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Aliases for GPR183 Gene

Aliases for GPR183 Gene

  • G Protein-Coupled Receptor 183 2 3
  • EBV-Induced G-Protein Coupled Receptor 2 2 3 4
  • EBI2 3 4 6
  • Epstein-Barr Virus Induced Gene 2 (Lymphocyte-Specific G Protein-Coupled Receptor) 2 3
  • Epstein-Barr Virus-Induced G-Protein Coupled Receptor 2 3 4
  • G-Protein Coupled Receptor 183 3

External Ids for GPR183 Gene

Previous HGNC Symbols for GPR183 Gene

  • EBI2

Previous GeneCards Identifiers for GPR183 Gene

  • GC13M098745
  • GC13M099946
  • GC13M080541

Summaries for GPR183 Gene

Entrez Gene Summary for GPR183 Gene

  • This gene was identified by the up-regulation of its expression upon Epstein-Barr virus infection of primary B lymphocytes. This gene is predicted to encode a G protein-coupled receptor that is most closely related to the thrombin receptor. Expression of this gene was detected in B-lymphocyte cell lines and lymphoid tissues but not in T-lymphocyte cell lines or peripheral blood T lymphocytes. The function of this gene is unknown. [provided by RefSeq, Jul 2008]

GeneCards Summary for GPR183 Gene

GPR183 (G Protein-Coupled Receptor 183) is a Protein Coding gene. Among its related pathways are GPCRs, Other. GO annotations related to this gene include G-protein coupled receptor activity and oxysterol binding. An important paralog of this gene is PTAFR.

UniProtKB/Swiss-Prot for GPR183 Gene

  • Receptor for oxysterol 7-alpha,25-dihydroxycholesterol (7-alpha,25-OHC) and other related oxysterols. Binding of 7-alpha,25-OHC mediates the correct localization of B-cells during humoral immune responses. Promotes activated B-cell localization in the outer follicle and interfollicular regions. Its specific expression during B-cell maturation helps position B-cells appropriately for mounting T-dependent antibody responses (By similarity). Signals constitutively through G(i)-alpha, but not through G(s)-alpha or G(q)-alpha. Signals constitutively also via MAPK1/3 (ERK1/2).

Gene Wiki entry for GPR183 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GPR183 Gene

Genomics for GPR183 Gene

Regulatory Elements for GPR183 Gene

Genomic Location for GPR183 Gene

Start:
99,294,530 bp from pter
End:
99,307,495 bp from pter
Size:
12,966 bases
Orientation:
Minus strand

Genomic View for GPR183 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for GPR183 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GPR183 Gene

Proteins for GPR183 Gene

  • Protein details for GPR183 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P32249-GP183_HUMAN
    Recommended name:
    G-protein coupled receptor 183
    Protein Accession:
    P32249
    Secondary Accessions:
    • B2R8N5
    • Q53F99
    • Q5JUH7

    Protein attributes for GPR183 Gene

    Size:
    361 amino acids
    Molecular mass:
    41224 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • GSK682753A (8-[(2E)-3-(4-chlorophenyl)prop-2-enoyl]-3-[(3,4-dichlorophenyl)methyl]-1-oxa-3,8-diazaspiro[4.5]decan-2-one), an inverse agonist, selectively inhibits the constitutive activity of GPR183 with high potency and efficacy.

neXtProt entry for GPR183 Gene

Proteomics data for GPR183 Gene at MOPED

Post-translational modifications for GPR183 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for GPR183 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for GPR183 Gene

Domains for GPR183 Gene

Gene Families for GPR183 Gene

HGNC:
  • GPCRAO :GPCR / Class A : Orphans
IUPHAR :

Protein Domains for GPR183 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for GPR183 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P32249

UniProtKB/Swiss-Prot:

GP183_HUMAN :
  • P32249
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with GPR183: view

Function for GPR183 Gene

Molecular function for GPR183 Gene

UniProtKB/Swiss-Prot Function: Receptor for oxysterol 7-alpha,25-dihydroxycholesterol (7-alpha,25-OHC) and other related oxysterols. Binding of 7-alpha,25-OHC mediates the correct localization of B-cells during humoral immune responses. Promotes activated B-cell localization in the outer follicle and interfollicular regions. Its specific expression during B-cell maturation helps position B-cells appropriately for mounting T-dependent antibody responses (By similarity). Signals constitutively through G(i)-alpha, but not through G(s)-alpha or G(q)-alpha. Signals constitutively also via MAPK1/3 (ERK1/2).
UniProtKB/Swiss-Prot Induction: By Epstein-Barr virus (EBV).

Gene Ontology (GO) - Molecular Function for GPR183 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004930 G-protein coupled receptor activity IEA --
GO:0008142 oxysterol binding IDA 21796212
genes like me logo Genes that share ontologies with GPR183: view

Phenotypes for GPR183 Gene

genes like me logo Genes that share phenotypes with GPR183: view

Animal Models for GPR183 Gene

MGI Knock Outs for GPR183:

Animal Model Products

CRISPR Products

miRNA for GPR183 Gene

miRTarBase miRNAs that target GPR183

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for GPR183

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targeting and HOMER Transcription for GPR183 Gene

Localization for GPR183 Gene

Subcellular locations from UniProtKB/Swiss-Prot for GPR183 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for GPR183 Gene COMPARTMENTS Subcellular localization image for GPR183 gene
Compartment Confidence
plasma membrane 5
nucleus 1

Gene Ontology (GO) - Cellular Components for GPR183 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IDA 21673108
GO:0005887 integral component of plasma membrane TAS 8383238
GO:0016021 integral component of membrane --
genes like me logo Genes that share ontologies with GPR183: view

Pathways for GPR183 Gene

SuperPathways for GPR183 Gene

Superpath Contained pathways
1 GPCRs, Other
genes like me logo Genes that share pathways with GPR183: view

Pathways by source for GPR183 Gene

1 BioSystems pathway for GPR183 Gene

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays
    • G Protein Coupled Receptors 384HT in human,mouse,rat

Interacting Proteins for GPR183 Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000365596%0d%0a9606.ENSP00000344818%0d%0a9606.ENSP00000333633%0d%0a
Selected Interacting proteins: P32249-GP183_HUMAN ENSP00000365596 for GPR183 Gene via MINT STRING I2D

Gene Ontology (GO) - Biological Process for GPR183 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002313 mature B cell differentiation involved in immune response ISS --
GO:0006955 immune response TAS 8383238
GO:0006959 humoral immune response ISS --
GO:0007186 G-protein coupled receptor signaling pathway IDA 21673108
GO:0030890 positive regulation of B cell proliferation IDA 21673108
genes like me logo Genes that share ontologies with GPR183: view

Compounds for GPR183 Gene

(8) IUPHAR Ligand for GPR183 Gene

Ligand Type Action Affinity Pubmed IDs
7alpha,25-dihydroxycholesterol Agonist Full agonist 9.85
7alpha,27-dihydroxycholesterol Agonist Agonist 8.89
7beta, 25-dihydroxycholesterol Agonist Agonist 8.68
7beta, 27-dihydroxycholesterol Agonist Agonist 7.29
27-hydroxycholesterol Agonist Agonist 7.15
7alpha-hydroxycholesterol Agonist Agonist 7.09
7beta-hydroxycholesterol Agonist Agonist 5.75
25-hydroxycholesterol Agonist Agonist
genes like me logo Genes that share compounds with GPR183: view

Transcripts for GPR183 Gene

mRNA/cDNA for GPR183 Gene

(90) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for GPR183 Gene

G protein-coupled receptor 183:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for GPR183

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for GPR183 Gene

No ASD Table

Relevant External Links for GPR183 Gene

GeneLoc Exon Structure for
GPR183
ECgene alternative splicing isoforms for
GPR183

Expression for GPR183 Gene

mRNA expression in normal human tissues for GPR183 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for GPR183 Gene

This gene is overexpressed in Whole Blood (6.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for GPR183 Gene

SOURCE GeneReport for Unigene cluster for GPR183 Gene Hs.784

mRNA Expression by UniProt/SwissProt for GPR183 Gene

P32249-GP183_HUMAN
Tissue specificity: Expressed abundantly in lymphoid tissues such as spleen and lymph node, and in B- and T-lymphocytes. Also highly expressed in lung, heart and gastrointestinal tract, and weakly expressed in the urogenital system and brain.
genes like me logo Genes that share expressions with GPR183: view

In Situ Assay Products

Orthologs for GPR183 Gene

This gene was present in the common ancestor of chordates.

Orthologs for GPR183 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia GPR183 35
  • 99.82 (n)
  • 99.72 (a)
GPR183 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia GPR183 36
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia GPR183 35
  • 90.44 (n)
  • 90.53 (a)
GPR183 36
  • 90 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gpr183 35
  • 81.89 (n)
  • 87.96 (a)
Gpr183 16
Gpr183 36
  • 88 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia GPR183 36
  • 81 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia GPR183 36
  • 77 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Gpr183 35
  • 81.14 (n)
  • 87.96 (a)
chicken
(Gallus gallus)
Aves GPR183 35
  • 71.41 (n)
  • 70.35 (a)
GPR183 36
  • 67 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia GPR183 36
  • 60 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC101731463 35
  • 64.51 (n)
  • 65.88 (a)
zebrafish
(Danio rerio)
Actinopterygii gpr183 35
  • 57.39 (n)
  • 56.29 (a)
gpr183 36
  • 52 (a)
OneToMany
GPR183 (2 of 3) 36
  • 47 (a)
OneToMany
GPR183 (3 of 3) 36
  • 47 (a)
OneToMany
Species with no ortholog for GPR183:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for GPR183 Gene

ENSEMBL:
Gene Tree for GPR183 (if available)
TreeFam:
Gene Tree for GPR183 (if available)

Paralogs for GPR183 Gene

Pseudogenes.org Pseudogenes for GPR183 Gene

genes like me logo Genes that share paralogs with GPR183: view

Variants for GPR183 Gene

Sequence variations from dbSNP and Humsavar for GPR183 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
VAR_054147 An acute myeloid leukemia sample

Relevant External Links for GPR183 Gene

HapMap Linkage Disequilibrium report
GPR183

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for GPR183 Gene

Disorders for GPR183 Gene

No disorders were found for GPR183 Gene.

No data available for UniProtKB/Swiss-Prot for GPR183 Gene

Publications for GPR183 Gene

  1. Epstein-Barr virus-induced genes: first lymphocyte-specific G protein-coupled peptide receptors. (PMID: 8383238) Birkenbach M.P. … Kieff E. (J. Virol. 1993) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Molecular pharmacological phenotyping of EBI2. An orphan seven- transmembrane receptor with constitutive activity. (PMID: 16540462) Rosenkilde M.M. … Schwartz T.W. (J. Biol. Chem. 2006) 3 4
  4. Ligand modulation of the Epstein-Barr virus-induced seven- transmembrane receptor EBI2: identification of a potent and efficacious inverse agonist. (PMID: 21673108) Benned-Jensen T. … Rosenkilde M.M. (J. Biol. Chem. 2011) 3 4
  5. Oxysterols direct immune cell migration via EBI2. (PMID: 21796212) Hannedouche S. … Sailer A.W. (Nature 2011) 3 4

Products for GPR183 Gene

Sources for GPR183 Gene

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