domains with KRT33A: view

Function for KRT33A Gene

Gene Ontology (GO) - Molecular Function for KRT33A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005198 structural molecule activity IEA --
genes like me logo Genes that share ontologies with KRT33A: view
genes like me logo Genes that share phenotypes with KRT33A: view

miRNA for KRT33A Gene

miRTarBase miRNAs that target KRT33A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for KRT33A Gene

Localization for KRT33A Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for KRT33A Gene COMPARTMENTS Subcellular localization image for KRT33A gene
Compartment Confidence
cytoskeleton 3
cytosol 3
mitochondrion 2
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for KRT33A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space IDA 23580065
GO:0005882 intermediate filament IEA --
genes like me logo Genes that share ontologies with KRT33A: view

Pathways for KRT33A Gene

SuperPathways for KRT33A Gene

No Data Available

Gene Ontology (GO) - Biological Process for KRT33A Gene

None

No data available for Pathways by source for KRT33A Gene

Transcripts for KRT33A Gene

mRNA/cDNA for KRT33A Gene

Unigene Clusters for KRT33A Gene

Keratin 33A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for KRT33A Gene

No ASD Table

Relevant External Links for KRT33A Gene

GeneLoc Exon Structure for
KRT33A
ECgene alternative splicing isoforms for
KRT33A

Expression for KRT33A Gene

mRNA expression in normal human tissues for KRT33A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for KRT33A Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (44.8) and Skin - Sun Exposed (Lower leg) (5.7).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for KRT33A Gene

SOURCE GeneReport for Unigene cluster for KRT33A Gene Hs.512579

mRNA Expression by UniProt/SwissProt for KRT33A Gene

O76009-KT33A_HUMAN
Tissue specificity: Expressed in the hair follicles.
genes like me logo Genes that share expressions with KRT33A: view

Orthologs for KRT33A Gene

This gene was present in the common ancestor of mammals.

Orthologs for KRT33A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia KRT33A 36
  • 98.84 (n)
  • 98.27 (a)
KRT33A 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 37
  • 87 (a)
ManyToMany
HKA1 37
  • 86 (a)
ManyToMany
KRT31 37
  • 83 (a)
ManyToMany
KRT33A 37
  • 89 (a)
ManyToMany
LOC618455 36
  • 88.68 (n)
  • 88.16 (a)
dog
(Canis familiaris)
Mammalia -- 37
  • 88 (a)
ManyToMany
-- 37
  • 89 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Krt31 37
  • 86 (a)
ManyToMany
Krt33a 16
Krt33a 37
  • 89 (a)
ManyToMany
Krt33b 37
  • 87 (a)
ManyToMany
Krt34 37
  • 87 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 83 (a)
ManyToMany
-- 37
  • 74 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 80 (a)
ManyToMany
-- 37
  • 81 (a)
ManyToMany
-- 37
  • 80 (a)
ManyToMany
Species with no ortholog for KRT33A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for KRT33A Gene

ENSEMBL:
Gene Tree for KRT33A (if available)
TreeFam:
Gene Tree for KRT33A (if available)

Paralogs for KRT33A Gene

genes like me logo Genes that share paralogs with KRT33A: view

Variants for KRT33A Gene

Sequence variations from dbSNP and Humsavar for KRT33A Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs3760342 -- 41,351,718(+) AACAC(G/T)TGGCT upstream-variant-2KB
rs3760343 -- 41,352,304(+) GAGCA(A/G)CTTGG upstream-variant-2KB
rs3760344 -- 41,352,720(+) TGCTT(C/G)CAAGA upstream-variant-2KB
rs4640241 -- 41,350,932(+) GATTG(G/T)CAAAA upstream-variant-2KB
rs6503623 -- 41,347,407(+) CTTTC(A/G)AGCCC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for KRT33A Gene

Variant ID Type Subtype PubMed ID
dgv961e1 CNV Complex 17122850
nsv518572 CNV Loss 19592680
nsv509656 CNV Insertion 20534489
nsv483014 CNV Loss 15286789
nsv2051 CNV Loss 18451855
nsv9553 CNV Loss 18304495
nsv514844 CNV Loss 21397061
esv2671270 CNV Deletion 23128226
esv25327 CNV Loss 19812545

Relevant External Links for KRT33A Gene

HapMap Linkage Disequilibrium report
KRT33A

Disorders for KRT33A Gene

No disorders were found for KRT33A Gene.

No data available for UniProtKB/Swiss-Prot for KRT33A Gene

Publications for KRT33A Gene

  1. A novel human type I hair keratin gene: evidence for two keratin hHa3 isoforms. (PMID: 7565656) Rogers M.A. … Winter H. (Mol. Biol. Rep. 1994) 2 3
  2. Characterization of a 190-kilobase pair domain of human type I hair keratin genes. (PMID: 9756910) Rogers M.A. … Schweizer J. (J. Biol. Chem. 1998) 3 4
  3. The human type I keratin gene family: characterization of new hair follicle specific members and evaluation of the chromosome 17q21.2 gene domain. (PMID: 15617563) Rogers M.A. … Schweizer J. (Differentiation 2004) 3 4
  4. New consensus nomenclature for mammalian keratins. (PMID: 16831889) Schweizer J. … Wright M.W. (J. Cell Biol. 2006) 2 3
  5. Large-scale mapping of human protein-protein interactions by mass spectrometry. (PMID: 17353931) Ewing R.M. … Figeys D. (Mol. Syst. Biol. 2007) 3

Products for KRT33A Gene

Sources for KRT33A Gene

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