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Aliases for EPHB1 Gene

Aliases for EPHB1 Gene

  • EPH Receptor B1 2 3 5
  • Neuronally-Expressed EPH-Related Tyrosine Kinase 3 4
  • Tyrosine-Protein Kinase Receptor EPH-2 3 4
  • EPH-Like Kinase 6 3 4
  • EC 2.7.10.1 4 58
  • EPHT2 3 4
  • Hek6 3 4
  • NET 3 4
  • EK6 3 4
  • ELK 3 4
  • Ephrin Type-B Receptor 1 3
  • Soluble EPHB1 Variant 1 3
  • Eph Tyrosine Kinase 2 3
  • EPH Tyrosine Kinase 2 4
  • EC 2.7.10 58
  • EphB1 2

External Ids for EPHB1 Gene

Previous HGNC Symbols for EPHB1 Gene

  • EPHT2

Previous GeneCards Identifiers for EPHB1 Gene

  • GC03M131897
  • GC03P135607
  • GC03P135795
  • GC03P135835
  • GC03P135996
  • GC03P134316
  • GC03P131890

Summaries for EPHB1 Gene

Entrez Gene Summary for EPHB1 Gene

  • Ephrin receptors and their ligands, the ephrins, mediate numerous developmental processes, particularly in the nervous system. Based on their structures and sequence relationships, ephrins are divided into the ephrin-A (EFNA) class, which are anchored to the membrane by a glycosylphosphatidylinositol linkage, and the ephrin-B (EFNB) class, which are transmembrane proteins. The Eph family of receptors are divided into 2 groups based on the similarity of their extracellular domain sequences and their affinities for binding ephrin-A and ephrin-B ligands. Ephrin receptors make up the largest subgroup of the receptor tyrosine kinase (RTK) family. The protein encoded by this gene is a receptor for ephrin-B family members. [provided by RefSeq, Jul 2008]

GeneCards Summary for EPHB1 Gene

EPHB1 (EPH Receptor B1) is a Protein Coding gene. Among its related pathways are Akt Signaling and Nanog in Mammalian ESC Pluripotency. GO annotations related to this gene include transferase activity, transferring phosphorus-containing groups and protein tyrosine kinase activity. An important paralog of this gene is EPHB2.

UniProtKB/Swiss-Prot for EPHB1 Gene

  • Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Cognate/functional ephrin ligands for this receptor include EFNB1, EFNB2 and EFNB3. During nervous system development, regulates retinal axon guidance redirecting ipsilaterally ventrotemporal retinal ganglion cells axons at the optic chiasm midline. This probably requires repulsive interaction with EFNB2. In the adult nervous system together with EFNB3, regulates chemotaxis, proliferation and polarity of the hippocampus neural progenitors. In addition to its role in axon guidance plays also an important redundant role with other ephrin-B receptors in development and maturation of dendritic spines and synapse formation. May also regulate angiogenesis. More generally, may play a role in targeted cell migration and adhesion. Upon activation by EFNB1 and probably other ephrin-B ligands activates the MAPK/ERK and the JNK signaling cascades to regulate cell migration and adhesion respectively. Involved in the maintenance of the pool of satellite cells (muscle stem cells) by promoting their self-renewal and reducing their activation and differentiation (By similarity).

Tocris Summary for EPHB1 Gene

  • Eph receptors are the largest family of receptor tyrosine kinases (RTKs) and are divided into two subclasses, EphA and EphB. Originally identified as mediators of axon guidance, Eph receptors are implicated in many processes, particularly cancer development and progression.

Gene Wiki entry for EPHB1 Gene

Additional gene information for EPHB1 Gene

No data available for CIViC summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for EPHB1 Gene

Genomics for EPHB1 Gene

Regulatory Elements for EPHB1 Gene

Enhancers for EPHB1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H134802 0.8 ENCODE 19.1 +205.2 205235 0 TBL1XR1 BMI1 EBF1 BATF RELA RUNX3 IKZF2 CHD2 MAZ NR2F1 EPHB1 PIR60355 RNA5SP141
GH03H134662 0.7 ENCODE dbSUPER 10.8 +66.4 66363 2 ZFHX2 HLF EGR2 ANAPC13 EPHB1 KY RNU6-1174P
GH03H134567 0.5 FANTOM5 11.5 -30.2 -30189 0 POLR2A GABPA ANAPC13 EPHB1 CEP63 PIR32535 GC03P134564
GH03H134685 0.6 ENCODE dbSUPER 4.8 +88.6 88577 1 FOS KY EPHB1 CEP63 RNU6-1174P
GH03H134600 0.7 Ensembl 0.7 +3.2 3229 0 CTCF ZNF654 MXI1 RFX1 RB1 TRIM22 MAX REST RAD21 ZNF143 ANAPC13 EPHB1 GC03M134600
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around EPHB1 on UCSC Golden Path with GeneCards custom track

Genomic Location for EPHB1 Gene

Chromosome:
3
Start:
134,597,801 bp from pter
End:
135,260,467 bp from pter
Size:
662,667 bases
Orientation:
Plus strand

Genomic View for EPHB1 Gene

Genes around EPHB1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
EPHB1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for EPHB1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for EPHB1 Gene

Proteins for EPHB1 Gene

  • Protein details for EPHB1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P54762-EPHB1_HUMAN
    Recommended name:
    Ephrin type-B receptor 1
    Protein Accession:
    P54762
    Secondary Accessions:
    • A8K593
    • B3KTB2
    • B5A969
    • O43569
    • O95142
    • O95143
    • Q0VG87

    Protein attributes for EPHB1 Gene

    Size:
    984 amino acids
    Molecular mass:
    109885 Da
    Quaternary structure:
    • Heterotetramer upon binding of the ligand. The heterotetramer is composed of an ephrin dimer and a receptor dimer. Oligomerization is probably required to induce biological responses (By similarity). Interacts with EPHB6; transphosphorylates EPHB6 to form an active signaling complex. Interacts with PICK1 (By similarity). Interacts (through Tyr-594) with NCK1 (via SH2 domain); activates the JUN cascade to regulate cell adhesion (By similarity). The ligand-activated form interacts (through Tyr-928) with GRB7 and GRB10 (via SH2 domains). The ligand-activated form interacts (residues within the catalytic domain) with GRB2 (via SH2 domain). Interacts with GRB2, SHC1 and SRC; activates the MAPK/ERK cascade to regulate cell migration. Interacts with CBL; regulates receptor degradation through ubiquitination. Interacts with ACP1.
    SequenceCaution:
    • Sequence=AAB94627.1; Type=Miscellaneous discrepancy; Note=wrong intron-exon boundaries.; Evidence={ECO:0000305}; Sequence=AAB94628.1; Type=Miscellaneous discrepancy; Note=wrong intron-exon boundaries.; Evidence={ECO:0000305}; Sequence=AAD02031.1; Type=Miscellaneous discrepancy; Note=Chimeric cDNA.; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for EPHB1 Gene

    Alternative splice isoforms for EPHB1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for EPHB1 Gene

Selected DME Specific Peptides for EPHB1 Gene

P54762:
  • MNYVHRDLAARN
  • AVPSQPLLDRSIPD
  • LEWHPPRETGGRDDV
  • QLVGMLRG
  • RDLAARN
  • CTSVPSGPRNVISIVNET
  • GAGEFGEV
  • MIRNPASLKTVATI
  • RWTAPEAI
  • WSYGIVMWEVMS
  • CKETFNL
  • RKFTSASD
  • SLQLVTQ
  • TTNQAAPS
  • CKKCRADRR
  • EDLLRIG
  • GFTSLQLV
  • ARSQTNTA
  • YIDPFTYEDPNEAV
  • SDVWSYGI
  • DTIAADE
  • YVHRDLAARNILVN
  • SDPTYTS
  • TYQVCNV
  • CSRCDDNV
  • GERPYWD
  • QNNWLLTTFI
  • VRSFGPL
  • YRLPPPMDCP
  • LEGVVTKS
  • PRQLGLT
  • VDDWLSAIKM
  • FPETMTGAESTSLV
  • NLVCKVSDFGLSR
  • MSNQDVI
  • GGKIPVRWTA
  • PVMIITE
  • LDSFLRQ
  • LDKMIRNP
  • GWEEVSGYDE
  • CNGDGEW
  • REFAKEID
  • ACPAGTFKASQ
  • TEFMENG
  • VSLVAISIVCSRKRAYSKE
  • GMLRGIAAGM
  • NIIRLEGV
  • GFYLAFQD
  • PNGIILDYE
  • DGQFTVIQL
  • VAIKTLKAGY
  • SVRVFFKKCP
  • GRLKLPG
  • EASIMGQF
  • DYKSELREQLPL
  • KMCFQTLT
  • TATAELGW
  • QLMLDCW
  • LMLDCWQK
  • VQVRARTVAGYG
  • LAGHQKKIL
  • PPRETGGRDDVTYNI
  • IMGQFDHPNII
  • LKLPGKR
  • AEEVDVPIK

Post-translational modifications for EPHB1 Gene

  • Phosphorylated. Autophosphorylation is stimulated by the ligand EFNB1. Required for interaction with SH2 domain-containing interactors, for activation of the MAPK/ERK and JUN signaling cascades and for ubiquitination by CBL.
  • Ubiquitinated; (EFNB1)ligand-induced poly- and/or multi-ubiquitination by CBL is regulated by SRC and leads to lysosomal degradation.
  • Glycosylation at posLast=334334, isoforms=426, and isoforms=5480
  • Modification sites at PhosphoSitePlus

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for EPHB1 (EphB1)

Domains & Families for EPHB1 Gene

Gene Families for EPHB1 Gene

Graphical View of Domain Structure for InterPro Entry

P54762

UniProtKB/Swiss-Prot:

EPHB1_HUMAN :
  • Belongs to the protein kinase superfamily. Tyr protein kinase family. Ephrin receptor subfamily.
Family:
  • Belongs to the protein kinase superfamily. Tyr protein kinase family. Ephrin receptor subfamily.
genes like me logo Genes that share domains with EPHB1: view

Function for EPHB1 Gene

Molecular function for EPHB1 Gene

GENATLAS Biochemistry:
EPH-related tyrosine kinase receptor,binding ephrins B1,B2,expressed in projecting neurons and their target fields,involved in short-range contact-mediated axonal guidance
UniProtKB/Swiss-Prot CatalyticActivity:
ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphate.
UniProtKB/Swiss-Prot Function:
Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Cognate/functional ephrin ligands for this receptor include EFNB1, EFNB2 and EFNB3. During nervous system development, regulates retinal axon guidance redirecting ipsilaterally ventrotemporal retinal ganglion cells axons at the optic chiasm midline. This probably requires repulsive interaction with EFNB2. In the adult nervous system together with EFNB3, regulates chemotaxis, proliferation and polarity of the hippocampus neural progenitors. In addition to its role in axon guidance plays also an important redundant role with other ephrin-B receptors in development and maturation of dendritic spines and synapse formation. May also regulate angiogenesis. More generally, may play a role in targeted cell migration and adhesion. Upon activation by EFNB1 and probably other ephrin-B ligands activates the MAPK/ERK and the JNK signaling cascades to regulate cell migration and adhesion respectively. Involved in the maintenance of the pool of satellite cells (muscle stem cells) by promoting their self-renewal and reducing their activation and differentiation (By similarity).

Enzyme Numbers (IUBMB) for EPHB1 Gene

Phenotypes From GWAS Catalog for EPHB1 Gene

Gene Ontology (GO) - Molecular Function for EPHB1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004672 protein kinase activity IEA --
GO:0004713 protein tyrosine kinase activity IEA --
GO:0004714 transmembrane receptor protein tyrosine kinase activity IEA --
GO:0005003 ephrin receptor activity IEA --
GO:0005005 transmembrane-ephrin receptor activity IDA 18034775
genes like me logo Genes that share ontologies with EPHB1: view
genes like me logo Genes that share phenotypes with EPHB1: view

Animal Models for EPHB1 Gene

MGI Knock Outs for EPHB1:

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for EPHB1
  • Applied Biological Materials Clones for EPHB1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for EPHB1 Gene

Localization for EPHB1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for EPHB1 Gene

Cell membrane; Single-pass type I membrane protein. Early endosome membrane. Cell projection, dendrite.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for EPHB1 gene
Compartment Confidence
plasma membrane 5
extracellular 5
endosome 5
endoplasmic reticulum 4
cytosol 4
cytoskeleton 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Plasma membrane (3)
  • Cytosol (2)
  • Endoplasmic reticulum (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for EPHB1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005737 cytoplasm IEA --
GO:0005768 endosome IEA --
GO:0005783 endoplasmic reticulum IDA --
GO:0005829 cytosol TAS --
genes like me logo Genes that share ontologies with EPHB1: view

Pathways & Interactions for EPHB1 Gene

genes like me logo Genes that share pathways with EPHB1: view

SIGNOR curated interactions for EPHB1 Gene

Is activated by:

Gene Ontology (GO) - Biological Process for EPHB1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001525 angiogenesis IDA 9499402
GO:0001771 immunological synapse formation IEA --
GO:0006468 protein phosphorylation IEA --
GO:0007155 cell adhesion IEA --
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEA --
genes like me logo Genes that share ontologies with EPHB1: view

Drugs & Compounds for EPHB1 Gene

(2) Drugs for EPHB1 Gene - From: HMDB and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
ATP Nutra Agonist 0

(2) Additional Compounds for EPHB1 Gene - From: Novoseek and HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
ADP
  • Adenosindiphosphorsaeure
  • Adenosine 5'-pyrophosphate
  • Adenosine diphosphate
  • Adenosine pyrophosphate
  • Adenosine-5'-diphosphate
Full agonist, Agonist 58-64-0
genes like me logo Genes that share compounds with EPHB1: view

Transcripts for EPHB1 Gene

Unigene Clusters for EPHB1 Gene

EPH receptor B1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for EPHB1
  • Applied Biological Materials Clones for EPHB1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for EPHB1 Gene

No ASD Table

Relevant External Links for EPHB1 Gene

GeneLoc Exon Structure for
EPHB1
ECgene alternative splicing isoforms for
EPHB1

Expression for EPHB1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for EPHB1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for EPHB1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x6.0) and Brain - Cerebellum (x4.6).

Protein differential expression in normal tissues from HIPED for EPHB1 Gene

This gene is overexpressed in Lavage (58.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for EPHB1 Gene



NURSA nuclear receptor signaling pathways regulating expression of EPHB1 Gene:

EPHB1

SOURCE GeneReport for Unigene cluster for EPHB1 Gene:

Hs.116092

mRNA Expression by UniProt/SwissProt for EPHB1 Gene:

P54762-EPHB1_HUMAN
Tissue specificity: Preferentially expressed in brain.

Evidence on tissue expression from TISSUES for EPHB1 Gene

  • Nervous system(4.9)
  • Kidney(4.1)
  • Eye(2)
genes like me logo Genes that share expression patterns with EPHB1: view

Primer Products

No data available for Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for EPHB1 Gene

Orthologs for EPHB1 Gene

This gene was present in the common ancestor of animals.

Orthologs for EPHB1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia EPHB1 33 34
  • 99.73 (n)
oppossum
(Monodelphis domestica)
Mammalia EPHB1 34
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia EPHB1 33 34
  • 93.09 (n)
dog
(Canis familiaris)
Mammalia EPHB1 33 34
  • 92.92 (n)
rat
(Rattus norvegicus)
Mammalia Ephb1 33
  • 91.57 (n)
mouse
(Mus musculus)
Mammalia Ephb1 33 16 34
  • 91.33 (n)
chicken
(Gallus gallus)
Aves EPHB1 33 34
  • 84.42 (n)
lizard
(Anolis carolinensis)
Reptilia EPHB1 34
  • 93 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia ephb1 33
  • 78.8 (n)
Str.11068 33
African clawed frog
(Xenopus laevis)
Amphibia Xl.1028 33
zebrafish
(Danio rerio)
Actinopterygii EPHB1 34
  • 85 (a)
OneToOne
ephb1 33
  • 76.68 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP000489 33
  • 54.65 (n)
fruit fly
(Drosophila melanogaster)
Insecta Eph 35 33 34
  • 49.39 (n)
hop 35
  • 38 (a)
worm
(Caenorhabditis elegans)
Secernentea T25B9.5 35
  • 34 (a)
F59A3.8 35
  • 33 (a)
old-1 35
  • 33 (a)
old-2 35
  • 33 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 44 (a)
ManyToMany
CSA.7809 34
  • 43 (a)
ManyToMany
-- 34
  • 42 (a)
ManyToMany
CSA.1664 34
  • 39 (a)
ManyToMany
Species where no ortholog for EPHB1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for EPHB1 Gene

ENSEMBL:
Gene Tree for EPHB1 (if available)
TreeFam:
Gene Tree for EPHB1 (if available)

Paralogs for EPHB1 Gene

Variants for EPHB1 Gene

Sequence variations from dbSNP and Humsavar for EPHB1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
VAR_042167 An ovarian undifferentiated carcinoma sample
VAR_042168 A gastric adenocarcinoma sample
VAR_042169 A gastric adenocarcinoma sample
rs1000003446 -- 135,200,344(+) TAGGA(A/G)AGAGG intron-variant
rs1000011060 -- 135,067,408(+) TTAAT(G/T)GAGTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for EPHB1 Gene

Variant ID Type Subtype PubMed ID
dgv2606n106 CNV deletion 24896259
dgv939e214 CNV gain 21293372
esv22232 CNV loss 19812545
esv2309200 CNV deletion 18987734
esv2421444 CNV deletion 20811451
esv2490314 CNV deletion 19546169
esv2660214 CNV deletion 23128226
esv2663866 CNV deletion 23128226
esv2677066 CNV deletion 23128226
esv2725955 CNV deletion 23290073
esv2760811 CNV loss 21179565
esv2833680 CNV deletion 24192839
esv29010 CNV gain 19812545
esv3562589 CNV deletion 23714750
esv3562592 CNV deletion 23714750
esv3597860 CNV loss 21293372
esv3597861 CNV gain 21293372
esv3597864 CNV gain 21293372
esv3597865 CNV gain 21293372
esv3597866 CNV loss 21293372
esv3597867 CNV gain 21293372
esv3597868 CNV gain 21293372
esv991539 CNV deletion 20482838
nsv1000277 CNV gain 25217958
nsv1074627 CNV deletion 25765185
nsv1145941 CNV duplication 26484159
nsv1148781 CNV deletion 26484159
nsv4020 CNV insertion 18451855
nsv436394 CNV deletion 17901297
nsv441840 CNV loss 18776908
nsv460859 CNV loss 19166990
nsv478891 CNV novel sequence insertion 20440878
nsv508956 CNV insertion 20534489
nsv513075 CNV loss 21212237
nsv514169 CNV loss 21397061
nsv519871 CNV loss 19592680
nsv520932 CNV loss 19592680
nsv818168 CNV loss 17921354
nsv822262 CNV loss 20364138
nsv829731 CNV loss 17160897

Variation tolerance for EPHB1 Gene

Residual Variation Intolerance Score: 5.11% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.09; 38.17% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for EPHB1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
EPHB1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for EPHB1 Gene

Disorders for EPHB1 Gene

Relevant External Links for EPHB1

Genetic Association Database (GAD)
EPHB1
Human Genome Epidemiology (HuGE) Navigator
EPHB1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
EPHB1

No disorders were found for EPHB1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for EPHB1 Gene

Publications for EPHB1 Gene

  1. cDNA cloning, molecular characterization, and chromosomal localization of NET(EPHT2), a human EPH-related receptor protein-tyrosine kinase gene preferentially expressed in brain. (PMID: 8666391) Tang XX … Ikegaki N (Genomics 1995) 2 3 4 22 60
  2. Ligand binding induces Cbl-dependent EphB1 receptor degradation through the lysosomal pathway. (PMID: 18034775) Fasen K … Huynh-Do U (Traffic (Copenhagen, Denmark) 2008) 3 4 22 60
  3. EphB1 recruits c-Src and p52Shc to activate MAPK/ERK and promote chemotaxis. (PMID: 12925710) Vindis C … Huynh-Do U (The Journal of cell biology 2003) 3 4 22 60
  4. The kinase-null EphB6 receptor undergoes transphosphorylation in a complex with EphB1. (PMID: 11713248) Freywald A … Roifman CM (The Journal of biological chemistry 2002) 3 4 22 60
  5. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3 45 60

Products for EPHB1 Gene

  • Addgene plasmids for EPHB1

Sources for EPHB1 Gene

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