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Aliases for RRP7A Gene

Aliases for RRP7A Gene

  • Ribosomal RNA Processing 7 Homolog A (S. Cerevisiae) 2 3
  • Gastric Cancer Antigen Zg14 3 4
  • Ribosomal RNA-Processing Protein 7 Homolog A 3
  • CTA-126B4.5 3
  • BK126B4.3 3
  • CGI-96 3

External Ids for RRP7A Gene

Previous GeneCards Identifiers for RRP7A Gene

  • GC22M041238
  • GC22M042905

Summaries for RRP7A Gene

GeneCards Summary for RRP7A Gene

RRP7A (Ribosomal RNA Processing 7 Homolog A (S. Cerevisiae)) is a Protein Coding gene. Among its related pathways are Ribosome biogenesis in eukaryotes. GO annotations related to this gene include RNA binding and nucleotide binding.

Gene Wiki entry for RRP7A Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RRP7A Gene

Genomics for RRP7A Gene

Regulatory Elements for RRP7A Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for RRP7A Gene

42,508,335 bp from pter
42,519,823 bp from pter
11,489 bases
Minus strand

Genomic View for RRP7A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RRP7A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RRP7A Gene

Proteins for RRP7A Gene

  • Protein details for RRP7A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Ribosomal RNA-processing protein 7 homolog A
    Protein Accession:
    Secondary Accessions:
    • A4FTX2
    • B2RBG4
    • Q0VAD0
    • Q5JZ94
    • Q6P4B5
    • Q8IVR9
    • Q8IVY0
    • Q8N5Q3
    • Q8NEY6
    • Q9Y3H5

    Protein attributes for RRP7A Gene

    280 amino acids
    Molecular mass:
    32334 Da
    Quaternary structure:
    No Data Available
    • Sequence=AAH31838.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for RRP7A Gene

Proteomics data for RRP7A Gene at MOPED

Post-translational modifications for RRP7A Gene

  • Ubiquitination at Lys33, Lys149, and Lys250
  • Modification sites at PhosphoSitePlus

Other Protein References for RRP7A Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for RRP7A Gene

Domains for RRP7A Gene

Protein Domains for RRP7A Gene

Suggested Antigen Peptide Sequences for RRP7A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Contains 1 RRM (RNA recognition motif) domain.
  • Belongs to the RRP7 family.
  • Contains 1 RRM (RNA recognition motif) domain.
  • Belongs to the RRP7 family.
genes like me logo Genes that share domains with RRP7A: view

No data available for Gene Families for RRP7A Gene

Function for RRP7A Gene

Gene Ontology (GO) - Molecular Function for RRP7A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0005515 protein binding IPI 25416956
GO:0044822 poly(A) RNA binding IDA 22658674
genes like me logo Genes that share ontologies with RRP7A: view

Phenotypes for RRP7A Gene

GenomeRNAi human phenotypes for RRP7A:
genes like me logo Genes that share phenotypes with RRP7A: view

Animal Model Products

CRISPR Products

miRNA for RRP7A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targets and HOMER Transcription for RRP7A Gene

Localization for RRP7A Gene

Subcellular locations from

Jensen Localization Image for RRP7A Gene COMPARTMENTS Subcellular localization image for RRP7A gene
Compartment Confidence
nucleus 3
mitochondrion 2
cytosol 1

Gene Ontology (GO) - Cellular Components for RRP7A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0032545 CURI complex IBA --
GO:0034456 UTP-C complex IBA --
genes like me logo Genes that share ontologies with RRP7A: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for RRP7A Gene

Pathways for RRP7A Gene

genes like me logo Genes that share pathways with RRP7A: view

Pathways by source for RRP7A Gene

1 KEGG pathway for RRP7A Gene

Gene Ontology (GO) - Biological Process for RRP7A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000028 ribosomal small subunit assembly IBA --
GO:0006364 rRNA processing IBA --
genes like me logo Genes that share ontologies with RRP7A: view

Transcripts for RRP7A Gene

mRNA/cDNA for RRP7A Gene

Unigene Clusters for RRP7A Gene

Ribosomal RNA processing 7 homolog A (S. cerevisiae):
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for RRP7A

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RRP7A Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b
SP2: -
SP3: - -

Relevant External Links for RRP7A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RRP7A Gene

mRNA expression in normal human tissues for RRP7A Gene

Protein differential expression in normal tissues for RRP7A Gene

This gene is overexpressed in CD8 Tcells (14.7), Pancreas (12.9), Peripheral blood mononuclear cells (9.1), and Blymphocyte (9.1).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for RRP7A Gene

SOURCE GeneReport for Unigene cluster for RRP7A Gene Hs.745006

genes like me logo Genes that share expressions with RRP7A: view

Expression partners for RRP7A Gene

* - Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RRP7A Gene

Orthologs for RRP7A Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for RRP7A Gene

Organism Taxonomy Gene Similarity Type Details
(Canis familiaris)
Mammalia RRP7A 35
  • 86.37 (n)
  • 87.36 (a)
RRP7A 36
  • 87 (a)
(Mus musculus)
Mammalia Rrp7a 35
  • 82.74 (n)
  • 83.93 (a)
Rrp7a 16
Rrp7a 36
  • 84 (a)
(Rattus norvegicus)
Mammalia Rrp7a 35
  • 83.57 (n)
  • 84.29 (a)
(Bos Taurus)
Mammalia RRP7A 36
  • 76 (a)
(Monodelphis domestica)
Mammalia RRP7A 36
  • 67 (a)
(Ornithorhynchus anatinus)
Mammalia RRP7A 36
  • 55 (a)
(Pan troglodytes)
Mammalia -- 36
  • 89 (a)
-- 36
  • 94 (a)
(Gallus gallus)
Aves RRP7A 35
  • 66.91 (n)
  • 65.81 (a)
RRP7A 36
  • 64 (a)
(Anolis carolinensis)
Reptilia RRP7A 36
  • 63 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia rrp7a 35
  • 61.83 (n)
  • 60.22 (a)
Str.10145 35
African clawed frog
(Xenopus laevis)
Amphibia Xl.15159 35
(Danio rerio)
Actinopterygii rrp7a 35
  • 56.68 (n)
  • 46.44 (a)
rrp7a 36
  • 43 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.7695 35
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP001656 35
  • 49.8 (n)
  • 40.32 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG9107 35
  • 52.08 (n)
  • 37.11 (a)
CG9107 36
  • 35 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes RRP7 38
sea squirt
(Ciona savignyi)
Ascidiacea CSA.2355 36
  • 37 (a)
Species with no ortholog for RRP7A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RRP7A Gene

Gene Tree for RRP7A (if available)
Gene Tree for RRP7A (if available)

Paralogs for RRP7A Gene

(1) SIMAP similar genes for RRP7A Gene using alignment to 2 proteins: Pseudogenes for RRP7A Gene

genes like me logo Genes that share paralogs with RRP7A: view

No data available for Paralogs for RRP7A Gene

Variants for RRP7A Gene

Sequence variations from dbSNP and Humsavar for RRP7A Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs137061 -- 42,513,624(+) CAGCC(A/G)CAGCA intron-variant
rs645164 -- 42,517,972(+) GAGCC(A/C)ACAGG intron-variant
rs645176 -- 42,517,980(+) AGGTC(C/T)CCTCC intron-variant
rs645556 -- 42,518,031(+) ATTGA(A/G)GACAA reference, missense
rs645625 -- 42,518,078(+) CTTGT(A/C/G/T)GAACG missense, reference

Structural Variations from Database of Genomic Variants (DGV) for RRP7A Gene

Variant ID Type Subtype PubMed ID
dgv1407e1 CNV Complex 17122850
nsv428391 CNV Gain 18775914
essv4940 CNV CNV 17122850
esv32632 CNV Gain 17666407
esv2724283 CNV Deletion 23290073
esv28197 CNV Gain 19812545
nsv9912 CNV Gain+Loss 18304495
nsv829246 CNV Loss 20364138
dgv773n67 CNV Gain 20364138
dgv103e180 CNV Gain 20482838
essv20414 CNV CNV 17122850
dgv781e201 CNV Deletion 23290073
nsv442798 CNV CNV 18776908
esv2659886 CNV Deletion 23128226
nsv482078 CNV Gain 20164927
nsv436074 CNV Insertion 17901297
nsv511642 CNV Loss 21212237
nsv915179 CNV Gain 21882294

Relevant External Links for RRP7A Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RRP7A Gene

Disorders for RRP7A Gene

No disorders were found for RRP7A Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for RRP7A Gene

Publications for RRP7A Gene

  1. Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics. (PMID: 10810093) Lai C.-H. … Lin W.-C. (Genome Res. 2000) 2 3 4
  2. Serological identification and expression analysis of gastric cancer- associated genes. (PMID: 12087473) Line A. … Rees R.C. (Br. J. Cancer 2002) 2 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I. … Wright H. (Nature 1999) 3 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4

Products for RRP7A Gene

Sources for RRP7A Gene

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