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Aliases for GAS6 Gene

Aliases for GAS6 Gene

  • Growth Arrest-Specific 6 2 3
  • AXLLG 3 4 6
  • AXL Receptor Tyrosine Kinase Ligand 3 4
  • AXL Stimulatory Factor 2 3
  • AXSF 3 6
  • Growth Arrest-Specific Protein 6 3
  • GAS-6 4

External Ids for GAS6 Gene

Previous HGNC Symbols for GAS6 Gene

  • AXLLG

Previous GeneCards Identifiers for GAS6 Gene

  • GC13U990018
  • GC13P113563
  • GC13P112446
  • GC13P113546
  • GC13M114523
  • GC13P094864

Summaries for GAS6 Gene

Entrez Gene Summary for GAS6 Gene

  • This gene encodes a gamma-carboxyglutamic acid (Gla)-containing protein thought to be involved in the stimulation of cell proliferation. This gene is frequently overexpressed in many cancers and has been implicated as an adverse prognostic marker. Elevated protein levels are additionally associated with a variety of disease states, including venous thromboembolic disease, systemic lupus erythematosus, chronic renal failure, and preeclampsia. [provided by RefSeq, Aug 2014]

GeneCards Summary for GAS6 Gene

GAS6 (Growth Arrest-Specific 6) is a Protein Coding gene. Diseases associated with GAS6 include critical limb ischemia and limb ischemia. Among its related pathways are NF-KappaB Family Pathway and NF-KappaB Family Pathway. GO annotations related to this gene include calcium ion binding and voltage-gated calcium channel activity. An important paralog of this gene is SHBG.

UniProtKB/Swiss-Prot for GAS6 Gene

  • Ligand for tyrosine-protein kinase receptors AXL, TYRO3 and MER whose signaling is implicated in cell growth and survival, cell adhesion and cell migration. GAS6/AXL signaling plays a role in various processes such as endothelial cell survival during acidification by preventing apoptosis, optimal cytokine signaling during human natural killer cell development, hepatic regeneration, gonadotropin-releasing hormone neuron survival and migration, platelet activation, or regulation of thrombotic responses.

Gene Wiki entry for GAS6 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAS6 Gene

Genomics for GAS6 Gene

Regulatory Elements for GAS6 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for GAS6 Gene

Start:
113,820,549 bp from pter
End:
113,864,073 bp from pter
Size:
43,525 bases
Orientation:
Minus strand

Genomic View for GAS6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for GAS6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAS6 Gene

Proteins for GAS6 Gene

  • Protein details for GAS6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q14393-GAS6_HUMAN
    Recommended name:
    Growth arrest-specific protein 6
    Protein Accession:
    Q14393
    Secondary Accessions:
    • B3KRQ7
    • B3KVL4
    • E9PBL7
    • Q6IMN1
    • Q7Z7N3

    Protein attributes for GAS6 Gene

    Size:
    721 amino acids
    Molecular mass:
    79677 Da
    Quaternary structure:
    • Heterodimer and heterotetramer with AXL.

    Three dimensional structures from OCA and Proteopedia for GAS6 Gene

    Alternative splice isoforms for GAS6 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for GAS6 Gene

Proteomics data for GAS6 Gene at MOPED

Post-translational modifications for GAS6 Gene

  • Gamma-carboxyglutamate residues are formed by vitamin K dependent carboxylation. These residues are essential for the binding of calcium.
  • Isoform 1 is proteolytically processed after secretion to yield a N-terminal 36 kDa protein and a C-terminal 50 kDa protein including the laminin G-like domains which activates AXL.
  • Glycosylation at Asn463
  • Modification sites at PhosphoSitePlus

Other Protein References for GAS6 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

Antibody Products

No data available for DME Specific Peptides for GAS6 Gene

Domains for GAS6 Gene

Graphical View of Domain Structure for InterPro Entry

Q14393

UniProtKB/Swiss-Prot:

GAS6_HUMAN :
  • Q14393
Domain:
  • Contains 4 EGF-like domains.
  • Contains 1 Gla (gamma-carboxy-glutamate) domain.
  • Contains 2 laminin G-like domains.
genes like me logo Genes that share domains with GAS6: view

No data available for Gene Families for GAS6 Gene

Function for GAS6 Gene

Molecular function for GAS6 Gene

GENATLAS Biochemistry:
growth arrest specific gene 6,with homology to PROS1,ligand for TYRO3/AXL family of receptor tyrosine kinase
UniProtKB/Swiss-Prot Function:
Ligand for tyrosine-protein kinase receptors AXL, TYRO3 and MER whose signaling is implicated in cell growth and survival, cell adhesion and cell migration. GAS6/AXL signaling plays a role in various processes such as endothelial cell survival during acidification by preventing apoptosis, optimal cytokine signaling during human natural killer cell development, hepatic regeneration, gonadotropin-releasing hormone neuron survival and migration, platelet activation, or regulation of thrombotic responses.

Gene Ontology (GO) - Molecular Function for GAS6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001786 phosphatidylserine binding IDA 21501828
GO:0005102 receptor binding IPI 7854420
GO:0005245 voltage-gated calcium channel activity IDA 18395422
GO:0005509 calcium ion binding IEA --
GO:0005515 protein binding IPI 16362042
genes like me logo Genes that share ontologies with GAS6: view
genes like me logo Genes that share phenotypes with GAS6: view

Animal Models for GAS6 Gene

MGI Knock Outs for GAS6:

Animal Model Products

miRNA for GAS6 Gene

miRTarBase miRNAs that target GAS6

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for GAS6

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targeting and HOMER Transcription for GAS6 Gene

Localization for GAS6 Gene

Subcellular locations from UniProtKB/Swiss-Prot for GAS6 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for GAS6 Gene COMPARTMENTS Subcellular localization image for GAS6 gene
Compartment Confidence
extracellular 5
endoplasmic reticulum 4
golgi apparatus 4
plasma membrane 2
nucleus 1

Gene Ontology (GO) - Cellular Components for GAS6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005615 extracellular space IDA 18395422
GO:0005622 intracellular --
GO:0005737 cytoplasm IDA 18395422
GO:0005788 endoplasmic reticulum lumen TAS --
genes like me logo Genes that share ontologies with GAS6: view

Pathways for GAS6 Gene

genes like me logo Genes that share pathways with GAS6: view

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

Gene Ontology (GO) - Biological Process for GAS6 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001764 neuron migration IEA --
GO:0001934 positive regulation of protein phosphorylation ISS --
GO:0001961 positive regulation of cytokine-mediated signaling pathway IMP 18840707
GO:0002576 platelet degranulation TAS --
GO:0003104 positive regulation of glomerular filtration ISS --
genes like me logo Genes that share ontologies with GAS6: view

Compounds for GAS6 Gene

(1) HMDB Compounds for GAS6 Gene

Compound Synonyms Cas Number PubMed IDs
Calcium
  • Ca
7440-70-2

(8) Novoseek inferred chemical compound relationships for GAS6 Gene

Compound -log(P) Hits PubMed IDs
gamma-carboxyglutamic acid 75.7 9
tyrosine 73.3 75
warfarin 59.7 14
wortmannin 46.9 3
phosphatidylinositol 34.9 1
genes like me logo Genes that share compounds with GAS6: view

Transcripts for GAS6 Gene

Unigene Clusters for GAS6 Gene

Growth arrest-specific 6:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for GAS6

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAS6 Gene

ExUns: 1 ^ 2a · 2b · 2c · 2d ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8a · 8b ^ 9a · 9b ^ 10a · 10b ^ 11a · 11b ^ 12a · 12b ^ 13a · 13b
SP1: - - -
SP2: -
SP3:
SP4: - -
SP5: - -
SP6: - - - - -
SP7:
SP8:
SP9: -
SP10:

Relevant External Links for GAS6 Gene

GeneLoc Exon Structure for
GAS6
ECgene alternative splicing isoforms for
GAS6

Expression for GAS6 Gene

mRNA expression in normal human tissues for GAS6 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for GAS6 Gene

This gene is overexpressed in Artery - Aorta (6.5).

Protein differential expression in normal tissues for GAS6 Gene

This gene is overexpressed in Amniocyte (24.4), Breast (14.6), Bone marrow mesenchymal stem cell (9.5), Urine (7.9), and Bone marrow stromal cell (6.3).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for GAS6 Gene

SOURCE GeneReport for Unigene cluster for GAS6 Gene Hs.646346

mRNA Expression by UniProt/SwissProt for GAS6 Gene

Q14393-GAS6_HUMAN
Tissue specificity: Plasma. Isoform 1 and isoform 2 are widely expressed. Isoform 1 is the predominant form in spleen.
genes like me logo Genes that share expressions with GAS6: view

In Situ Assay Products

No data available for Expression partners for GAS6 Gene

Orthologs for GAS6 Gene

This gene was present in the common ancestor of chordates.

Orthologs for GAS6 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia GAS6 35
  • 82.74 (n)
  • 80.83 (a)
GAS6 36
  • 76 (a)
OneToOne
dog
(Canis familiaris)
Mammalia GAS6 35
  • 79.53 (n)
  • 77.93 (a)
GAS6 36
  • 75 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gas6 35
  • 80.48 (n)
  • 83.05 (a)
Gas6 16
Gas6 36
  • 81 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia GAS6 35
  • 92.07 (n)
  • 91.29 (a)
GAS6 36
  • 91 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Gas6 35
  • 80.93 (n)
  • 84.01 (a)
oppossum
(Monodelphis domestica)
Mammalia GAS6 36
  • 69 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia GAS6 36
  • 71 (a)
OneToOne
chicken
(Gallus gallus)
Aves GAS6 35
  • 66.84 (n)
  • 67.47 (a)
GAS6 36
  • 65 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia GAS6 36
  • 65 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia gas6 35
  • 63.67 (n)
  • 64.67 (a)
Str.18141 35
African clawed frog
(Xenopus laevis)
Amphibia MGC68463 35
zebrafish
(Danio rerio)
Actinopterygii gas6 35
  • 60.05 (n)
  • 53.17 (a)
wufj34a12 35
gas6 36
  • 50 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 22 (a)
ManyToMany
-- 36
  • 29 (a)
ManyToMany
Species with no ortholog for GAS6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for GAS6 Gene

ENSEMBL:
Gene Tree for GAS6 (if available)
TreeFam:
Gene Tree for GAS6 (if available)

Paralogs for GAS6 Gene

Paralogs for GAS6 Gene

Selected SIMAP similar genes for GAS6 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for GAS6 Gene

genes like me logo Genes that share paralogs with GAS6: view

Variants for GAS6 Gene

Sequence variations from dbSNP and Humsavar for GAS6 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
rs6602907 -- 113,854,965(-) GGGGC(C/T)GGGGT intron-variant
rs6602908 -- 113,849,066(-) GTGGC(A/G)AGGCC intron-variant
rs6602909 -- 113,849,020(-) AGGCC(A/G)TGCAG intron-variant
rs6602910 -- 113,846,042(-) TGCAT(A/G)TTGGC intron-variant
rs6602911 -- 113,844,399(-) AAGGC(A/G)TCGCC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for GAS6 Gene

Variant ID Type Subtype PubMed ID
nsv832727 CNV Loss 17160897
nsv826836 CNV Loss 20364138
nsv901084 CNV Loss 21882294
nsv826837 CNV Loss 20364138
esv24756 CNV Gain+Loss 19812545
nsv901089 CNV Loss 21882294
nsv901083 CNV Loss 21882294
dgv1803n71 CNV Loss 21882294
nsv901090 CNV Loss 21882294
esv2748392 CNV Deletion 23290073
esv2748393 CNV Deletion 23290073
esv2748394 CNV Deletion 23290073
esv2748395 CNV Deletion 23290073
esv2748396 CNV Deletion 23290073
esv2748398 CNV Deletion 23290073
esv2748399 CNV Deletion 23290073
dgv284e201 CNV Deletion 23290073
esv2748401 CNV Deletion 23290073
esv2748403 CNV Deletion 23290073
esv2748404 CNV Deletion 23290073
dgv285e201 CNV Deletion 23290073
esv2748406 CNV Deletion 23290073
esv2748409 CNV Deletion 23290073
nsv511027 OTHER Inversion 20534489
esv2748410 CNV Deletion 23290073
esv1993584 CNV Deletion 18987734
esv2748411 CNV Deletion 23290073
nsv820519 CNV Duplication 20802225
esv27370 CNV Loss 19812545
esv2493664 CNV Deletion 19546169
esv1157105 CNV Insertion 17803354
esv2748412 CNV Deletion 23290073
esv2748413 CNV Deletion 23290073
esv1444149 CNV Deletion 17803354
esv2677402 CNV Deletion 23128226
esv2748414 CNV Deletion 23290073
esv1344439 CNV Insertion 17803354
esv1258186 CNV Insertion 17803354
esv1443107 CNV Insertion 17803354
esv2748415 CNV Deletion 23290073
esv2748416 CNV Deletion 23290073
esv2748417 CNV Deletion 23290073

Relevant External Links for GAS6 Gene

HapMap Linkage Disequilibrium report
GAS6
Human Gene Mutation Database (HGMD)
GAS6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for GAS6 Gene

Disorders for GAS6 Gene

MalaCards: The human disease database

MalaCards: The human disease database.

Search for GAS6 Gene in MalaCards »

(4) Diseases for GAS6 Gene including...

(23) Novoseek inferred disease relationships for GAS6 Gene

Disease -log(P) Hits PubMed IDs
glomerulonephritis mesangial proliferative 44.9 1
calcification 42.3 14
chronic glomerulonephritis 34.9 2
albuminuria 27.4 2
thrombosis 24.8 7

Relevant External Links for GAS6

Genetic Association Database (GAD)
GAS6
Human Genome Epidemiology (HuGE) Navigator
GAS6
genes like me logo Genes that share disorders with GAS6: view

No data available for OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES and Genatlas for GAS6 Gene

Publications for GAS6 Gene

  1. The protein encoded by a growth arrest-specific gene (gas6) is a new member of the vitamin K-dependent proteins related to protein S, a negative coregulator in the blood coagulation cascade. (PMID: 8336730) Manfioletti G. … Schneider C. (Mol. Cell. Biol. 1993) 2 3 4 23
  2. Human vitamin K-dependent GAS6: gene structure, allelic variation, and association with stroke. (PMID: 15108283) Munoz X. … Sala N. (Hum. Mutat. 2004) 3 4 23 48
  3. Association of specific haplotypes of GAS6 gene with stroke. (PMID: 17721624) MuA+oz X. … Sala N. (Thromb. Haemost. 2007) 3 23 48
  4. Characterization of Gas6, a member of the superfamily of G domain- containing proteins, as a ligand for Rse and Axl. (PMID: 8621659) Mark M.R. … Godowski P.J. (J. Biol. Chem. 1996) 3 4 23
  5. Identification and tissue expression of a splice variant for the growth arrest-specific gene gas6. (PMID: 9326368) Marcandalli P. … Schneider C. (FEBS Lett. 1997) 3 4 23

Products for GAS6 Gene

Sources for GAS6 Gene

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